New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 3885033 =56 (1.070)4 (0.080) 4/240 NT 6.5% coding (874/1617 nt) PP_3429 two component system response regulator/sensor histidine kinase
?NC_002947 3885081 = 60 (1.170)coding (922/1617 nt) PP_3429 two component system response regulator/sensor histidine kinase

GCCTGAGCCCGTCGATAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGCGCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTGCGCACTGGCGACTATGTGCGCCTGCGAATCACCGACAGCGGCCAAGGCATGGCGCAAAGCACGCTGGAGCACGCCTTCGAACCCTTCTTCAGCACCAAGGCG  >  NC_002947/3884932‑3885230
                                                                                                                                                     |                                                                                                                                                     
gccatgccttggccgctgtcggtgattcgcaggcgcacatagtcgccagtgcgcaaagcgccgtcagcagcttgctcggtggcgatgtgatgattgttcgcCTCAATGCGCGCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAgg                                                                                                                                                       >  1:365112‑M1/102‑150 (MQ=255)
gCCTGAGCCCGTCGATAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGCGCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAgg                                                                                                                                                       >  2:880888/1‑150 (MQ=255)
 ccTGAGCCCGTCGATAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGCGCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGc                                                                                                                                                      <  1:1230021/150‑1 (MQ=255)
   tGAGCCCGTCGATAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGCGCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGa                                                                                                                                                    <  1:1265654/150‑1 (MQ=255)
    gAGCCCGTCGATAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGCGCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGaa                                                                                                                                                   <  1:343451/150‑1 (MQ=255)
         cGTCGATAACCCTGCAAGTGCACACGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGCGCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAatc                                                                                                                                              <  2:1079943/150‑1 (MQ=255)
           tCGATAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGCGCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAatcat                                                                                                                                            <  2:122201/150‑1 (MQ=255)
              aTAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGCGCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAgg                                                                                                                                                       >  2:436158/1‑136 (MQ=255)
              aTAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGCGCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAgg                                                                                                                                                       <  1:436158/136‑1 (MQ=255)
                aaCCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGCGCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACAt                                                                                                                                       <  2:472530/150‑1 (MQ=255)
                   ccTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGCGCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGc                                                                                                                                    >  2:181348/1‑150 (MQ=255)
                     tGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGATGCCCTCGACAACCTGCTGCTCAATGCGCGCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGATGCGAACAATCATCACATCGCCa                                                                                                                                  >  2:287907/1‑150 (MQ=255)
                         aGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGCGCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGa                                                                                                                              <  1:1088595/150‑1 (MQ=255)
                              aCGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGCGCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAg                                                                                                                         <  1:326661/150‑1 (MQ=255)
                              aCGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGCGCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAg                                                                                                                         <  1:880888/150‑1 (MQ=255)
                                      aaaGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGCGCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAatcat                                                                                                                                            >  1:616432/1‑123 (MQ=255)
                                      aaaGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGCGCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAatcat                                                                                                                                            <  2:616432/123‑1 (MQ=255)
                                          aCCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGCGCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGgcg                                                                                                             >  2:855470/1‑150 (MQ=255)
                                            cTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGCGCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCt                                                                                                           >  2:500812/1‑150 (MQ=255)
                                                  cccGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGCGCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTgcgc                                                                                                     >  2:1065156/1‑150 (MQ=255)
                                                   ccGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGGGCGAGGCCATGAAAAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTGCGCa                                                                                                    >  1:1242218/1‑150 (MQ=255)
                                                       ggAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGCGCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTGCGCACTgg                                                                                                <  1:303493/150‑1 (MQ=255)
                                                              gATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGCGCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTGCGCACTGGCGACTAt                                                                                         <  1:282099/150‑1 (MQ=255)
                                                                tGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGCGCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTGCGCACTGGCGACTAtgt                                                                                       >  2:1312430/1‑150 (MQ=255)
                                                                   ccAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGCGCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTGCGCACTGGCGACTAtgtgag                                                                                    >  1:466057/1‑148 (MQ=255)
                                                                   ccAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGCGCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTGCGCACTGGCGACTATGTgcg                                                                                    >  1:189757/1‑150 (MQ=255)
                                                                   ccAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGCGCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTGCCCACTGGCGACTATGTgcg                                                                                    >  2:317747/1‑150 (MQ=255)
                                                                    cagcagTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGCGCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTTCGCACTGGCGACTATGTgcgc                                                                                   >  2:233126/1‑150 (MQ=255)
                                                                    cagcagTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGCGCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTGCGCACTGGCGACTATGTgcgc                                                                                   >  1:510855/1‑150 (MQ=255)
                                                                      gcagTTGCAGGAGGCCCTCGACAAACTGCTGCTCAATGCGCGCGAGGCCATGCGCAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTGCGCACTGGCGACTATGTGCGCCt                                                                                 >  2:406466/1‑150 (MQ=255)
                                                                                 aggCCCTCGACAACCTGCTGCTCAATGCGCGCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGAAAGCTGCTGACGGCGCTTTGCGCACTGGCGACTATGTGCGCCTGCGAATCACCg                                                                      >  1:200394/1‑150 (MQ=255)
                                                                                    cccTCGACAACCTGCTGCTCAATGCGCGCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTGCGCACTGGCGACTATGTGCGCCTGCGAATCACCGACa                                                                   >  1:644804/1‑150 (MQ=255)
                                                                                     ccTCGACAACCTGCTGCTCAATGCGCGCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTGCGCAc                                                                                                   >  1:97786/1‑117 (MQ=255)
                                                                                     ccTCGACAACCTGCTGCTCAATGCGCGCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTGCGCAc                                                                                                   <  2:97786/117‑1 (MQ=255)
                                                                                     ccTCGACAACCTGCTGCTCAATGCGCGCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTGCGCACTGGCGACTATGTGCGCCTGCGAATCACCggaag                                                                  >  1:950958/1‑146 (MQ=255)
                                                                                            aaCCTGCTGCTCAATGCGCGCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTGCGCACTGGCGACTATGTGCGCCTGCGAATCACCGACAGCGGCCaa                                                           <  2:1242218/150‑1 (MQ=255)
                                                                                              ccTGCTGCTCAATGCGCGCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTGCGCACTGGCGACTATGTGCGCCTGCGAATCACCGACAGCGGCCAAgg                                                         >  2:68603/1‑150 (MQ=255)
                                                                                               ctgctgCTCAATGCGCGCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTGCGCACTGGCGACTATGTGCGCCTGCGAATCACCGACAGCGGCCAAGGc                                                        <  2:742902/150‑1 (MQ=255)
                                                                                               ctgctgCTCAATGCGCGCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTGCGCACTGGCGACTATGTGCGCCTGCGAATCACCGACAGCGGCCAAGGc                                                        >  1:829650/1‑150 (MQ=255)
                                                                                                    gctCAATGCGCGCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATACCATCTCCACCGAGCAAGCTGCTGACGGCGCTTTGCGCACTGGCGACTATGTGCGCCTGCGAATCACCGACAGCGGCCAAGGCATGgc                                                   <  2:1113589/150‑1 (MQ=255)
                                                                                                    cctcgatgcgtagcaggccaccgttgggcatggcctcgcgcgcattgagGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTGCGCACTGGCGACTATGTGCGCCTGCGAATCACCGACAGCGGCCAAGGCATGgc                                                   >  1:365112‑M2/50‑150 (MQ=255)
                                                                                                     ctcgatgcgtagcaggccaccgttgggcatggcctcgcgcgcattgagGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTGCGCACTGGCGACTATGTGCGCCTGCGAATCACCGACAGCGGCCAAGGCATGgcg                                                  >  1:480717‑M2/49‑150 (MQ=255)
                                                                                                     CTCAATGCGCGCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTGCGCACTGGCGACTATGTGCGCCTGCGAATCACCGACAGCGGCCAAGGCATGgcg                                                  <  1:612693‑M1/150‑1 (MQ=255)
                                                                                                      TCAATGCGCGCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTGCGCACTGGCGACTATGTGCGCCTGCGAATCACCGACAGCGGCCAAGGCATGgcgc                                                 <  1:1063417‑M1/150‑1 (MQ=255)
                                                                                                       CAATGCGCGCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAGCAATCATCACATCGCCACCGAGCAAGATGCTGACGGCGCTTTGCGCACTGGCGACTATGTGCGCCTGCGAATCACCGACAGCGGCCAAGGCATGGCGCa                                                <  2:1324444‑M1/150‑1 (MQ=255)
                                                                                                        aaTGCGCGCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTGCGCACTGGCGACTATGTGCGCCTGCGAATCACCGACAGCGGCCAAGGCATGGCGCaa                                               >  2:1109826/1‑150 (MQ=255)
                                                                                                         atgcgtagcaggccaccgttgggcatggcctcgcgcgcattgagGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTGCGCACTGGCGACTATGTGCGCCTGCGAATCACCGACAGCGGCCAAGGCATGGCGCaaa                                              <  2:480717‑M2/106‑1 (MQ=255)
                                                                                                           gcgtagcaggccaccgttgggcatggcctgctacgcatcgagGCGAACAATCATCACATCGCCACCGAGCAAGCTGTTGACGGCGCTTTGCGCACTGGCGACTATGTGCGCCTGCGAATCACCGACAGCGGCCAAGGCATGGCGCAAAGc                                            >  2:628296‑M2/43‑150 (MQ=255)
                                                                                                                   ggCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTGCGCACTGGCGACTATGTGCGCCTGCGAATCACCGACAGCGGCCAAGGCATGGCGCAAAGCACGCTGGa                                    >  1:954218/1‑150 (MQ=255)
                                                                                                                     ccATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTGCGCACTGGCGACTATGTGCGCCTGCGAATCACCGACAGCGGCCAAGGCATGGCGCAAAGCACGCTGGAGc                                  >  2:400363/1‑150 (MQ=255)
                                                                                                                      cATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTGCGCACTGGCGACTATGTGCGCCTGCGAATCACCGACAGCGGCCAAGGCATGGCGCAAAGCACGCTGGAGCa                                 >  1:1087891/1‑150 (MQ=255)
                                                                                                                      cATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTGCGCACTGGCGACTATGTGCGCCTGCGAATCACCGACAGCGGCCAAGGCATGGCGCAAAGCACGCTGGAGCa                                 >  2:1371123/1‑150 (MQ=255)
                                                                                                                       aTGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTGCGCACTGGCGACTATGTGCGCCTGCGAATCACCGACAGCGGCCAAGGCATGGCGCAAAGCACGCTGGAGCAc                                <  1:68603/150‑1 (MQ=255)
                                                                                                                         gCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTGCGCACTGGCGACTATGTGCGCCTGCGAATCACCGACAGCGGCCAAGGCATGGCGCAAAGCACGCTGGAGCACGc                              <  1:181348/150‑1 (MQ=255)
                                                                                                                          cccAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTGCGCACTGGCGACTATGTGCGCCTGCGAATCACCGACAGCGGCCAAGGCATGGCGCAAAGCACGCTGGAGCACGcc                             >  1:660330/1‑150 (MQ=255)
                                                                                                                           ccAACGTTGTCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTGCGCACTGGCGACTATGTGCGCCTGCGAATCACCGACAGCGGCCAAGGCATGGCGCAAAGCACGCTGGAGCACGCCt                            >  2:1422391/1‑150 (MQ=255)
                                                                                                                            cAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTGCGCACTGGCGACTATGTGCGCCTGCGAATCACCGACa                                                                   >  2:1395760/1‑110 (MQ=255)
                                                                                                                            cAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTGCGCACTGGCGACTATGTGCGCCTGCGAATCACCGACa                                                                   <  1:1395760/110‑1 (MQ=255)
                                                                                                                             aaCGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTGCGCACTGGCGACTATGTGCGCCTGCGAATCACCGACAGCGGCCAAGGCATGGCGCAAAGCACGCTGGAGCACGCCTTc                          <  2:510855/150‑1 (MQ=255)
                                                                                                                               cGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTGCGCACTGGCGACTATGTGCGCCTGCGAATCACCGACAGCGGCCAAGGCATGGCGCACAGCACGCTGGAGCACGCCTTCGa                        >  1:595563/1‑150 (MQ=255)
                                                                                                                                ggTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTGCGCACTGGCGACTATGTGCGCCTGCGAATCACCGACAGCGGCCAAGGCATGGCGCAAAGCACGCTGGAGCACGCCTTTGaa                       <  2:1063417/150‑1 (MQ=255)
                                                                                                                                ggTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTGCGCACTGGCGACTATGTGCGCCTGCGAATCACCGACAGCGGCCAAGGCATGGCGCAAAGCACGCTGGAGCACGCCTTCGaa                       <  1:1371123/150‑1 (MQ=255)
                                                                                                                                ggTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTGCGCACTGGCGACTATGTGCGCCTGCGAATCACCGACAGCGGCCAAGGCATGGCGCAAAGCACGCTGGAGCACGCCTTCGaa                       <  1:1109826/150‑1 (MQ=255)
                                                                                                                                 gTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTGCGCACTGGCGACTATGTGCGCCTGCGAATCAcc                                                                       >  2:962727/1‑101 (MQ=255)
                                                                                                                                 gTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTGCGCACTGGCGACTATGTGCGCCTGCGAATCAcc                                                                       <  1:962727/101‑1 (MQ=255)
                                                                                                                                  tGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTGCGCACTGGCGACTATGTGCGCCTGCGAAt                                                                           >  2:316401/1‑96 (MQ=255)
                                                                                                                                  tGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTGCGCACTGGCGACTATGTGCGCCTGCGAAt                                                                           <  1:316401/96‑1 (MQ=255)
                                                                                                                                  tGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTGCGCACTGGCGACTATGTGCGCCTGCGAATCACCGACAGCGGCCAAGGCATGGCGCAAAGCACGCTGGAGCACGCCTTCGAAcc                     >  1:1088173/1‑150 (MQ=255)
                                                                                                                                     ccTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCGGCTGACGGCGCTTTGCGCACTGGCGACTATGTGCGCCTGCGAATCACCGACAGCGGCCAAGGCATGGCGCAAAGCACGCTGGAGCACGCCTTCGAACCctt                  <  2:954218/150‑1 (MQ=255)
                                                                                                                                       tGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTGCGCACTGGCGACTATGTGCGCCTGCGAATCACCGACAGCGGCCAAGGCATGGCGCAAAGCACGCTGGAGCACGCCTTCGAACCcttct                >  1:498260/1‑150 (MQ=255)
                                                                                                                                       tGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTGCGCACTGGCGACTATGTGCGCCTGCGAATCACCGACAGCGGCCAAGGCATGGCGCAAAGCACGCTGGAGCACGCCTTCGAACCcttct                >  1:682835/1‑150 (MQ=255)
                                                                                                                                         cTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGTTGACGGCGCTTTGCGCACTGGCGACTATGTGCGCCTGCGAATCACCGACAGCGGCCAAGGCATGGCGCAAAGCACGCTGGAGCACGCCTTCGAACCCttcttc              <  1:628296/150‑1 (MQ=255)
                                                                                                                                         cTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTGCGCACTGGCGACTATGTGCGCCTGCGAATCACCGACAGCGGCCAAGGCATGGCGCAAAGCACGCTGGAGCACGCCTTCGAACCCttcttc              <  2:682835/150‑1 (MQ=255)
                                                                                                                                          tACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTGCGCACTGGCGACTATGTGCGCCTGCGAATCACCGACAGCGGCCAAGGCATGGCGCAAAGCACGCTGGAGCACGCCTTCGAACCCTTCTTCa             <  1:1312430/150‑1 (MQ=255)
                                                                                                                                             gCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTGCGCACTGGCGACTATGTGCGCCTGCGAATCACCGACAGCGGCCaa                                                           <  2:1035466/101‑1 (MQ=255)
                                                                                                                                             gCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTGCGCACTGGCGACTATGTGCGCCTGCGAATCACCGACAGCGGCCaa                                                           >  1:1035466/1‑101 (MQ=255)
                                                                                                                                                  gagGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTGCGCACTGGCGACTATGTGCGCCTGCGAATCACCGACAGCGGCCAAGGCATGGCGCAAAGCACGCTGGAGCACGCCTTCGAACCCTTCTTCAGCACCAAg     >  1:1067267‑M2/4‑150 (MQ=255)
                                                                                                                                                     gCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTGCGCACTGGCGACTATGTGCGCCTGCGAATCACCGACAGCGGCCAAGGCATGGGGCAAAGCACGCTGGAGCACGCCTTCGAACCCTTCTTCAGCACCAAGGCg  >  1:796768/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
GCCTGAGCCCGTCGATAACCCTGCAAGTGCACGCGGCCAAAGACCTGTGGCCCGTGGAGGCGGATGACCAGCAGTTGCAGGAGGCCCTCGACAACCTGCTGCTCAATGCGCGCGAGGCCATGCCCAACGGTGGCCTGCTACGCATCGAGGCGAACAATCATCACATCGCCACCGAGCAAGCTGCTGACGGCGCTTTGCGCACTGGCGACTATGTGCGCCTGCGAATCACCGACAGCGGCCAAGGCATGGCGCAAAGCACGCTGGAGCACGCCTTCGAACCCTTCTTCAGCACCAAGGCG  >  NC_002947/3884932‑3885230

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.