New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5295536 =	67 (1.270)	5 (0.100)	5/232	NT	8.4%	intergenic (+19/+107)	PP_4668/PP_4669	LysR family transcriptional regulator/OmpA family protein
	?	NC_002947	5295619 =	46 (0.930)					intergenic (+102/+24)	PP_4668/PP_4669	LysR family transcriptional regulator/OmpA family protein

TGTATTGCCGGGAGGATTTGCGCAAGTTGAAGCGCATTACCCTGCTGTGGGATTACATCCGCGGGGTGACCGAGGCGAATGCGCCGTTGTTGATGGGGCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCCGCGCCTACAGGGGGCTATGTGACAGCCCGAGCGGCGACGATCAGTAGGACGCTACCACGATGGACACCCGACGGTTCTCGGT  >  NC_002947/5295387‑5295684                                                                                                                                                      |                                                                                                                                                     ttggcatgcaggcacagaacattcagagccgtggcctgggcagcagccagccggtggcggacaaccgcaccagcgccgggcgtaccgagaaccgtcgggtgtccatcgtggtagcgtcctactgatcgtcgccgctcgggctgtcacata                                                                                                                                                      >  1:132784‑M1/150‑150 (MQ=255) tGTATTGCCGGGAGGATTTGCGCAAGTTGAAGCGCATTACCCTGCTGTGGGATTACATCCGCGGGGTGACCGAGGCGAATGCGCCGTTGTTGATGGGGCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGa                                                                                                                                                      <  1:42958/150‑1 (MQ=255) tGTATTGCCGGGAGGATTTGCGCAAGTTGAAGCGCATTACCCTGCTGTGGGATTACATCCGCGGGGTGACCGAGGCGAATGCGCCGTTGTTGATGGGGCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGa                                                                                                                                                      <  2:1126483/150‑1 (MQ=255)    gcatgcaggcacagaacattcagagccgtggcctgggcagcagccagccggtggcggacaaccgcaccagcgccgggcgtaccgagaaccgtcgggtgtccatcgtggtagcgtcctactgatcgtcgccgctcgggctgtcacatAGcc                                                                                                                                                   <  1:899527‑M1/4‑1 (MQ=255)     ttGCCGGGAGGATTTGCGCAAGTTGAAGCGCATTACCCTGCTGTGGGATTACATCCGCGGGGTGACCGAGGCGAATGCGCCGTTGTTGATGGGGCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGccc                                                                                                                                                  >  2:1349387/1‑150 (MQ=255)           gtattaTTTTCGCAAGTTGAAGCGCATTACCCTGCTGTGGGATTACATCCGCGGGGTGACCGAGGCGAATGCGCCGTTGTTGATGGGGCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGt                                                                                                                                            <  1:1003131/145‑1 (MQ=255)           ggaggaTTTGCGCAAGTTGAAGCGCATTACCCTGCTGTGGGATTACATCCGCGGGGTGACCGAGGCGAATGCGCCGTTGTTGATGGGGCAAACCCGCGAGATGCGCTCTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGt                                                                                                                                            <  2:1330739/150‑1 (MQ=255)                 tttGCGCAAGTTGAAGCGCATTACCCTGCTGTGGGATTACATCCGCGGGGTGACCGAGGCGAATGCGCCGTTGTTGATGGGGCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGc                                                                                                                                      <  2:902131/150‑1 (MQ=255)                     cgcAAGTTGAAGCGCATTACCCTGCTGTGGGATTACATCCGCGGGGTGACCGAGGCGAATGCGCCGTTGTTGATGGGGCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGc                                                                                                                                  <  2:824504/150‑1 (MQ=255)                     cgcAAGTTGAAGCGCATTACCCTGCTGTGGGATTACATCCGCGGGGTGACCGAGGCGAATGCGCCGTTGTTGATGGGGCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGc                                                                                                                                  >  1:935248/1‑150 (MQ=255)                      ccAAGTTGAAGGGCATTACCCTGCTGTGGGATAACATCCGCGGGGTGACCGAGACGAATGCGCCGATGTTGATGGGGCAAACCCGCGAGATGCGCTTTGCCGAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGCAGCGGGCt                                                                                                                                 >  2:297586/2‑150 (MQ=255)                                   cATTACCCTGCTGTGGGATTACATCCGCGGGGTGACCGAGGCGAATGCGCCGTTGTTGATGGGGCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAacac                                                                                                                    <  1:853181/150‑1 (MQ=255)                                   cATTACCCTGCTGTGGGATTACATCCGCGGGGTGACCGAGGCGAATGCGCCGTTGTTGATGGGGCAAACCCGCGAGATGCGCTTTGCACAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAacac                                                                                                                    >  2:811676/1‑150 (MQ=255)                                      tttccTGCTGTGGGATTACATCCGCGGGGTGACCGAGGCGAATGCGCCGTTGTTGATGGGGCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCgg                                                                                                                 <  1:1059355/147‑1 (MQ=255)                                      tACCCTGCTGTGGGATTACATCCGCGGGGTGACCGAGGCGAATGCGCCGTTGTTGATGGGGCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCgg                                                                                                                 >  1:224592/1‑150 (MQ=255)                                        cccTGCTGTGGGATTACATCCGCGGGGTGACCGAGGCGAATGCGCCGTTGTTGATGGGGCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCg                                                                                                               >  2:1266432/1‑150 (MQ=255)                                                tgGGATTACATCCGCGGGGTGACCGAGGCGAATGCGCCGTTGTTGATGGGGCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGt                                                                                                       <  2:826744/150‑1 (MQ=255)                                                  ggATTACATCCGCGGGGTGACCGAGGCGAATGCGCCGTTGTTGATGGGGCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGc                                                                                                     >  2:371539/1‑150 (MQ=255)                                                   gATTACATCCGCGGGGTGACCGAGGCGAATGCGCCGTTGTTGATGGGGCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGcc                                                                                                    >  2:1104825/1‑150 (MQ=255)                                                      tACATCCGCGGGGTGACCGAGGCGAATGCGCCGTTGTTGATGGGGCAAACCCGCGAGATGCGGTTTGCACAGCACTGCTAGCACTGCGCATTTCCGCGCCCCCCTGTAGCAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGa                                                                                                 <  1:811676/150‑1 (MQ=38)                                                         aTCCGCGGGGTGACCGAGGCGAATGCGCCGTTGTTGATGGGGCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGacac                                                                                              >  1:19946/1‑150 (MQ=255)                                                         aTCCGCGGGGTGACCGAGGCGAATGCGCCGTTGTTGATGGGGCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGaca                                                                                               >  2:465094/1‑149 (MQ=255)                                                         aTCCGCGGGGTGACCGAGGCGAATGCGCCGTTGTTGATGGGGCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGaca                                                                                               <  1:465094/149‑1 (MQ=255)                                                          tCCGCGGGGTGACCGAGGCGAATGCGCCGTTGTTGATGGGGCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCa                                                                                                   >  1:803738/1‑144 (MQ=255)                                                          tCCGCGGGGTGACCGAGGCGAATGCGCCGTTGTTGATGGGGCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCa                                                                                                   <  2:803738/144‑1 (MQ=255)                                                          tCCGCGGGGTGACCGAGGCGAATGCGCCGTTGTTGATGGGGCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACAcc                                                                                             >  2:205860/1‑150 (MQ=255)                                                           ccGCGGGGTGACCGAGGCGAATGCGCCGTTGTTGATGGGGCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACcg                                                                                            >  1:204913/1‑150 (MQ=255)                                                                gggTGACCGAGGCGAATGCGCCGTTGTTGATGGGGCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTg                                                                                       <  2:935248/150‑1 (MQ=255)                                                                   tGACCGAGGCGAATGCGCCGTTGTTGATGGGGCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGccc                                                                                    >  2:333431/1‑150 (MQ=255)                                                                   gcaccagcgccgggcgtaccgagaaccgtcgggtgtccatcgtggtagcgtcctactgatcgtcgccgctcgggctgtcacata                                                                                                                                                      <  2:1326004‑M1/1‑1 (MQ=255)                                                                   gcaccagcgccgggcgtaccgagaaccgtcgggtgtccatcgtggtagcgtcctactgatcgtcgccgctcgggctgtcacata                                                                                                                                                      >  1:1326004‑M1/84‑84 (MQ=255)                                                                         aGGCGAATGCGCCGTTGTTGATGGGGCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCCGCGCCt                                                                              <  1:371539/150‑1 (MQ=255)                                                                            cGAATGCGCCGTTGTTGATGGGGCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCCGCGCCTACa                                                                           <  2:1389419/150‑1 (MQ=255)                                                                            cGAATGCGCCGTTGTTGATGGGGCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCCGCGCCTACa                                                                           <  2:1391026/150‑1 (MQ=255)                                                                              aaTGCGCCGTTGTTGATGGGGCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCg                                                                                                                  >  2:545700/1‑109 (MQ=255)                                                                              aaTGCGCCGTTGTTGATGGGGCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCg                                                                                                                  <  1:545700/109‑1 (MQ=255)                                                                              aaTGCGCCGTTGTTGATGGGGCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCCGCGCCTACAgg                                                                         <  1:1349387/150‑1 (MQ=255)                                                                              aaTGCGCCGTTGTTGATGGGGCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAACCCGGTGCCATACACCGCGTTGCCCGCGCCTACAgg                                                                         <  1:113305/150‑1 (MQ=255)                                                                               ggcgtaccgagaaccgtcgggtgtccatcgtggtagcgtcctactgatcgtcgccgctcgggctgtcacatAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATACACCGCGTTGCCCGCGCCTACAggg                                                                        >  1:1328498‑M1/72‑150 (MQ=255)                                                                                   gcCGTTGTTGATGGGGCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCCGCGCCTACAGGGGGCt                                                                    >  2:44236/1‑150 (MQ=255)                                                                                   gcCGTTGTTGATGGGGCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCCGCGCCTACAGGGGGCt                                                                    >  2:4692/1‑150 (MQ=255)                                                                                    ccGTTGTTGATGGGGCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCCGCGCCTACAGGGGGCTa                                                                   >  2:316255/1‑150 (MQ=255)                                                                                     cGTTGTTGATGGGGCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCCGCGCCTACAGGGGGCTAt                                                                  <  1:1266432/150‑1 (MQ=255)                                                                                     cGTTGTTGATGGGGCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCCGCGCCTACAGGGGGCTAt                                                                  <  1:1104825/150‑1 (MQ=255)                                                                                     cGTTGTTGATGGGGCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCCGCGCCTACAGGGGGCTAt                                                                  <  1:487069/150‑1 (MQ=255)                                                                                            gATGGGGCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCCGCGCCTACAGGGGGCTAtgt                                                                <  1:782861/145‑1 (MQ=255)                                                                                            gATGGGGCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCCGCGCCTACAGGGGGCTAtgt                                                                >  2:782861/1‑145 (MQ=255)                                                                                             aTGGGGCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCCGCGCCTACAGGGGGCTATGTGACAGc                                                          >  2:544500/1‑150 (MQ=255)                                                                                             aTGGGGCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCCGCGCCTACAGGGGGCTATGTGACAGc                                                          <  1:44236/150‑1 (MQ=255)                                                                                             aTGGGGCAAACCCGCGAGATACGCTTTGCCCAGGACTGATGGTCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGAGAAGCCGGTGCCAGACACCGCGGTGCCCGCGCCTACAGGGGGCTATGTGACAGc                                                          >  2:448289/1‑150 (MQ=255)                                                                                                gggCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCACCATGTAGAAGAGGGCTTGCCCGCGAACACCGGCTAATCCGGTGCCAGACACCGCGTTGCCCGCGCCTACAGGGGGCTATGTGACAGCCCg                                                       >  2:871626/1‑150 (MQ=39)                                                                                                    aaaCCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGcc                                                                                                          >  1:703521/1‑95 (MQ=255)                                                                                                    aaaCCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGcc                                                                                                          <  2:703521/95‑1 (MQ=255)                                                                                                    aaaCCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCCGCGCCTACAGGGGGCTATGTGACa                                                            <  1:1114005/141‑1 (MQ=255)                                                                                                    aaaCCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCCGCGCCTACAGGGGGCTATGTGACa                                                            >  2:1114005/1‑141 (MQ=255)                                                                                                      tccatcgtggtagcgtcctactgatcgtcgccgctcgggctgtcacatAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCCGCGCCTa                                                                             <  2:1137140‑M1/74‑1 (MQ=255)                                                                                                      tccatcgtggtagcgtcctactgatcgtcgccgctcgggctgtcacatAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCCGCGCCTa                                                                             >  1:1137140‑M1/49‑122 (MQ=255)                                                                                                        ccGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCtt                                                                                                                                >  2:825991/1‑69 (MQ=255)                                                                                                        ccGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCtt                                                                                                                                <  1:825991/69‑1 (MQ=255)                                                                                                              gaTGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCCGCGCCTACAGGGGGCTATGTGACAGCCCGAGCGGCGACGATCa                                         <  2:1326292/150‑1 (MQ=255)                                                                                                                 gcgcTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCCGCGCCTACAGGGGGCTATGTGACAGCCCGAGCGGCGACGATCAGtg                                      <  1:205860/150‑2 (MQ=255)                                                                                                                    cTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCCGCGCCTACAGGGGGCTATGTGACAGCCCTATCGGCGACGATCAGTAGGa                                   <  2:204913/150‑1 (MQ=255)                                                                                                                       tGCCCAGCACTTTTGAGCCTGCGCTTTTCCGACCCCTCCTGTAGAAGCGGGCTTGCCGGCGAACACCGGCGAACCCGCTGCCATACTCCGCGTTGCCCGCGCCTACAGTGGGCTATGTGACAGCCCGAGCGGCGACGATCAGTATCACGc                                <  1:297586/150‑1 (MQ=255)                                                                                                                        tactgatcgtcgccgctcgggctgtcacatAGCCCCC‑TGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCCGCGCCTACAGGGGGc                                                                     >  1:32943‑M1/31‑111 (MQ=255)                                                                                                                        tactgatcgtcgccgctcgggctgtcacatAGCCCCC‑TGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCCGCGCCTACAGGGGGc                                                                     <  2:32943‑M1/81‑1 (MQ=255)                                                                                                                         cccAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCCGCGCCTACAGGGGGCTATGTGACAGCCCGAGCGGCGACGATCAGTAGGACGCTa                              >  1:496648/1‑150 (MQ=255)                                                                                                                            aGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCCGCGCCTACAGGGGGCTATGTGACAGCCCGAGCGGCGACGATCAGTa                                      >  1:628092/1‑139 (MQ=255)                                                                                                                            aGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCCGCGCCTACAGGGGGCTATGTGACAGCCCGAGCGGCGACGATCAGTa                                      <  2:628092/139‑1 (MQ=255)                                                                                                                                  gATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCa                                                                                                   <  2:1027934/72‑1 (MQ=255)                                                                                                                                  gATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCa                                                                                                   >  1:1027934/1‑72 (MQ=255)                                                                                                                                   aTGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCCGCGCCTACAGGGGGCTATGTGACAGCCCGAGCGGCGACGATCAGTAGGACGCTACCACGATGGa                    >  1:420730/1‑150 (MQ=255)                                                                                                                                     gggCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGtt                                                                                        >  2:1214219/1‑80 (MQ=255)                                                                                                                                     gggCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGtt                                                                                        <  1:1214219/80‑1 (MQ=255)                                                                                                                                     gggCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCCGCGCCTACAGGGGGCTATGTGACAGCCCGAGCGGCGACGATCAGTAGGACGCTACCACGATGGaca                  <  2:19946/150‑1 (MQ=255)                                                                                                                                           gcgcATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCCGCGCCTACAGGGGGCTATGTGACAGCCCGAGCGGCGACGATCAGTAGGACGCTACCACGATGGACACCCGAc            <  1:4692/150‑1 (MQ=255)                                                                                                                                           gcgcATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCCGCGCCTACAGGGGGCTATGTGACAGCCCGAGCGGCGACGATCAGTAGGACGCTACCACGATGGACACCCGAc            >  1:1387050/1‑150 (MQ=255)                                                                                                                                           gcgcATTTCCGACCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCCTGGCCCGCGCCTACAGGGGGCTCTGTGACAGCCCGAGCGGCGACGATCAGTAGGACGCTACCACGGTGGACACCCGAc            >  2:1271749/1‑150 (MQ=38)                                                                                                                                               aTTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCCGCGCCTACAGGGGGCTATGTGACAGCCCGAGCGGCGACGATCAGTAGGACGCTACCACGATGGACACCCGACg           <  2:1114417/147‑1 (MQ=255)                                                                                                                                               aTTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCCGCGCCTACAGGGGGCTATGTGACAGCCCGAGCGGCGACGATCAGTAGGACGCTACCACGATGGACACCCGACg           >  1:1114417/1‑147 (MQ=255)                                                                                                                                                  tCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCCGCGCCTACAGGGGGCTATGTGACAGCCCGAGCGGCGACGATCAGTAGGACGCTACCACGATGGACACCCGACGGTtctc     <  1:544500/150‑1 (MQ=255)                                                                                                                                                  cccGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAATCGCGTCCAGACACCGCGTTGCCCGCGCCTACAGGGGGCTATGTGACAGCCCGAGCGGCGACGATCAGTAGGACGCTACCACGATGGACACCCGACGGTtctc     <  1:448289/149‑1 (MQ=255)                                                                                                                                                     gAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGc                                                                                                     >  2:722613/1‑51 (MQ=255)                                                                                                                                                     gAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGc                                                                                                     <  1:722613/51‑1 (MQ=255)                                                                                                                                                     gAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCCGCGCCTACAGGGGGCTATGTGACAGCCCGAGCGGCGACGATCAGTAGGACGCTACCACGATGGACACCCGACGGTTCTCGGt  >  2:926174/1‑150 (MQ=255)                                                                                                                                                      |                                                                                                                                                     TGTATTGCCGGGAGGATTTGCGCAAGTTGAAGCGCATTACCCTGCTGTGGGATTACATCCGCGGGGTGACCGAGGCGAATGCGCCGTTGTTGATGGGGCAAACCCGCGAGATGCGCTTTGCCCAGGACTGATGGGCCTGCGCATTTCCGAGCCCCCCTGTAGAAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCAGACACCGCGTTGCCCGCGCCTACAGGGGGCTATGTGACAGCCCGAGCGGCGACGATCAGTAGGACGCTACCACGATGGACACCCGACGGTTCTCGGT  >  NC_002947/5295387‑5295684

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.