New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5510502 =	49 (0.930)	5 (0.100)	5/234	NT	11.2%	coding (653/1488 nt)	urtB	urea ABC transporter permease
	?	NC_002947	5510551 =	33 (0.660)					coding (702/1488 nt)	urtB	urea ABC transporter permease

CTGCAGCCCGATGCAGAACTAGACCCGGGCGTGCGCACAGCCGCCGAAACGAGCCTGGCCCAGGTCAAGCGCAAACTGCTGCTAGGCGAACTGCTCGGCCAGGCCTTCAGCGGCCTGTCGCTGGGTTCGGTCCTGCTGCTGGCAGCGCTGGGCCTTGCGATCACCTTCGGCCTGCTCGGGGTGATCAACATGGCCCATGGCGAGATGTTGATGCTCGGCGCCTACAGCACCTACATGGTCCAGGTACTGCTGCAGCGCTTCGCCCCAGGCGCCATCGAGTTCTACCCGCTGATTGCC  >  NC_002947/5510354‑5510650                                                                                                                                                     |                                                                                                                                                     ctgcAGCCCGATGCAGAACTAGACCCGGGCGTGCGCACAGCCGCCGAAACGAGCCTGGCCCAGGTCAAGCGCAAACTGCTGCTAGGCGAACTGCTCGGCCAGGCCTTCAGCGGCCTGTCGCTGGGTTCGGTCCTGCTGCTGGCAGCGCTg                                                                                                                                                     <  1:125206/150‑1 (MQ=255) ctgcAGCCCGATGCAGAACTAGACCCGGGCGTGCGCACAGCCGCCGAAACGAGCCTGGCCCAGGTCAAGCGCAAACTGCTGCTAGGCGAACTGCTCGGCCAGGCCTTCAGCGGCCTGTCGCTGGGTTCGGTCCTGCTGCTGGCAGCGCTg                                                                                                                                                     <  1:773803/150‑1 (MQ=255) ctccagcgccatgcctaccccggcactgacggcgaaggccaccggcagggcaatcagcgggtagaactcgatggcgcctggggcgaagcgctgcagcagtacctggaccatgtaggtgctgtaggcgccgagcatcaacatctcgccaTg                                                                                                                                                     >  2:1120229‑M1/149‑150 (MQ=255)  tgcAGCCCGATGCAGAACTAGACCCGGGCGTGCGCACAGCCGCCGAAACGAGCCTGGCCCAGGTCAAGCGCAAACTGCTGCTAGGCGAACTGCTCGGCCAGGCCTTCAGCGGCCTGTCGCTGGGTTCGGTCCTGCTGCTGGCAGCGCTgg                                                                                                                                                    <  2:867519/150‑1 (MQ=255)  tccagcgccatgcctaccccggcactgacggcgaaggccaccggtagggcaatcagcgggtagaactcgatggcgcctggggcgcagcgctgcagcagtacctggaccatgtaggtgctgtaggcgccgagcatcaacatctcgccaTgg                                                                                                                                                    >  2:1025883‑M1/148‑150 (MQ=255)        ccGATGCAGAACTAGACCCGGGCGTGCGCACAGCCGCCGAAACGAGCCTGGCCCAGGTCAAGCGCAAACTGCTGCTAGGCGAACTGCTCGGCCAGGCCTTCAGCGGCCTGTCGCTGGGTTCGGTCCTGCTGCTGGCAGCGCTGGGCCTTg                                                                                                                                              >  1:1420010/1‑150 (MQ=255)         cGATGCAGAACTAGACCCGGGCGTGCGCACAGCCGCCGAAACGAGCCTGGCCCAGGTCAAGCGCAAACTGCTGCTAGGCGAGATGGTCGGCCAGGCCTTCAGCGGCCTGTCGCTGGGTTCGGTCCTGACGTTGGCAGCGCTGGGCCTTGc                                                                                                                                             >  1:668211/1‑150 (MQ=255)         cGATGCAGAACTAGACCCGGGCGTGCGCACAGCCGCCGAAACGAGCCTGGCCCAGGTCAAGCGCAAACTGCTGCTAGGCGAACTGCTCGGCCAGGCCTTCAGCGGCCTGTCGCTGGGTTCGGTCCTGCTGCTGGCAGCGCTGGGCCTTGc                                                                                                                                             <  2:851792/150‑1 (MQ=255)         cGATGCAGAACTAGACCCGGGCGTGCGCACAGCCGCCGAAACGAGCCTGGCCCAGGTCAAGCGCAAACTGCTGCTAGGCGAACTGCTCGGCCAGGCCTTCAGCGGCCTGTCGCTGGGTTCGGTCCTGCTGCTGGCAGCGCTGGGCCTTGc                                                                                                                                             <  1:79471/150‑1 (MQ=255)           aTGCAGAACTAGACCCGGGCGTGCGCACAGCCGCCGAAACGAGCCTGGCCCAGGTCAAGCGCAAACTGCTGCTAGGCGAACTGCTCGGCCAGGCCTTCAGCGGCCTGTCGCTGGGTTCGGTCCTGCTGCTGGCAGCGCTGGGCCTTGCGa                                                                                                                                           <  1:832485/150‑1 (MQ=255)            tGCAGAACTAGACCCGGGCGTGCGCACAGCCGCCGAAACGAGCCTGGCCCAGGTCAAGCGCAAACTGCTGCTAGGCGAACTGCTCGGCCAGGCCTTCAGCGGCCTGTCGCTGGGTTCGGTCCTGCTGCTGGCAGCGCTGGGCCTTGCGAt                                                                                                                                          <  1:201976/150‑1 (MQ=255)               aGAACTAGACCCGGGCGTGCGCACAGCCGCAGAAACGAGCCTGGCCCAGGTCAAGCGCAAACTGCTGCTAGGCGAACTGCTCGGCCAGGCCTTCAGCGGCCTGTCGCTGGGTTCGGTCCTGCTGCTGGCAGCGCTGGGCCTTGCGATCAc                                                                                                                                       >  1:528479/1‑150 (MQ=255)                      gACCCGGGCGTGCGCACAGCCGCCGAAACGAGCCTGGCCCAGGTCAAGCGCAAACTGCTGCTAGGCGAACTGCTCGGCCAGGCCTTCAGCGGCCTGTCGCTGGGTTCGGTCCTGCTGCTGGCAGCGCTGGGCCTTGCGATCACCTTCGGc                                                                                                                                <  2:1420010/150‑1 (MQ=255)                            ggCGTGCGCACAGCCGCCGAAACGAGCCTGGCCCAGGTCAAGCGCAAACTGCTGCTAGGCGAACTGCTCGGCCAGGCCTTCAGCGGCCTGTCGCTGGGTTCGGTCCTGCTGCTGGCAGCGCTGGGCCTTGCGATCACCTTCGGCCTGCTc                                                                                                                          <  1:425819/150‑1 (MQ=255)                            ggCGTGCGCACAGCCGCCGAAACGAGCCTGGCCCAGGTCAAGCGCAAACTGCTGCTAGGCGAACTGCTCGGCCAGGCCTTCAGCGGCCTGTCGCTGGGTTCGGTCCTGCTGCTGGCAGCGCTGGGCCTTGCGATCACCTTCGGCCTGCTc                                                                                                                          <  2:40516/150‑1 (MQ=255)                            ggCGTGCGCACAGCCGCCGAAACGAGCCTGGCCCAGGTCAAGCGCAAACTGCTGCTAGGCGAACTGCTCGGCCAGGCCTTCAGCGGCCTGTCGCTGGGTTCGGTCCTGCTGCTGGCAGCGCTGGGCCTTGCGATCACCTTCGGCCTGCTc                                                                                                                          <  2:39826/150‑1 (MQ=255)                              cGTGCGCACAGCCGCCGAAACGAGCCTGGCCCAGGTCAAGCGCAAACTGCTGCTAGGCGAACTGCTCGGCCAGGCCTTCAGCGGCCTGTCGCTGGGTTCGGTCCTGCTGCTGGCAGCGCTGGGCCTTGCGATCACCTTCGGCCTGCTCgg                                                                                                                        <  1:111370/150‑1 (MQ=255)                                 gcgcACAGCCGCCGAAACGAGCCTGGCCCAGGTCAAGCGCAAACTGCTGCTAGGCGAACTGCTCGGCCAGGCCTTCAGCGGCCTGTCGCTGGGTTCGGTCCTGCTGCTGGCAGCGCTGGGCCTTGCGATCACCTTCGGCCTGCTCGGGGt                                                                                                                     <  2:1017796/150‑1 (MQ=255)                                   gcACAGCCGCCGAAACGAGCCTGGCCCAGGTCAAGCGCAAACTGCTGCTAGGCGAACTGCTCGGCCAGGCCTTCAGCGGCCTGTCGCTGGGTTCGGTCCTGCTGCTGGCAGCGCTGGGCCTTGCGATCACCTTCGGCCTGCTCGGGGTGa                                                                                                                   <  2:1257261/150‑1 (MQ=255)                                     acaGCCGCCGAAACGAGCCTGGCCCAGGTCAAGCGCAAACTGCTGCTAGGCGAACTGCTCGGCCAGGCCTTCAGCGGCCTGTCGCTGGGTTCGGTCCTGCTGCTGGCAGCGCTGGGCCTTGCGATCACCTTCGGCCTGCTCGGGGTGATc                                                                                                                 >  2:951719/1‑150 (MQ=255)                                        caccggcagggcaatcagcgggtagaactcgatggcgcctggggcgaagcgctgcagcagtacctggaccatgtaggtgctgtaggcgccgagcatcaacatctcgccaTgg                                                                                                                                                    >  2:1006064‑M1/110‑112 (MQ=255)                                        caccggcagggcaatcagcgggtagaactcgatggcgcctggggcgaagcgctgcagcagtacctggaccatgtaggtgctgtaggcgccgagcatcaacatctcgccaTgg                                                                                                                                                    <  1:1006064‑M1/3‑1 (MQ=255)                                          cgccgAAACGAGCCTGGCCCAGGTCAAGCGCAAACTGCTGCTAGGCGAACTGCTCGGCCAGGCCTTCAGCGGCCTGTCGCTGGGTTCGGTCCTGCTGCTGGCAGCGCTGGGCCTTGCGATCACCTTCGGCCTGCTCGGGGTGATCAACAt                                                                                                            <  1:155711/150‑1 (MQ=255)                                            ccgAAACGAGCCTGGCCCAGGTCAAGCGCAAACTGCTGCTAGGCGAACTGCTCGGCCAGGCCTTCAGCGGCCTGTCGCTGGGTTCGGTCCTGCTGCTGGCAGCGCTGGGCCTTGCGATCACCTTCGGCCTGCTCGGGGTGATCAACa                                                                                                             >  2:127524/1‑147 (MQ=255)                                            ccgAAACGAGCCTGGCCCAGGTCAAGCGCAAACTGCTGCTAGGCGAACTGCTCGGCCAGGCCTTCAGCGGCCTGTCGCTGGGTTCGGTCCTGCTGCTGGCAGCGCTGGGCCTTGCGATCACCTTCGGCCTGCTCGGGGTGATCAACa                                                                                                             <  1:127524/147‑1 (MQ=255)                                            ccgAAACGAGCCTGGCCCAGGTCAAGCGCAAACTGCTGCTAGGCGAACTGCTCGGCCAGGCCTTCAGCGGCCTGTCGCTGGGTTCGGTCCTGCTGCTGGCAGCGCTGGGCCTTGCGATCACCTTCGGCCTGCTCGGGGTGATCAACATgg                                                                                                          <  1:326503/150‑1 (MQ=255)                                             gcagggcaatcagcgggtagaactcgatggcgcctggggcgaagcgctgcagcagtacctggaccatgtaggtgctgtaggcgccgagcatcaacatctcgccaTGGGCCTTGCGATCACCTTCGGCCTGCTCGGGGTGATCAACATGGc                                                                                                         >  2:524025‑M1/105‑150 (MQ=255)                                                     gCCTGGCCCAGGTCAAGCGCAAACTGCTGCTAGGCGAACTGCTCGGCCAGGCCTTCAGCGGCCTGTCGCTGGGTTCGGTCCTGCTGCTGGCAGCGCTGGGCCTTGCGATCACCTTCGGCCTGCTCGGGGTGATCAACATGGCCCATGGCg                                                                                                 >  1:221494/1‑150 (MQ=255)                                                       cTGGCCCAGGTCAAGCGCAAACTGCTGCTAGGCGAACTGCTCGGCCAGGCCTTCAGCGGCCTGTCGCTGGGTTCGGTCCTGCTGCTGGCAGCGCTGGGCCTTGCGACCACCTTCGGCCTGCTCGGGGTGATCAACATGGCCCATGGCgag                                                                                               <  1:331207/150‑1 (MQ=255)                                                          gCCCAGGTCAAGCGCAAACTGCTGCTAGGCGAACTGCTCGGCCAGGCCTTCAGCGGCCTGTCGCTGGGTTCGGTCCTGCTGCTGGCAGCGCTGGGCCTTGCGATCACCTTCGGCCTGCTCGGGGTGATCAACATGGCCAATGGCGAGATg                                                                                            <  2:1349540/150‑1 (MQ=255)                                                            ccAGGTCAAGCGCAAACTGCTGCTAGGCGAACTGCTCGGCCAGGCCTTCAGCGGCCTGTCGCTGGGTTCGGTCCTGCTGCTGGCAGCGCTGGGCCTTGCGATCACCTTCGGCCTGCTCGGGGTGATCAACATGGCCCATGGCGAGATGtt                                                                                          >  1:1353913/1‑150 (MQ=255)                                                             cAGGTCAAGCGCAAACTGCTGCTAGGCGAACTGCTCGGCCAGGCCTTCAGCGGCCTGTCGCTGGGTTCGGTCCTGCTGCTGGCAGCGCTGGGCCTTGCGATCACCTTCGGCCTGCTCGGGGTGATCAACATGGCCCATGGCGAGATGTTg                                                                                         <  2:1323293/150‑1 (MQ=255)                                                              aGGTCAAGCGCAAACTGGTGCTAGGCGAACTGCTCGGCCAGGCCTTCAGCGGCCTGTCGCTGGGTTCGGTCCTGCTGCTGGCAGCGCTGGGCCTTGCGATCACCTTCGGCCTGCTCGGGGTGATCAACATGGCCCATGGCGAGATGTTGa                                                                                        <  2:424485/150‑1 (MQ=255)                                                              aGGTCAAGCGCAAACTGCTGCTAGGCGAACTGCTCGGCCAGGCCTTCAGCGGCCTGTCGCTGGGTTCGGTCCTGCTGCTGGCAGCGCTGGGCCTTGCGATCACCTTCGGCCTGCTCGGGGTGATCAACATGGCCCATGGCGAGATGTTGa                                                                                        <  1:911240/150‑1 (MQ=255)                                                              aGGTCAAGCGCAAACTGCTGCTAGGCGAACTGCTCGGCCAGGCCTTCAGCGGCCTGTCGCTGGGTTCGGTCCTGCTGCTGGCAGCGCTGGGCCTTGCGATCACCTTCGGCCTGCTCGGGGTGATCAACATGGCCCATGGCGAGATGTTGa                                                                                        <  2:221494/150‑1 (MQ=255)                                                                             tgctgcTAGGCGAACTGCTCGGCCAGGCCTTCAGCGGCCTGTCGCTGGGTTCGGTCCTGCTGCTGGCAGCGCTGGGCCTTGTGATCACCTTCGGCCTGCTCGGGGTGATCAACATGGCCCATGGCGAGATGTTGATGCTCGGCGCCTACa                                                                         >  1:633445/1‑150 (MQ=255)                                                                                 gctAGGCGAACTGCTCGGCCAGGCCTTCAGCGGCCTGTCGCTGGGTTCGGTCCTGCTGCTGGCAGCGCTGGGCCTTGCGATCACCTTCGGCCTGCTCGGGGTGATCAACATGGCCCATGGCGAGATGTTGATGCTCGGCGCCTACAGCAc                                                                     >  2:433800/1‑150 (MQ=255)                                                                                       cGAACTGCTCGGCCAGGCCTTCAGCGGCCTGTCGCTGGGTTCGGTCCTGCTGCTGGCAGCGCTGGGCCTTGCGATCACCTTCGGCCTGCTCGGGGTGATCAACATGGCCCATGGCGAGATGTTGATGCTCGGCGCCTACAGCACCTACAt                                                               >  1:270072/1‑150 (MQ=255)                                                                                        gAACTGCTCGGCCAGGCCTTCAGCGGCCTGTCGCTGGGTTCGGTCCTGCTGCTGGCAGCGCTGGGCCTTGCGATCACCTTCGGCCTGCTCGGGGTGATCAACATgg                                                                                                          >  2:514240/1‑106 (MQ=255)                                                                                        gAACTGCTCGGCCAGGCCTTCAGCGGCCTGTCGCTGGGTTCGGTCCTGCTGCTGGCAGCGCTGGGCCTTGCGATCACCTTCGGCCTGCTCGGGGTGATCAACATgg                                                                                                          <  1:514240/106‑1 (MQ=255)                                                                                            tgcagcagtacctggaccatgtaggtgctgtaggcgccgagcatcaacatctcgccaTGGGCCTTGCGATCACCTTCGGCCTGCTCGGGGTGATCAACATgg                                                                                                          <  2:1372265‑M1/45‑1 (MQ=255)                                                                                            tgcagcagtacctggaccatgtaggtgctgtaggcgccgagcatcaacatctcgccaTGGGCCTTGCGATCACCTTCGGCCTGCTCGGGGTGATCAACATgg                                                                                                          >  1:1372265‑M1/58‑102 (MQ=255)                                                                                              cTCGGCCAGGCCTTCAGCGGCCTGTCGCTGGGTTCGGTCCTGCTGCTGGCAGCGCTGGGCCTTGCGATCACCTTCGGCCTGCTCGGGGTGATCAACATGGCCCATGGCGAGATGTTGATGCTCGGCGCCTACAGCACCTACATGGTCCAg                                                        <  2:1346966/150‑1 (MQ=255)                                                                                                       gCCTTCAGCGGCCTGTCGCTGGGTTCGGTCCTGCTGCTGGCAGCGCTGGGCCTTGCGATCACCTTCGGCCTGCTCGGGGTGATCAACATGGCCCATGGCGAGATGTTGATGCTCGGCGCCTACAGCACCTACATGGTCCAGGTActgctg                                               >  1:192997/1‑150 (MQ=255)                                                                                                        tggaccatgtaggtgctgtaggcgccgagcatcaacatctcgccaTGGGCCTTGCGATCACCTTCGGCCTGCTCGGGGTGATCAACATg                                                                                                           <  1:379342‑M1/44‑1 (MQ=255)                                                                                                        tggaccatgtaggtgctgtaggcgccgagcatcaacatctcgccaTGGGCCTTGCGATCACCTTCGGCCTGCTCGGGGTGATCAACATg                                                                                                           >  2:379342‑M1/46‑89 (MQ=255)                                                                                                         cTTCAGCGGCCTGTCGCTGGGTTCGGTCCTGCTGCTGGCAGCGCTGGGCCTTGCGATCACCTTCGGCCTGCTCGGGGTGATCAACATGGCCCATGGCGAGATGTTGATGCTCGGCGCCTACCGCCCCTACATGGTCCAGTTAcggctgtt                                             <  2:668211/150‑3 (MQ=255)                                                                                                          ttCAGCGGCCTGTCGCTGGGTTCGGTCCTGCTGCTGGCAGCGCTGGGCCTTGCGATCACCTTCGGCCTGCTCGGGGTGATCAACATGGCCCATGGCGAGATGTTGATGCTCGGCGCCTACAGCACCTACATGGTCCAGGTACTGCTGCAg                                            >  1:1209630/1‑150 (MQ=255)                                                                                                                    tGTCGCTGGGTTCGGTCCTGCTGCTGGCAGCGCTGGGCCTTGCGATCACCTTCGGCCTGCTCGGGGTGATCAACATGGCCCATGGCGAGATGTTGATGCTCGGCGCCTACAGCACCTACATg                                                              <  1:1081547/122‑1 (MQ=255)                                                                                                                    tGTCGCTGGGTTCGGTCCTGCTGCTGGCAGCGCTGGGCCTTGCGATCACCTTCGGCCTGCTCGGGGTGATCAACATGGCCCATGGCGAGATGTTGATGCTCGGCGCCTACAGCACCTACATg                                                              >  2:1081547/1‑122 (MQ=255)                                                                                                                    tGTCGCTGGGTTCGGTCCTGCTGCTGGCAGCGCTGGGCCTTGCGATCACCTTCGGACTGCTCGGGGTGATCAACATGGCCCATGGCGAGATGTTGATGATCGGCGCATACAGCACCTACATGGTCAAGGTACTGCTGCAGCGCTTCGccc                                  >  1:1393348/1‑150 (MQ=255)                                                                                                                         cTGGGTTCGGTCCTGCTGCTGGCAGCGCTGGGCCTTGCGATCACCTTCGGCCTGCTCGGGGTGa                                                                                                                   >  2:349270/1‑64 (MQ=255)                                                                                                                         cTGGGTTCGGTCCTGCTGCTGGCAGCGCTGGGCCTTGCGATCACCTTCGGCCTGCTCGGGGTGa                                                                                                                   <  1:349270/64‑1 (MQ=255)                                                                                                                         cTGGGTTCGGTCCTGCTGCTGGCAGCGCTGGGCCTTGCGATCACCTTCGGCCTGCTCGGGGTGATCAACATGGCCCATGGCGAGATGTTGATGCTCGGCGCCTACAGCACCTACATGGTCCAGGTACTGCTGCAGCGCTTCGCCCCAGgc                             <  1:407325/150‑1 (MQ=255)                                                                                                                            ggTTCGGTCCTGCTGCTGGCAGCGCTGGGCCTTGCGATCACCTTCGGCCTGCTCGGGGTGATCAACATGGCCCATGGCGAGATGTTGATGCTCGGCGCCTACAGCACCTACATGGTCCAGGTACTGCTGCAGCGCTTCGCCCCAGGCGcc                          <  2:528479/150‑1 (MQ=255)                                                                                                                                  gTCCTGCTGCTGGCAGCGCTGGGCCTTGCGATCACCTTCGGCCTGCTCGGGGTGATCAACATGGCCCATGGCGAGATGTTGATGCTCGGCGCCTACAGCACCTACATGGTCCAGGTACTGCTGCAGCGCTTCGCCCCAGGAGCCagggag                    >  1:60400/1‑145 (MQ=255)                                                                                                                                   tCCTGCTGCTGGCAGCGCTGGGCCTTGCGATCACCTTCGGCCTGCTCGGGGTGATCAACATGGCCCATGGCGAGATGTTGATGCTCGGCGCCTACAGCACCTACATGGTCCAGGTACTGCTGCAGCGCt                                        >  1:869559/1‑129 (MQ=255)                                                                                                                                   tCCTGCTGCTGGCAGCGCTGGGCCTTGCGATCACCTTCGGCCTGCTCGGGGTGATCAACATGGCCCATGGCGAGATGTTGATGCTCGGCGCCTACAGCACCTACATGGTCCAGGTACTGCTGCAGCGCt                                        <  2:869559/129‑1 (MQ=255)                                                                                                                                   tCCTGCTGCTGGCAGCGCTGGGCCTTGCGATCACCTTCGGCCTGCTCGGGGTGATCAACATGGCCCATGGCGAGATGTTGATGCTCGGCGCCTACAGCACCTACATGGTCCAGGTACTGCTGCAGCGCTTCGCCCCAGGCGCCATCGAGt                   >  2:444874/1‑150 (MQ=255)                                                                                                                                       gctgctgGCAGCGCTGGGCCTTGTGATCACCTTCGGCCTGCTCGGGGTGATCAACATGGCCCATGGCGAGATGTTGATGCTCGGCGCCTACAGCACCTACATGGTCCAGGTACTGCTGCAGCGCTTCGCCCCAGGCGCCATCGAGTTCTa               <  2:633445/150‑1 (MQ=255)                                                                                                                                            tgGCAGCGCTGGGCCTTGCGATCACCTTCGGCCTGCTCGGGGTGATCAACATGGCCCATGGCGAGATGTTGATGCTCGGCGCCTACAGCACCTACATGGTCCAGGTACTGCTGCAGCGCTTCGCCCCAGGCGCCATCGAGTTCTACCCGc          >  1:1082031/1‑150 (MQ=255)                                                                                                                                                   gcTGGGCCTTGCGATCACCTTCGGCCTGCTCGGGGTGATCAACATGGCCCATGGCGAGATGTTGATGCTCGGCGCCTACAGCACCTACATGGTCCAGGTACTGCTGCAGCGCTTCGCCCCAGGCGCCATCGAGt                   >  1:643106/1‑134 (MQ=255)                                                                                                                                                   gcTGGGCCTTGCGATCACCTTCGGCCTGCTCGGGGTGATCAACATGGCCCATGGCGAGATGTTGATGCTCGGCGCCTACAGCACCTACATGGTCCAGGTACTGCTGCAGCGCTTCGCCCCAGGCGCCATCGAGt                   <  2:643106/134‑1 (MQ=255)                                                                                                                                                    cTGGGCCTTGCGATCACCTTCGGCCTGCTCGGGGTGATCAACATGGCCCATGGCGAGATGTTGATGCTCGGCGCCTACAGCACCTACATGGTCCAGGTACTGCTGCAGCGCTTCGCCCCAGGCGCCATCGAGTTCTACCCGCTGATTGcc  >  1:380928/1‑150 (MQ=255)                                                                                                                                                     |                                                                                                                                                     CTGCAGCCCGATGCAGAACTAGACCCGGGCGTGCGCACAGCCGCCGAAACGAGCCTGGCCCAGGTCAAGCGCAAACTGCTGCTAGGCGAACTGCTCGGCCAGGCCTTCAGCGGCCTGTCGCTGGGTTCGGTCCTGCTGCTGGCAGCGCTGGGCCTTGCGATCACCTTCGGCCTGCTCGGGGTGATCAACATGGCCCATGGCGAGATGTTGATGCTCGGCGCCTACAGCACCTACATGGTCCAGGTACTGCTGCAGCGCTTCGCCCCAGGCGCCATCGAGTTCTACCCGCTGATTGCC  >  NC_002947/5510354‑5510650

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.