New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5981456 =	47 (0.890)	13 (0.270)	12/222	NT	22.2%	coding (2045/5049 nt)	PP_5242	GAF domain‑containing sensor histidine kinase
	?	NC_002947	5981491 =	49 (1.030)					coding (2080/5049 nt)	PP_5242	GAF domain‑containing sensor histidine kinase

CAACCGCCAGGCGAACCCTTGAAAGCCTTGATTGGCGCTGGCTTCCTGCAACCGGGCCAGAACGGCTTGGGCTTCACTCATGACCGGGTGATGGAGGCCGCTTATGCACTCACGCCCGTGCACCAGCGCGCCTCGCTGCATGCACGTATCGCCCTGGCCATGCGCCAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATC  >  NC_002947/5981308‑5981600                                                                                                                                                     |                                                                                                                                                 cAAGCGCTAGGCGTACCCTTGAAAGCCTTGATTGGCGCTGGCTTCCTGCAACCGGGCCAGAACGGCTTGGGCTTCACTCATGACCGGGTGATGGAGGCCGCTTATGCACTCACGCCCGTGCACCAGCGCGCCTCGCTGCATGCACGTATc                                                                                                                                                 >  2:132203/1‑150 (MQ=255) cAACCGCCAGGCGAACCCTTGAAAGCCTTGATTGGCGCTGGCTTCCTGCAACCGGGCCAGAACGGCTTGGGCTTCACTCATGACCGGGTGCTTGGTGCCGCTTATGCACTTACGGCCGTGCACCAGCGCGCCTCGCTGCATGCACGTATc                                                                                                                                                 >  1:729055/1‑150 (MQ=255)    ccGCCAGGCGAACCCTTGAAAGCCTTGATTGGCGCTGGCTTCCTGCAACCGGGCCAGAACGGCTTGGGCTTCACTCATGACCGGGTGATGGAGGCCGCTTATGCACTCACGCCCGTGCACCAGCGCGCCTCGCTGCATGCACGTATCGcc                                                                                                                                              <  1:1266070/150‑1 (MQ=255)                 ccTTGAAAGCCTTGATTGGCGCTGGCTTCCTGCAACCGGGCCAGAACGGCTTGGGCTTCACTCATGACCGGGTGATGGAGGCCGCTTATGCACTCACGCCCGTGCACCAGCGCGCCTCGCTGCATGCACGTATCGCCCTGGCCATGCGcc                                                                                                                                 >  1:1175683/1‑150 (MQ=255)                   ttGAAAGCCTTGATTGGCGCTGGCTTCCTGCAACCGGGCCAGAACGGCTTGGGCTTCACTCATGACCGGGTGATGGAGGCCGCTTATGCACTCACGCCCGTGCACCAGCGCGCCTCGCTGCATGCACGTATCGCCCTGGCCATGCGCCAg                                                                                                                               >  2:551230/1‑150 (MQ=255)                   ttGAAAGCCTTGATTGGCGCTGGCTTCCTGCAACCGGGCCAGAACGGCTTGGGCTTCACTCATGACCGGGTGATGGAGGCCGCTTATGCACTCACGCCCGTGCACCAGCGCGCCTCGCTGCATGCACGTATCGCCCTGGCCATGCGCCAg                                                                                                                               >  1:782418/1‑150 (MQ=255)                        aGCCTTGATTGGCGCTGGCTTCCTGCAACCGGGCCAGAACGGCTTGGGCTTCACTCATGACCGGGTGATGGAGGCCGCTTATGCACTCACGCCCGTGCACCAGCGCGCCTCGCTGCATGCACGTATCGCCCTGGCCATGCGCCAGGCTTg                                                                                                                          <  2:1175683/150‑1 (MQ=255)                           cTTGATTGGCGCTGGCTTCCTGCAACAGGGCCAGAACGGCTTGGGCTTCACTCATGACCGGGTGATGGAGGCCGCTTATGCACTCACGCCCGTGCACCAGCGCGCCTCGCTGCATGCACGTATCGCCCTGGCCATGCGCCAGGCTTGGcc                                                                                                                       >  2:1231303/1‑150 (MQ=255)                            cgcgtgcgcatgatgcggcttcgcgtaaaagctgcaggaacgcttcgcagtcatccgctgcaaacccgcaggggctggcgcgttgtagctggctggcgagctcgaacaacacctcgtgcgtTCGCCCTGGCCATGCGCCAGGCTTGGCCa                                                                                                                      >  1:444081‑M1/122‑150 (MQ=255)                             tGATTGGCGCTGGCTTCCTGCAACCGGGCCAGAACGGCTTGGGCTTCACTCATGACCGGGTGATGGAGGCCGCTTATGCACTCACGCCCGTGCACCAGCGCGCCTCGCTGCATGCACGTATCGCCCTGGCCATGCGCCAGGCTTGGCCAg                                                                                                                     <  1:106390/150‑1 (MQ=255)                              gATTGGCGCTGGCTTCCTGCAACCGGGCCAGAACGGCTTCGGCTTCACTCATGACCGGGTGATGGAGGCCGCTTATGCACTCACGCCCGTGCACCAGCGCGCCTCGCTGCATGCACGTATCGCCCTGGCCATGCGCCAGGCTTGGCCAgg                                                                                                                    <  2:497586/150‑1 (MQ=255)                              cgtgcgcatgatgcggcttcgcgtaaaagctgcaggaacgcttcgcagtcatccgctgcaaacccgcaggggctggcgcgttgtagctggctggcgagctcgaacaacacctcgtgcgtTCGCCCTGGCCATGCGCCAGGCTTGGCCAgg                                                                                                                    <  1:344001‑M1/31‑1 (MQ=255)                               gtgcgcatgatgcggcttcgcgtaaaagctgcaggaacgcttcgcagtcatccgctgcaaacccgcaggggctggcgcgttgtagctggctggcgagctcgaacaacacctcgtgcgtTCGCCCTGGCCATGCGCCAGGCTTGGCCAggg                                                                                                                   >  2:344001‑M1/119‑150 (MQ=255)                               gtgcgcatgatgcggcttcgcgtaaaagctgcaggaacccttcgacgtcacccgctgcgaacctgcatgggctcgcgtgttgtagctggctggcgagctccaacaacaccgcgtgcgtTCGCCCTGGCCATGCGCCAGGCTTGGCCAggg                                                                                                                   >  1:1387147‑M1/119‑150 (MQ=255)                                 gcgcatgatgcggcttcgcgtaaaagctgcaggaacgcttcgcagtcatccgctgcaaacccgcaggggctggcgcgttgtagctggctggcgagctcgaacaacacctcgtgcgtTCg                                                                                                                                                <  2:321763‑M1/3‑1 (MQ=255)                                 gcgcatgatgcggcttcgcgtaaaagctgcaggaacgcttcgcagtcatccgctgcaaacccgcaggggctggcgcggtgtagctggctggcgagctcgaacaacacctcgtgcgtTCg                                                                                                                                                >  1:321763‑M1/117‑119 (MQ=255)                                     gcTGGCTTCCTGCAACCGGGCCAGAACGGCTTGGGCTTCACTCATGACCGGGTGATGGAGGCCGCTTATGCACTCACGCCCGTGCACCAGCGCGCCTCGCTGCATCAACGTATCGCACTCGCCATTCTCCTTGCTTGGCCAGGGCGAAcc                                                                                                             >  2:373801/1‑149 (MQ=255)                                         gCTTCCTGCAACCGGGCCAGAACGGCTTGGGCTTCACTCATGACCGGGTGATGGAGGCCGCTTATGCACTCACGCCCGTGCACCAGCGCGCCTCGCTGCATGCACGTATCGCCCTGGCCATGCGCCAGGCTTGGCCAGGGCGAACGCACg                                                                                                         >  1:951447/1‑150 (MQ=255)                                            ggcttcgcgtaaaagctgcaggaacgcttcgcagtcatccgctgcaaacccgcaggggctggcgcgttgtagctggctggcgagctcgaacaacacctcgtgcgtTCGCCCTGGCCATGCGCCAGGCTTGGCCAgg                                                                                                                    <  2:508343‑M1/31‑1 (MQ=255)                                            ggcttcgcgtaaaagctgcaggaacgcttcgcagtcatccgctgcaaacccgcaggggctggcgcgttgtagctggctggcgagctcgaacaacacctcgtgcgtTCGCCCTGGCCATGCGCCAGGCTTGGCCAgg                                                                                                                    >  1:508343‑M1/106‑136 (MQ=255)                                             ccTGCAACCGGGCCAGAACGGCTTGGGCTTCACTCATGACCGGGTGATGGAGGCCGCTTATGCACTCACGCCCGTGCACCAGCGCGCCTCGCTGCATGCACGTATCGCCCTGGCCATGCGCCAGGCTTGGCCAGGGCGAACGCACGAGgt                                                                                                     <  2:782418/150‑1 (MQ=255)                                              cTGCAACCGGGCCAGAACGGCTTGGGCTTCACTCATGACCGGGTGATGGAGGCCGCTTATGCACTCACGCCCGTGCACCAGCGCGCCTCGCTGCATGCACGTATCGCCCTGGCCATGCGCCAGGCTTGGCCAGGGCGAACGCACGAGgtg                                                                                                    >  2:394740/1‑150 (MQ=255)                                              cTGCAACCGGGCCAGAACGGCTTGGGCTTCACTCATGACCGGGTGATGGAGGCCGCTTATGCACTCACGCCCGTGCACCAGCGCGCCTCGCTGCATGCACGTATCGCCCTGGCCATGCGCCAGGCTTGGCCAGGGCGAACGCACGAGgtg                                                                                                    <  1:551230/150‑1 (MQ=255)                                                  aaCCGGGCCAGAACGGCTTGGGCTTCACTCATGACCGGGTGATGGAGGCCGCTTATGCACTCACGCCCGTGCACCAGCGCGCCCCGCTGCAGGCAGGTATCGCCCTGGCCATGCGCCAGGCTTGGCCAGGGCGAACGCACGAGGtgttgt                                                                                                <  2:194958/150‑1 (MQ=255)                                                   aCCGGGCCAGAACGGCTTGGGCTTCACTCATGACCGGGTGATGGAGGCCGCTTATGCACTCACGCCCGTGCACCAGCGCGCCTCGCTGCATGCACGTATCGCCCTGGCCATGCGCCAGGCTTGGCCAGGGCGAACGCACGAGGTgttgtt                                                                                               <  1:394740/150‑1 (MQ=255)                                                     gcaggaacgcttcgcagtcatccgctgcaaacccgcaggggctggcgcgttgtagctggctggcgagctcgaacaacacctcgctgcatgcacgtaTCGCCCTGGCCATGCGCCAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCg                                                                                             >  1:741199‑M1/97‑150 (MQ=255)                                                       ggCCAGAACGGCTTGGGCTTCACTCATGACCGGGTGATGGAGGCCGCTTATGCACTCACGCCCGTGCACCAGCGCGCCTCGCTGCATGCACGTATCGCCCTGGCCATGCGCCAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAg                                                                                           <  1:1231303/150‑1 (MQ=255)                                                          cAGAACGGCTTGGGCTTCACTCATGACCGGGTGATGGAGGCCGCTTATGCACTCACGCCCGTGCACCAGCGCGCCTCGCTGCATGCACGTATCGCCCTGGCCATGCGCCAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTc                                                                                        >  2:218707/1‑150 (MQ=255)                                                              aCGGCTTGGGCTTCACTCATGACCGGGTGATGGAGGCCGCTTATGCACTCACGCCCGTGCACCAGCGCGCCTCGCTGCATGCACGTATCGCCCTGGCCATGCGCCAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCgcca                                                                                    <  2:259601/150‑1 (MQ=255)                                                                   ttGGGCTTCACTCATGACCGGGTGATGGAGGCCGCTTATGCACTGACGCCCGTGCACCAGCGCGCCTCGCTGCATGCACGTATCGCCCTGGCCATGCGCCAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGccagccag                                                                               <  2:1026468/150‑1 (MQ=255)                                                                        cTTCACTCATGACCGGGTGATGGAGGCCGCTTATGCACTCACGCCCGTGCACCAGCGCGCCTCGCTGCATGCACGTATCGCCCTGGCCATGCGCCAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACa                                                                          >  1:697620/1‑150 (MQ=255)                                                                         ttCACTCATGACCGGGTGATGGAGGCCGCTTATGCACTCACGCCCGTGCACCAGCGCGCCTCGCTGCATGCACGTATCGCCCTGGCCATGCGCCAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACaa                                                                         >  1:971452/1‑150 (MQ=255)                                                                         ttCACTCATGACCGGGTGATGGAGGCCGCTTATGCACTCACGCCCGTGCACCAGCGCGCCTCGCTGCATGCACGTATCGCCCTGGCCATGCGCCAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACaa                                                                         >  1:971474/1‑150 (MQ=255)                                                                           cACTCATGACCGGGTGATGGAGGCCGCTTATGCACTCACGCCCGTGCACCAGCGCGCCTCGCTGCATGCACGTATCGCCCTGGCCATGCGCCAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAAcg                                                                       >  1:794052/1‑150 (MQ=255)                                                                                  gACCGGGTGATGGAGGCCGCTTATGCACTCACGCCCGTGCACCAGCGCGCCTCGCTGCATGCACGTATCGCCCTGGCCATGCGCCAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAAcgc                                                                      <  1:308512/144‑1 (MQ=255)                                                                                  gACCGGGTGATGGAGGCCGCTTATGCACTCACGCCCGTGCACCAGCGCGCCTCGCTGCATGCACGTATCGCCCTGGCCATGCGCCAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAAcgc                                                                      >  2:308512/1‑144 (MQ=255)                                                                                    ccGGGTGATGGAGGCCGCTTATGCACTCACGCCCGTGCACCAGCGCGCCTCGCTGCATGCACGTATCGCCCTGGCCATGCGCCAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGccc                                                              >  1:626474/1‑150 (MQ=255)                                                                                     cGGGTGATGGAGGCCGCTTATGCACTCACGCCCGTGCACCAGCGCGCCTCGCTGCATGCACGTATCGCCCTGGCCATGCGCCAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGa                                                                                            >  1:1267109/1‑119 (MQ=255)                                                                                     cGGGTGATGGAGGCCGCTTATGCACTCACGCCCGTGCACCAGCGCGCCTCGCTGCATGCACGTATCGCCCTGGCCATGCGCCAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGa                                                                                            <  2:1267109/119‑1 (MQ=255)                                                                                       ggTGATGGAGGCCGCTTATGCACTCACGCCCGTGCACCAGCGCGCCTCGCTGCATGCACGTATCGCCCTGGCCATGCGCCAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTg                                                           >  2:1099882/1‑150 (MQ=255)                                                                                          gATGGAGGCCGCTTATGCACTCACGCCCGTGCACCAGCGCGCCTCGCTGCATGCACGTATCGCCCTGGCCATGCGCCAGGCTTGGACAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCgg                                                        >  1:380662/1‑150 (MQ=255)                                                                                           aTGGAGGCCGCTTATGCACTCACGCCCGTGCACCAGCGCGCCTCGCTGCATGCACGTATCGCCCTGGCCATGCGCCAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCggg                                                       <  1:1099882/150‑1 (MQ=255)                                                                                              gAGGCCGCTTATGCACTCACGCCCGTGCACCAGCGCGCCTCGCTGCATGCACGTATCGCCCTGGCCATGCGCCAGGCTTGGCCAGGGCGAACGCACGAGGTGGTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGttt                                                    >  1:1335359/1‑150 (MQ=255)                                                                                                  ccGCTTATGCACTCACGCCCGTGCACCAGCGCGCCTCGCTGCATGCACGTATCGCCCTGGCCATGCGCCAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAg                                                >  2:133344/1‑150 (MQ=255)                                                                                                    gCTTATGCACTCACGCCCGTGCACCAGCGCGCCTCGCTGCATGCACGTATCGCCCTGGCCATGCGCCAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCg                                              >  1:248666/1‑150 (MQ=255)                                                                                                     cTTATGCACTCACGCCCGTGCACCAGCGCGCCTCGCTGCATGCACGTATCGCCCTGGCCATGCGCCAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCgg                                             >  2:255543/1‑150 (MQ=255)                                                                                                      ttATGCACTCACGCCCTTGCACCAGCGCGCGTCGCTGGATGCACGTATCGCCCTGGGCATGCGCCAAGTTTGGCCAGGGCGAACGGACGAGGTGTTGTTCGAGCTCGCCAGCCAGTTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGa                                            <  2:17519/150‑1 (MQ=255)                                                                                                         tGCACTCACGCCCGTGCACCAGCGCGCCTCGCTGCATGCACGTATCGCCCTGGCCATGCGCCAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCGGCGGATGa                                         >  1:1192444/1‑150 (MQ=255)                                                                                                             cTCACGCCCGTGCACCAGCGCGCCTCGCTGCATGCACGTATCGCCCTGGCCATGCGCCAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACtac                                     <  2:951447/150‑3 (MQ=255)                                                                                                              tCACGCCCGTGCACCAGCGCGCCTCGCTGCATGCACGTATCGCCCTGGCCATGCGCCAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCg                                    >  2:1233357/1‑150 (MQ=255)                                                                                                                aCGCCCGTGCACCAGCGCGCCTCGCTGCATGCACGTATCGCCCTGGCCATGCGCCAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGaa                                  >  1:1104511/1‑150 (MQ=255)                                                                                                                    ccGTGCACCAGCGCGCCTCGCTGCATGCACGTATCGCCCTGGCCATGCGCCAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGt                              >  1:778338/1‑150 (MQ=255)                                                                                                                      ggctggcgagctcgaacaacacctcgtgcgtTCGCCCTGGCCATGCGCCAGGCTTGGCCAg                                                                                                                     >  2:1277505‑M1/32‑61 (MQ=255)                                                                                                                      ggctggcgagctcgaacaacacctcgtgcgtTCGCCCTGGCCATGCGCCAGGCTTGGCCAg                                                                                                                     <  1:1277505‑M1/30‑1 (MQ=255)                                                                                                                      gTGCACCAGCGCGCCTCGCTGCATGCACGTATCGCCCTGGCCATGCGCCAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTc                            <  1:132203/150‑1 (MQ=255)                                                                                                                        gCACCAGCGCGCCTCGCTGCATGCACGTATCGCCCTGGCCATGCGCCAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCt                          <  2:248666/150‑1 (MQ=255)                                                                                                                              gcgcgcCTCGCTGCATGCACGTATCGCCCTGGCCATGCGCCAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCt                    >  2:664392/1‑150 (MQ=255)                                                                                                                                 tcgaacaacacctcgtgcgaTCGCCCTGGCCATGCGCCAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCgg                                                        <  1:1363868‑M1/91‑1 (MQ=255)                                                                                                                                 tcgaacaacacctcgtgcgaTCGCCCTGGCCATGCGCCAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCgg                                                        >  2:1363868‑M1/21‑111 (MQ=255)                                                                                                                                    aacaacacctcgtgcgtTCGCCCTGGCCATGCGCCAGGCTTGGc                                                                                                                        >  2:744448‑M1/18‑44 (MQ=255)                                                                                                                                    aacaacacctcgtgcgtTCGCCCTGGCCATGCGCCAGGCTTGGc                                                                                                                        <  1:744448‑M1/27‑1 (MQ=255)                                                                                                                                        cTGCATGCACGTATCGCCCTGGCCATGCGCCAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGaa          <  1:1120535/150‑1 (MQ=255)                                                                                                                                        cTGCATGCACGTATCGCCCTGGCCATGCGCCAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGaa          <  2:925709/150‑1 (MQ=255)                                                                                                                                            atgcaCGTATCGCCCTGGCCATGCGCCAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCg      >  2:251820/1‑150 (MQ=255)                                                                                                                                             tgcaCGTATCGCCCTGGCCATGCGCCAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGc     >  2:377633/1‑150 (MQ=255)                                                                                                                                                aCGTATCGCCCTGGCCATGCGCCAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCGCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGACGcatg  >  2:689260/1‑149 (MQ=255)                                                                                                                                                 cGTATCGCCCTGGCCATGCGCCAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGc                                     <  2:193609/114‑1 (MQ=255)                                                                                                                                                 cGTATCGCCCTGGCCATGCGCCAGGCGTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGc                                     >  1:193609/1‑114 (MQ=255)                                                                                                                                                     TCGCCCTGGCCATGCGCCAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCgg                                                        <  2:269924‑M1/91‑1 (MQ=255)                                                                                                                                                     TCGCCCTGGCCATGCGCCAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCgg                                                        >  1:269924‑M1/1‑91 (MQ=255)                                                                                                                                                     |                                                                                                                                                 CAACCGCCAGGCGAACCCTTGAAAGCCTTGATTGGCGCTGGCTTCCTGCAACCGGGCCAGAACGGCTTGGGCTTCACTCATGACCGGGTGATGGAGGCCGCTTATGCACTCACGCCCGTGCACCAGCGCGCCTCGCTGCATGCACGTATCGCCCTGGCCATGCGCCAGGCTTGGCCAGGGCGAACGCACGAGGTGTTGTTCGAGCTCGCCAGCCAGCTACAACGCGCCAGCCCCTGCGGGTTTGCAGCGGATGACTGCGAAGCGTTCCTGCAGCTTTTACGCGAAGCCGCATC  >  NC_002947/5981308‑5981600

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.