New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 110027	63 (1.200)	7 (0.140)	5/236	NT	10.0%	coding (47/1590 nt)	ctaD	cytochrome c oxidase subunit 1
	?	NC_002947	= 110047	65 (1.290)					coding (67/1590 nt)	ctaD	cytochrome c oxidase subunit 1

GTGCTGGCGCTGAAGCAGGCAGAAGCCAAGTGAACCGGGTTACTCGCGGCAATCAATGGATTGCAGGAGACAGGACATGAGTGCAGTGATCGACGACCACGCCCACGGCCACGACCATGCGCACGGCCCGGCCAAGGGCCTGATGCGCTGGGTGCTGACCACCAACCATAAAGACATCGGCACGATGTACCTGTGGTTCAGTTTCATCATGTTCCTGCTCGGTGGCTCGTTTGCCATGGTGATCCGCGCTGAGCTGTTCCAGCCGGGTTTGCAGATCGTGGAGCCGGCGTTC  >  NC_002947/109905‑110196                                                                                                                                               |                                                                                                                                                      gTGCTGGCGCTGAAGCAGGCAGAAGCCAAGTGAACCGGGTTACTCGCGGCAATCAATGGATTGCAGGAGACAGGACATGAGTGCAGTGATCGACGACCACGCCCACGGCCACGACCATGCGCACGGCCCGGCCAAGGGCCTGATGCGCTg                                                                                                                                                >  2:1356415/1‑150 (MQ=255)  tGCTGGCGCTGAAGCAGGCAGAAGCCAAGTGAACCGGGTTACTCGCGGCAATCAATGGATTGCAGGAGACAGGACATGAGTGCAGTGATCGACGACCACGCCCACGGCCACGACCATGCGCACGGCCCGGCCAAGGGCCTGATGCGCTgg                                                                                                                                               <  2:1414503/150‑1 (MQ=255)     tGGCGCTGAAGCAGGCAGAAGCCAAGTGAACCGGGTTACTCGCGGCAATCAATGGATTGCAGGAGACAGGACATGAGTGCAGTGATCGACGACCACGCCCACGGCCACGACCATGCGCACGGCCCGGCCAAGGGCCTGATGCGCTGGGTg                                                                                                                                            >  1:762828/1‑150 (MQ=255)     tGGCGCTGAAGCAGGCAGAAGCCAAGTGAACCGGGTTACTCGCGGCAATCAATGGATTGCAGGAGACAGGACATGAGTGCAGTGATCGACGACCACGCCCACGGCCACGACCATGCGCACGGCCCGGCCAAGGGCCTGATGCGCTGGGTg                                                                                                                                            >  2:1343002/1‑150 (MQ=255)       gcgcGGAAGCAGGCAGAAGCCAAGTGAACCGGGTTACTCGCGGCAATCAATGGATTGCAGGAGACAGGACATGAGTGCAGTGATCGACGACCACGCCCACGGCCACGACCATGCGCACGGCCCGGCCAAGGGCCTGATGCGCTGGGTGCt                                                                                                                                          <  2:640649/150‑1 (MQ=255)          cTGAAGCAGGCAGAAGCCAAGTGAACCGGGTTACTCGCGGCAATCAATGGATTGCAGGAGACAGGACATGAGTGCAGTGATCGACGACCACGCCCACGGCCACGATCATGCGCACGGCCCGGCCAAGGGCCTGATGCGCTGGGTGCTGac                                                                                                                                       <  1:685368/150‑1 (MQ=255)                caggcagAAGCCAAGTGAACCGGGTTACTCGCGGCAATCAATGGATTGCAGGAGACAGGACATGAGTGCAGTGATCGACGACCACGCCCACGGCCACGACCATGCGCACGGCCCGGCCAAGGGCCTGATGCGCTGGGTGCTGACCaccaa                                                                                                                                 <  1:151368/150‑1 (MQ=255)                  ggcagAAGACAAGTGAACCGGGTTACTCGCGGCAATCAATGGATTGCAGGAGACAGGACATGAGTGCAGTGATCGACGACCACGCCCACGGCCACGACCATGCGCACGGCCCGGCCAAGGGCCTGATGCGCTGGGTGCTGACCaccaacc                                                                                                                               <  1:360534/150‑1 (MQ=255)                    cagAAGCCAAGTGAACCGGGTTACTCGCGGCAATCAATGGATTGCAGGAGACAGGACATGAGTGCAGTGCTCGACGACCACGCCCACGGCCACGACCATGCGCACGGCCCGGCCAAGGGCCTGATGCGCTGGGTGCTGACCACCAACCAt                                                                                                                             >  2:98499/1‑150 (MQ=255)                      gAAGCCAAGTGAACCGGGTTACTCGCGGCAATCAATGGATTGCAGGAGACAGGACATGAGTGCAGTGATCGACGACCACGCCCACGGCCACGACCATGCGCACGGCCCGGCCAAGGGCCTGATGCGCTGGGTGCTGACCACCAACCATaa                                                                                                                           >  1:520621/1‑150 (MQ=255)                       aaGCCAAGTGAACCGGGTTCCTCGCGGCAATCAATGGATTGCAGGAGACAGGACATGAGTGCAGTGATCGACGACCACGCCCACGGCCACGACCATGCGCACGGCCCGGCCAAGGGCCTGATGCGCTGGGTGCTGACCACCAACCATaaa                                                                                                                          <  2:937716/150‑1 (MQ=255)                       aaGCCAAGTGAACCGGGTTACTCGCGGCAATCAATGGATTGCAGGAGACAGGACATGAGTGCAGTGATCGACGACCACGCCCACGGCCACGACCATGCGCACGGCCCGGCCAAGTGCCTGATGCGCTGGGTGCTGACCACCAACCATaaa                                                                                                                          <  1:287034/150‑1 (MQ=255)                       aaGCCAAGTGAACCGGGTTACTCGCGGCAATCAATGGATTGCAGGAGACAGGACATGAGTGCAGTGATCGACGACCACGCCCACGGCCACGACCATGCGCACGGCCCGGCCAAGGGCCTGATGCGCTGGGTGCTGACCACCAACCATaaa                                                                                                                          <  1:972229/150‑1 (MQ=255)                              gTGAACCGGGTTACTCGCGGCAATCAATGGATTGCAGGAGACAGGACATGAGTGCAGTGATCGACGACCACGCCCACGGCCACGACCATGCGCACGGCCCGGCCAAGGGCCTGATGCGCTGGGTGCTGACCACCAACCATAAAGACATCg                                                                                                                   <  2:1386729/150‑1 (MQ=255)                                 aaCCGGGTTACTCGCGGCAATCAATGGATTGCAGGAGACAGGACATGAGTGCAGTGATCGACGACCACGCCCACGGCCACGACCATGCGCACGGCCCGGCCAAGGGCCTGATGCGCTGGGTGCTGACCACCAACCATAAAGACATCGGCa                                                                                                                <  1:1343002/150‑1 (MQ=255)                                 aaCCGGGTTACTCGCGGCAATCAATGGATTGCAGGAGACAGGACATGAGTGCAGTGATCGACGACCACGCCCACGGCCACGACCATGCGCAAGGCCCGTGTAAGGACCTAGTGTGTTTTTTGGTGACCACCAAGCATAAAGACCTCggaa                                                                                                                >  2:589970/1‑148 (MQ=255)                                    cGGGTTACTCGCGGCAATCAATGGATTGCAGGAGACAGGACATGAGTGCAGTGATCGACGACCACGCCCACGGCCACGACCATGCGCACGGCCCGGCCAAGGGCCTGATGCGCTGGGTGCTGACCACCAACCATAAAGACATCgtgccga                                                                                                             <  1:721284/150‑7 (MQ=255)                                    cGGGTTACTCGCGGCAATCAATGGATTGCAGGAGACAGGACATGAGTGCAGTGATCGACGACCACGCCCACGGCCACGACCATGCGCACGGCCCGGCCAAGGGCCTGATGCGCTGGGTGCTGACCACCAACCATAAAGACATCGGCACGa                                                                                                             >  1:1376652/1‑150 (MQ=255)                                         tACTCGCGGCAATCAATGGATTGCAGGAGACAGGACATGAGTGCAGTGATCGACGACCACGCCCACGGCCACGACCATGCGCACGGCCCGGCCAAGGGCCTGATGCGCTGGGTGCTGACCACCAACCATAAAGACATCGGCACGATGTAc                                                                                                        <  2:762828/150‑1 (MQ=255)                                            tCGCGGCAATCAATGGATTGCAGGAGACAGGACATGAGTGCAGTGATCGACGACCACGCCCACGGCCACGACCATGCGCACGGCCCGGCCAAGGGCCTGATGCGCTGGGTGCTGACCACCAACCATAAAGACATCGGCACGa                                                                                                             <  1:536389/142‑1 (MQ=255)                                            tCGCGGCAATCAATGGATTGCAGGAGACAGGACATGAGTGCAGTGATCGACGACCACGCCCACGGCCACGACCATGCGCACGGCCCGGCCAAGGGCCTGATGCGCTGGGTGCTGACCACCAACCATAAAGACATCGGCACGa                                                                                                             >  2:536389/1‑142 (MQ=255)                                             cgcgGCAATCAATGGATTGCAGGAGACAGGACATGAGTGCAGTGATCGACGACCACGCCCACGGCCACGACCATGCGCACGGCCCGGCCAAGGGCCTGATGCGCTGGGTGCTGACCACCAACCATAAAGACATCGGCACGATGTACCtgt                                                                                                    <  2:1376652/150‑1 (MQ=255)                                              gcgGCAATCAATGGATTGCAGGAGACAGGACATGAGTGCAGTGATCGACGACCACGCCCACGGCCACGACCATGCGCACGGCCCGGCCAAGGGCCTGATGCGCTGGGTGCTGACCACCAACCATAAAGACATCGGCAc                                                                                                               >  1:973521/1‑138 (MQ=255)                                              gcgGCAATCAATGGATTGCAGGAGACAGGACATGAGTGCAGTGATCGACGACCACGCCCACGGCCACGACCATGCGCACGGCCCGGCCAAGGGCCTGATGCGCTGGGTGCTGACCACCAACCATAAAGACATCGGCAc                                                                                                               <  2:973521/138‑1 (MQ=255)                                              cctgCAATCCATTGATTGCAGGAGACAGGACATGAGTGCAGTGATCGACGACCACGCCCACGGCCACGACCATGCGCACGGCCCGGCCAAGGGCCTGATGCGCTGGGTGCTGac                                                                                                                                       <  1:992071/111‑1 (MQ=255)                                              cctgCAATCCATTGATTGCAGGAGACAGGACATGAGTGCAGTGATCGACGACCACGCCCACGGCCACGACCATGCGCACGGCCCGGCCAAGGGCCTGATGCGCTGGGTGCTGac                                                                                                                                       >  2:992071/4‑114 (MQ=255)                                                 gCAATCAATGGATTGCAGGAGACAGGACATGAGTGCAGTGATCGACGACCACGCCCACGGCCACGACCATGCGCACGGCCCGGCCAAGGGCCTGATGCGCTGGGTGCTGACCACCAACCATAAAGACATCGGCACGATGTACCTGTGGtt                                                                                                <  2:110129/150‑1 (MQ=255)                                                   aatcaatGGATTGCAGGAGACAGGACATGAGTGCAGTGATCGACGACCACGCCCACGGCCACGACCATGCGCACGGCCCGGCCAAGGGCCTGATGCGCTGGGTGCTGACCACCAACCATAAAGACATCGGCACGATGTACCTGTGGTTCa                                                                                              <  1:589970/150‑1 (MQ=255)                                                       aatGGATTGCAGGAGACAGGACATGAGTGCAGTGATCGACGACCACGCCCACGGCCACGACCATGCGCACGGCCCGGCCAAGGGCCTGATGCGCTGGGTGCTGACCACCAACCATAAAGACATCGGCACGATGTAc                                                                                                        <  1:631159/136‑1 (MQ=255)                                                       aatGGATTGCAGGAGACAGGACATGAGTGCAGTGATCGACGACCACGCCCACGGCCACGACCATGCGCACGGCCCGGCCAAGGGCCTGATGCGCTGGGTGCTGACCACCAACCATAAAGACATCGGCACGATGTAc                                                                                                        >  2:631159/1‑136 (MQ=255)                                                        atGGATTGCAGGAGACAGGACATGAGTGCAGTGATCGACGACCACGCCCACGGCCACGACCATGCGCACGGCCCGGCCAAGGGCCTGATGCGCTGGGTGCTGACCACCAACCATAAAGACATCGGCACGATGTACCTGTGGTTCAGTTtc                                                                                         >  2:1282542/1‑150 (MQ=255)                                                        aggtatggCAGGAGCCTGGTCCTGAGTGCAGCGATTGACGGCCTCACCGATGGCGATGACCATGCGCAAGGCCCTGCCAAGGGCCTGGTGCGCTGGGTGCTGACCGCTGACCATAAAGACATCGGCACGATGTACCTGTGGTTCAGTTtc                                                                                         <  2:248173/143‑1 (MQ=255)                                                             ttGCAGGAGACAGGACATGAGTGCAGTGATCGACGACCACGCCCATGGCCACGACCATGCGCACGGCCCGGCCAAGGGCCTGATGCGCTGGGTGCTGACCACCAACCATAAAGACATCGGCACGATGTACCTGTGGTTCAGTTTcatcat                                                                                    >  2:92267/1‑150 (MQ=255)                                                               gCAGGAGACAGGACATGAGTGCAGTGATCGACGACCACGCCCACGGCCACGACCATGCGCACGGCCCGGCCAAGGGCCTGATGCGCTGGGTGCTGACCACCAACCATAAAGACATCGGCACGATGTACCTGTGGTTCAGTTTCATCATGt                                                                                  <  2:1136504/150‑1 (MQ=255)                                                                 aGGAGACAGGACATGAGTGCAGTGATCGACGACCACGCCCACGGCCACGACCATGCGCACGGCCCGGCCAAGGGCCTGATGCGCTGGGTGCTGACCACCAACCATAAAGACATCGGCACGATGTACCTGTGGTTCAGTTTCATCATGTTc                                                                                >  2:410854/1‑150 (MQ=255)                                                                          gACATGAGTGCAGTGATCGACGACCACGCCCACGGCCACGACCATGCGCACGGCCCGGCCAAGGGCCTGATGCGCTGGGTGCTGACCACCAACCATAAAGACATCGGCACGATGTACCTGTGGTTCAGTTTCATCATGTTCCTGCTCGGt                                                                       <  2:1318817/150‑1 (MQ=255)                                                                            cATGAGTGCAGTGATCGACGACCACGCCCACGGCCACGACCATGCGCACGGCCCGGCCAAGGGCCTGATGCGCTGGGTGCTGACCACCAACCATAAAGACATCGGCAc                                                                                                               >  2:1418776/1‑108 (MQ=255)                                                                            cATGAGTGCAGTGATCGACGACCACGCCCACGGCCACGACCATGCGCACGGCCCGGCCAAGGGCCTGATGCGCTGGGTGCTGACCACCAACCATAAAGACATCGGCAc                                                                                                               <  1:1418776/108‑1 (MQ=255)                                                                             aTGAGTGCAGTGATCGACGACCACGCCCACGGCCACGACCATGCGCACGGCCCGGCCAAGGGCCTGATGCGCTGGGTGCTGACCACCAACCATAAAGACATCGGCACGa                                                                                                             <  2:976611/109‑1 (MQ=255)                                                                             aTGAGTGCAGTGATCGACGACCACGCCCACGGCCACGACCATGCGCACGGCCCGGCCAAGGGCCTGATGCGCTGGGTGCTGACCACCAACCATAAAGACATCGGCACGa                                                                                                             >  1:976611/1‑109 (MQ=255)                                                                             aTGAGTGCAGTGATCGACGACCACGCCCACGGCCACGACCATGCGCACGGCCCGGCCAAGGGCCTGATGCGCTGGGTGCTGACCACCAACCATAAAGACATCGGCACGATGTACCTGTGGTTCAGTTTCATCATGTTCCTGCTCGGTGGc                                                                    >  2:33274/1‑150 (MQ=255)                                                                                     aGTGATCGACGACCACGCCCACGGCCACGACCATGCGCACGGCCCGGCCAAGGGCCTGATGCGCTGGGTGCTGACCACCAACCATAAAGACATCGGCACGATGTACCTGTGGTTCAGTTTCATCATGTTCCTGCTCGGTGGCTCGTTTGc                                                            <  1:1345812/150‑1 (MQ=255)                                                                                         aTCGACGACCACGCCCACGGCCACGACCATGCGCACGGCCCGGCCAAGGGCCTGATGCGCTGGGTGCTGACCACCAACCATAAAGACATCGGCACGATGTACCTGTGGTTCAGTTTCATCATGTTCCTGCTCGGTGGCTCGTTTGCCATg                                                        <  1:410854/150‑1 (MQ=255)                                                                                         aTCGACGACCACGCCCACGGCCACGACCATGCGAACGGCCCGGCCAAGGGCCAGAACCCCGGGGTGCTGACCACCAACCATAAAGACATCGGCACGATGTACCTGTGGTTCAGTTTCATCATGTTCCTGCTCGGTGGCTCGTTTGCCATg                                                        <  1:728238/150‑1 (MQ=255)                                                                                          tCGACGACCACGCCCACGGCCACGACCATGCGCACGGCCCGGCCAAGGGCCTGATGCGCTGGGTGCTGACCACCAACCATAAAGACATCGGCACGATGTACCTGTGGTTCAGTTTCATCATGTTCCTGCTCGGTGGCTCGTTTGCCATgg                                                       <  2:816092/150‑1 (MQ=255)                                                                                          tCGACGACCACGCCCACGGCCACGACCATGCGCACGGCCCGGCCAAGGGCCTGATGCGCTGGGTGCTGACCACCAACCATAAAGACATCGGCACGATGTACCTGTGGTTCAGTTTCATCATGTTCCTGCTCGGTGGCTCGTTTGCCATgg                                                       <  2:1245685/150‑1 (MQ=255)                                                                                            gacgacCACGCCCACGGCCACGACCATGCGCACGGCCCGGCCAAGGGCCTGATGCGCTGGGTGCTGACCACCAACCATAAAGACATCGGCACGATGTACCTGTGGTTCAGTTTCATCATGTTCCTGCTCGGTGGCTCGTTTGCCATGGTg                                                     >  1:314883/1‑150 (MQ=255)                                                                                             acgacCACGCCCACGGCCACGACCATGCGCACGGCCCGGCCAAGGGCCTGATGCGCTGGGTGCTGACCACCAACCATAAAGACATCGGCACGATg                                                                                                           <  2:684464/95‑1 (MQ=255)                                                                                             acgacCACGCCCACGGCCACGACCATGCGCACGGCCCGGCCAAGGGCCTGATGCGCTGGGTGCTGACCACCAACCATAAAGACATCGGCACGATg                                                                                                           >  1:684464/1‑95 (MQ=255)                                                                                             acgacCACGCCCACGGCCACGACCATGCGCACGGCCCGGCCAAGGGCCTGATGCGCTGGGTGCTGACCACCAACCATAAAGACATCGGCACGATGTACCTGTGGTTCAGTTTCATCATGTTc                                                                                >  1:1067226/1‑122 (MQ=255)                                                                                             acgacCACGCCCACGGCCACGACCATGCGCACGGCCCGGCCAAGGGCCTGATGCGCTGGGTGCTGACCACCAACCATAAAGACATCGGCACGATGTACCTGTGGTTCAGTTTCATCATGTTc                                                                                <  2:1067226/122‑1 (MQ=255)                                                                                             acgacCACGCCCACGGCCACGACCATGCGCACGGCCCGGCCAAGGGCCTGATGCGCTGGGTGCTGACCACCAACCATAAAGACATCGGCACGATGTACCTGTGGTTCAGTTTCATCATGTTCCTGCTCGGTGGCTCGTTTGCCATGGTGa                                                    <  2:1304442/150‑1 (MQ=255)                                                                                                   aCGCCCACGGCCACGACCATGCGCACGGCCCGGCCAAGGGCCTGATGCGCTGGGTGCTGACCACCAACCATAAAGACATCGGCACGATGTACCTGTGGTTCAGTTTCATCATGTTCCTGCTCGGTGGCTCGTTTGCCATGGTGATCcgcg                                              >  2:435179/1‑150 (MQ=255)                                                                                                     gCCCACGGCCACGACCATGCGCACGGCCCGGCCAAGGGCCTGATGCGCTGGGTGCTGACCACCAACCATAAAGACATCGGCACGATGTACCTGTGGTTCAGTTTCATCATGTTCCTGCTCGGTGGCTCGTTTGCCATGGTGATCCGCGCt                                            >  2:989397/1‑150 (MQ=255)                                                                                                       ccACGGCCACGACCATGCGCACGGCCCGGCCAAGGGCGTGATGCGCTGGGTGCGGACCACCAACCATAAAGACATCGGCACGATGTACCTGTGGTTCAGTTTCATCATGTTCCTGCTCGGTGGCTCGTTTGCCATGGTGATCCACCCTgg                                          >  2:458564/1‑149 (MQ=255)                                                                                                              cACGACCATGCGCACGGCCCGGCCAAGGGCCTGATGCGCTGGGTGCTGACCACCAACCATAAAGACATCGGCACGATGTACCTGTGGTTCAGTTTCATCATGTTCCTGCTCGGTGGCTCGTTTGCCATGGTGATCCGCGCTGAGCTGTTc                                   >  2:353432/1‑150 (MQ=255)                                                                                                                 gACCATGCGCACGGCCCGGCCAAGGGCCTGAtgcgcatggtcgtggccgtgggcgtggtcgtcgatcactgcactcatgtcctgtctcctgcaatccattgattgccgcgagtaacccggttcacttggcttctgc                                              <  2:32064‑M2/136‑106 (MQ=255)                                                                                                                 gACCATGCGCACGGCCCGGCCAAGGGCCTGAtgcgcatggtcgtggccgtgggcgtggtcgtcgatcactgcactcatgtcctgtctcctgcaatccattgattgccgcgagtaacccggttcacttggcttctgc                                              >  1:32064‑M2/1‑31 (MQ=255)                                                                                                                 gACCATGCGCACGGCCCGGCCAAGGGCCTGATGCGCTGGGTGCTGACCACCAACCATAAAGACATCGGCACGATGTACCTGTGGTTCAGTTTCATCATGt                                                                                  <  2:1073655/100‑1 (MQ=255)                                                                                                                 gACCATGCGCACGGCCCGGCCAAGGGCCTGATGCGCTGGGTGCTGACCACCAACCATAAAGACATCGGCACGATGTACCTGTGGTTCAGTTTCATCATGt                                                                                  >  1:1073655/1‑100 (MQ=255)                                                                                                                 gACCATGCGCACGGCCAGGCCAAGGGCCTGATGCGCTGGGTGc                                                                                                                                           >  1:1348847/1‑43 (MQ=255)                                                                                                                 gACCATGCGCACGGCCAGGCCAAGGGCCTGATGCGCTGGGTGc                                                                                                                                           <  2:1348847/43‑1 (MQ=255)                                                                                                                    cATGCGCACGGCCCGGCCAAGGGCCTGAtgcgcatggtcgtggccgtgggcgtggtcgtcgatcactgcactcatgtcctgtctcctgcaatccatt                                                                                  >  2:1023026‑M2/1‑28 (MQ=255)                                                                                                                    cATGCGCACGGCCCGGCCAAGGGCCTGAtgcgcatggtcgtggccgtgggcgtggtcgtcgatcactgcactcatgtcctgtctcctgcaatccatt                                                                                  <  1:1023026‑M2/97‑70 (MQ=255)                                                                                                                     aTGCGCACGGCCCGGCCAAGGGCCTGATGCGCTGGGTGCTGACCACCAACCATAAAGACATCGGCACGATGTACCTGTGGTTCAGTTTCATCATGTTCCTGCTCGGTGGCTCGTTTGCCATGGTGATCCGCGCTGAGCTGTTCCAGCCgg                            >  1:639014/1‑150 (MQ=255)                                                                                                                         gcACGGCCCGGCCAAGGGCCTGATGCGCTGGGTGCTGACCACCAACCATAAAGACATCGGCACGATGTACCTGTGGTTCAGTTTCATCATGTTCCTGCTCGGTGGCTCGTTTGCCATGGTGATCCGCGCTGAGCTGTTCCAGCCGGGttt                        >  1:542052/1‑150 (MQ=255)                                                                                                                         gcACGGCCCGGCCAAGGGCC‑Ggcgcatggtcgtggccgtgggcgtggtcgtcgatcactgcactcatgtcctgtctcctgcaatccattgattgccgcgagtaacccggttcacttggcttctgcctgcttcagcgccagcacgtcctt                        <  2:326112‑M2/150‑129 (MQ=255)                                                                                                                         gcACGGCCCGGCCAAGGGCC‑Ggcgcatggtcgtggccgtgggcgtggtcgtcgatcactgcactcatgtcctgtctcctgcaatccatt                                                                                    <  1:443507‑M2/90‑69 (MQ=255)                                                                                                                         gcACGGCCCGGCCAAGGGCC‑Ggcgcatggtcgtggccgtgggcgtggtcgtcgatcactgcactcatgtcctgtctcctgcaatccatt                                                                                    >  2:443507‑M2/1‑22 (MQ=255)                                                                                                                            cggcccggccAAGGGCCTGATGCGCTGGGTGCTGACCACCAACAATAATGACATCGTCACGATGTACCTGTGGTTCAGTTTCATCATGTTCCTGCTCGTTGCCGCGTTTGCCATGGTGATCCGCGCTGAGCTGTTCCAGCCGGGTTTGCa                     <  1:748348/150‑1 (MQ=255)                                                                                                                              gcccggccAAGGGCCTGATGCGCTGGGTGCTGACCACCAACCATAAAGACATCGGCACGATGTACCTGTGGTTCAGTTTCATCATGTTCCTGCTCGGTGGCTCGTTTGCCATGGTGATCCGCGCTGAGCTGTTCCAGCCGGGTTTGCAGa                   >  1:847283/1‑150 (MQ=255)                                                                                                                              gcccggccAAGGGCCTGATGCCCTGGGTGCTGACCACCAACCATAAAGACATCGGCACGATGTACCTGTGGTTCAGTTTCATCATGTTCCTGCTCGGTGGCTCGTTTGCCATGGTGATCCGCGCTGAGCTGTTCCAGCCGGGTTTGCAGa                   >  2:358640/1‑150 (MQ=255)                                                                                                                                 cggccAAGGGCCTGATGCGCTGGGTGCTGACCACCAACCATAAAGACATCGGCACGATGTACCTGTGGTTCAGTTTCATCATGTTCCTGCTCGGTGGCTCGTTTGCCATGGTGATCCGCGCTGAGCTGTTCCAGCCGGGTTTGCAGATCg                <  2:639014/150‑1 (MQ=255)                                                                                                                                   gccAAGGGCCTGATGCGCTGGGTGCTGACCACCAACCATAAAGACATCGGCACGATGTACCTGTGGTTCAGTTTCATCATGTTCCTGCTCGGTGGCTCGTTTGCCATGGTGATCCGCGCTGAGCTGTTCCAGCCGGGTTTGCAGATCGTg              <  1:92267/150‑1 (MQ=255)                                                                                                                                              gATGCGCTGGGTGCTGACCACCAACCATAAAGACATCGGCACGATGTACCTGTGGTTCAGTTTCATCATGTTCCTGCTCGGTGGCTCGTTTGCCATGGTGATCCGCGCTGAGCTGTTCCAGCCGGGTTTGCAGATCGTGGAGCCGGCGtt   >  2:359194/1‑150 (MQ=255)                                                                                                                                              gATGCGCTGGGTGCTGACCACCAACCATAAAGACATCGGCACGATGTACCTGTGGTTCAGTTTCATCATGTTCCTGCTCGGTGGCTCGTTTGCCATGGTGATCCGCGCTGAGCTGTTCCAGCCGGGTTTGCAGATCGTGGAGCCGGCGtt   >  2:1030489/1‑150 (MQ=255)                                                                                                                                               aTGCTCTGTGTGCTGACCACCAACCATAAAGACATCGGCACGATGTACCTGTGGTTCAGTTTCATCATGTTCCTGCTCGGTGGCTCGTTTGCCATGGTGATCCGCGCTGAGCTGTTCCAGCCGGGTTTGCAGATCGTGGAGCCGGCGttc  <  2:672688/150‑1 (MQ=255)                                                                                                                                               |                                                                                                                                                      GTGCTGGCGCTGAAGCAGGCAGAAGCCAAGTGAACCGGGTTACTCGCGGCAATCAATGGATTGCAGGAGACAGGACATGAGTGCAGTGATCGACGACCACGCCCACGGCCACGACCATGCGCACGGCCCGGCCAAGGGCCTGATGCGCTGGGTGCTGACCACCAACCATAAAGACATCGGCACGATGTACCTGTGGTTCAGTTTCATCATGTTCCTGCTCGGTGGCTCGTTTGCCATGGTGATCCGCGCTGAGCTGTTCCAGCCGGGTTTGCAGATCGTGGAGCCGGCGTTC  >  NC_002947/109905‑110196

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.