New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 171740651 (0.970)7 (0.140) 7/234 NT 11.2% coding (63/777 nt) rsmJ ribosomal RNA small subunit methyltransferase J
?NC_002947 = 1717427 63 (1.260)coding (84/777 nt) rsmJ ribosomal RNA small subunit methyltransferase J

ATTGCCTGTATCGGCCGTGGCTGCCGATTCATTAAGGGCTTGGTTTGATTTTTCGGGTGTGAACGATGGAAGAGCAAGGCACGGGTATCAGGGTCGAGGCGATGACAGCTGAGTATGCGCAACAGGCCAGGGCGTGGGCTGAACGCCTGGGCCTGCCGCTGCAGGACGATACCGCCGCCTTCGCGGTGCAGGTGGGCGTCGACGGCTTGCAGATTCAGCAACTGGGCCCGCAGGCGCCTGGGCCGGTGCGTGTGGACTTCGTCGAAGGTCAGGCTGCGCATCGCCGCCAGTTTGGC  >  NC_002947/1717279‑1717574
                                                                                                                                                     |                                                                                                                                                   
aTTGCCTGTATCGGCCGTGGCTGCCGATTCATTAAGGGCTTGGTTTGATTTTTCGGGTGTGAACGATGGAAGAGCAAGGCACGGGTATCAGGGTCGAGGCGATGACAGCTGAGTATGCGCAACAGGCCAGGGCGTGGGCTGAACGCCTGg                                                                                                                                                    >  1:872552‑M2/1‑149 (MQ=255)
    ccTGTATCGGCCGTGGCTGCCGATTCATTAAGGGCTTGGTTTGATTTTTCGGGTGTGAACGATGGAAGAGCAAGGCACGGGTATCAGGGTCGAGGCGATGACAGCTGAGTATGCGCAACAGGCCAGGGCGTGGGCTGAACGCCTGggcct                                                                                                                                                <  2:1279672‑M2/150‑6 (MQ=255)
     cTGTATCGGCCGTGGCTGCCGATTCATTAAGGGCTTGGTTTGATTTTTCGGGTGTGAACGATGGAAGAGCAAGGCACGGGTATCAGGGTCGAGGCGATGACAGCTGAGTATGCGCAACAGGCCAGGGCGTGGGCTGAACGCCTGggcctg                                                                                                                                               <  1:576879‑M2/150‑7 (MQ=255)
     cTGTATCGGCCGTGGCTGCCGATTCATTAAGGGCTTGGTTTGATTTTTCGGGTGTGAACGATGGAAGAGCAAGGCACGGGTATCAGGGTCGAGGCGATGACAGCTGAGTATGCGCAACAGGCCAGGGCGTGGGCTGAACGCCTGggcctg                                                                                                                                               <  1:127632‑M2/150‑7 (MQ=255)
                     tGCCGATTCATTAAGGGCTTGGTTTGATTTTTTGTGTGTGAACGATGGAAGAGCAAGGCACGGGTATCAGGGTCGAGGCGATGACAGCTGAGTATGCGCAACAGGCCAGGGCGTGGGCTGAACGCCTGGGCCTGCCGCTGCAGGACGATa                                                                                                                               >  2:879814/1‑150 (MQ=255)
                     tGCCGATTCATTAAGGGCTTGGTTTGATTTTTCGGGTGTGAACGATGGAAGAGCAAGGCACGGGTATCAGGGTCGAGGCGATGACAGCTGAGTATGCGCAACAGGCCCAGGCGTTCAGCCCACGCCCTggcctgttgcgcatactcagct                                                                                                                               >  2:751191‑M2/1‑128 (MQ=255)
                       ccGATTCATTAAGGGCTTGGTTTGATTTTTCGGGTGTGAACGATGGAAGAGCAAGGCACGGGTATCGGGGTCGAGGCGATGACAGCTGAGTATGCGCAACAGGCCAGGGCGTGGGCTGAACGCCTGGGCCTGCCGCTGCAGGACGATAcc                                                                                                                             >  2:1096417/1‑150 (MQ=255)
                        cGATTCATTAAGGGCTTGGTTTGATTTTTCGGGTGTGAACGATGGAAGAGCAAGGCACGGGTATCAGGGTCGAGGCGATGACAGCTGAGTATGCGCAACAGGCCCAGGCGTTCAGCCCACGCCCTggcctgttgcgcatactcagctgtc                                                                                                                            <  2:876517‑M2/150‑26 (MQ=255)
                        cGATTCATTAAGGGCTTGGTTTGATTTTTCGGGTGTGAACGATGGAAGAGCAAGGCACGGGTATCAGGGTCGAGGCGATGACAGCTGAGTATGCGCAACAGGCCAGGGCGTGGGCTGAACGCCTGGGCCTGCCGCTGCAGGACGATAccg                                                                                                                            >  2:168328/1‑150 (MQ=255)
                             cATTAAGGGCTTGGTTTGATTTTTCGGGTGTGAACGATGGAAGAGCAAGGCACGGGTATCAGGGTCGAGGCGATGACAGCTGAGTATGCGCAACAGGCCCAGGCGTTCAGCCCACGCCCTggcctgttgcgcatactcagctgtcatcgc                                                                                                                       >  1:876517‑M2/1‑120 (MQ=255)
                                  aGGGCTTGGTTTGATTTTTCGGGTGTGAACGATGGAAGAGCAAGGCACGGGTATCAGGGTCGAGGCGATGACAGCTGAGTATGCGCAACAGGCCAGGGCGTGGGCTGAACGCCTGGGCCTGCCGCTGCAGGACGATACCGCCGCCTTcgc                                                                                                                  >  1:842170/1‑150 (MQ=255)
                                      cTTGGTTTGATTTTTCGGGTGTGAACGATGGAAGAGCAAGGCACGGGTATCAGGGTCGAGGCGATGACAGCTGAGTATGCGCAACAGGCCAGGGCGTGGGCTGAACGCCTGGGCCTGCCGCTGCAGGACGATACCGCCGCCTTCGCGGTg                                                                                                              <  1:23389/150‑1 (MQ=255)
                                       ttGGTTTGATTTTTCGGGTGTGAACGATGGAAGAGCAAGGCACGGGTATCAGGGTCGAGGCGATGACAGCTGAGTATGCGCAACAGGCCAGGGCGTGGGCTGAACGCCTGGGCCTGCCGCTGCAGGACGATACCGCCGCCTTCGCGGTGc                                                                                                             >  1:294535/1‑150 (MQ=255)
                                        tGGTTTGATTTTTCGGGTGTGAACGATGGAAGAGCAAGGCACGGGTATCAGGGTCGAGGCGATGACAGCTGAGTATGCGCAACAGGCCAGGGCGTGGGCTGAACGCCTGGGCCTGCCGCTGCAGGACGATACCGCCGCCTTCGCGGTGCa                                                                                                            <  1:573437/150‑1 (MQ=255)
                                           tttGATTTTTCGGGTGTGAACGATGGAAGAGCAAGGCACGGGTATCAGGGTCGAGGCGATGACAGCTGAGTATGCGCAACAGGCCAGGGCGTGGGCTGAACGCCTGGGCCTGCCGCTGCAGGACGATACCGCCGCCTTCGCGGTGCAGGt                                                                                                         >  1:1382223/1‑150 (MQ=255)
                                           tttGATTTTTCGGGTGTGAACGATGGAAGAGCAAGGCACGGGTATCAGGGTCGAGGCGATGACAGCTGAGTATGCGCAACAGGCCAGGGCGTGGGCTGAACGCCTGGGCCTGCCGCTGCAGGACGATACCGCCGCCTTCGCGGTGCAGGt                                                                                                         >  1:1313742/1‑150 (MQ=255)
                                             tGATTTTTCGGGTGTGAACGATGGAAGAGCAAGGCACGGGTATCAGGGTCGAGGCGATGACAGCTGAGTATGCGCAACAGGCCAGGGCGTGGGCTGAACGCCTGGGCCTGCCGCTGCAGGACGATACCGCCGCCTTCGCGGTGCAGGtag                                                                                                       >  2:1071357/1‑148 (MQ=255)
                                             tGATTTTTCGGGTGTGAACGATGGAAGAGCAAGGCACGGGTATCAGGGTCGAGGCGATGACAGCTGAGTATGCGCAACAGGCCAGGGCGTGGGCTGAACGCCTGGGCCTGCCGCTGCAGGACGATACCGCCGCCTTCGCGGTGCAGGTgg                                                                                                       <  1:993243/150‑1 (MQ=255)
                                                   ttCGGGTGTGAACGATGGAAGAGCAAGGCACGGGTATCAGGGTCGAGGCGATGACAGCTGAGTATGCGCAACAGGCCAGGGCGTGGGCTGAACGCCTGGGCCTGCCGCTGCAGGACGATACCGCCGCCTTCGCGGTGCAGGTGGGCGTCg                                                                                                 >  1:1164709/1‑150 (MQ=255)
                                                       ggTGTGAACGATGGGAGAGCAAGGCACGGGTATCAGGGTCGAGGCGATGACAGCTGAGTATGCGCAACAGGCCAGGGCGTGCGCTGAACGCCTGGGCCTGCCGCTGCAGGACGATACCGCCGCCTTCGCGGTGCAGGTGGGCGTCGACgg                                                                                             <  2:576879/150‑1 (MQ=255)
                                                          gtgAACGATGGAAGAGCAAGGCACGGGTATCAGGGTCGAGGCGATGACAGCTGAGTATGCGCAACAGGCCAGGGCGTGGGCTGAACGCCTGGGCCTGCCGCTGCAGGACGATACCGCCGCCTTCGCGGTGCAGGTGGGCGTCGACGGCtt                                                                                          >  1:1043210/1‑150 (MQ=255)
                                                           tgAACGATGGAAGAGCAAGGCACGGGTATCAGGGTCGAGGCGATGACAGCTGAGTATGCGCAACAGGCCAGGGCGTGGGCTGAACGCCTGggcctgttgcgcatactcag                                                                                                                                 >  2:1007805‑M2/1‑90 (MQ=255)
                                                           tgAACGATGGAAGAGCAAGGCACGGGTATCAGGGTCGAGGCGATGACAGCTGAGTATGCGCAACAGGCCAGGGCGTGGGCTGAACGCCTGggcctgttgcgcatactcag                                                                                                                                 <  1:1007805‑M2/110‑21 (MQ=255)
                                                             aaCGATGGAAGAGCAAGGCACGGGTATCAGGGTCGAGGCGATGACAGCTGAGTATGCGCAACAGGCCAGGGCGTGGGCTGAACGCCTGGGCCTGCCGCTGCAGGACGATACCGCCGCCTTCGCGGTGCAGGTGGGCGTCGACGGCTTGCa                                                                                       >  1:1025817/1‑150 (MQ=255)
                                                                gATGGAAGAGCAAGGCACGGGTATCAGGGTCGAGGCGATGACAGCTGAGTATGCGCAACAGGCCAGGGCGTGGGCTGAACGCCGGGGCCTGCCGCTGCAGGCCGATAACGCCGCCCTCGCGGTGCAGGTGGGCGTCGACGGCTTGCGGAt                                                                                    >  1:1384578/1‑150 (MQ=255)
                                                                           aaGGCACGGGTATCAGGGTCGAGGCGATGACAGCTGAGTATGCGCAACAGGCCAGGGCGTGGGCTGAACGCCTGGGCCTGCCGCTGCAGGACGATACCGCCGCCTTCGCGGTGCAGGTGGGCGTCGACGGCTTGCAGATTCAGCAACTgg                                                                         >  2:1195862/1‑150 (MQ=255)
                                                                             ggCACGGGTATCAGGGTCGAGGCGATGACAGCTGAGTATGCGCAACAGGCCAGGGCGTGGGCTGAACGCCTGGGCCTGCCGCTGCAGGACGATACCGCCGCCTTCGCGGTGCAGGTGGGCGTCGACGGCTTGCAGATTCAGCAACTGGGc                                                                       <  2:1185626/150‑1 (MQ=255)
                                                                              gCACGGGTATCAGGGTCGAGGCGATGACAGCTGAGTATGCGCAACAGGCCAGGGCGTGGGCTGAACGCCTGGGCCTGCCGCTGCAGGACGATACCGCCGCCTTCGCGGTGCAGGTGGGCGTCGACGGc                                                                                            >  1:908499/1‑128 (MQ=255)
                                                                              gCACGGGTATCAGGGTCGAGGCGATGACAGCTGAGTATGCGCAACAGGCCAGGGCGTGGGCTGAACGCCTGGGCCTGCCGCTGCAGGACGATACCGCCGCCTTCGCGGTGCAGGTGGGCGTCGACGGc                                                                                            <  2:908499/128‑1 (MQ=255)
                                                                                aCGGGTATCAGGGTCGAGGCGATGACAGCTGAGTATGCGCAACAGGCCAGGGCGTGGGCTGAACGCCTGGGCCTGCCGCTGCAGGACGATACCGCCGCCTTCGCGGTGCAGGTGGGCGTCGACGGCTTGCAGATTCAGCAACTGGGCCCg                                                                    >  2:856828/1‑150 (MQ=255)
                                                                                aCGGGTATCAGGGTCGAGGCGATGACAGCTGAGTATGCGCAACAGGCCAGGGCGTGGGCTGAACGCCTGGGCCTGCCGCTGCAGGACGATACCGCCGCCTTCGCGGTGCAGGTGGGCGTCGACGGCTTGCAGATTCAGCAACTGGGCCCg                                                                    >  1:663578/1‑150 (MQ=255)
                                                                                    gTATCAGGGTCGAGGCGATGACAGCTGAGTATGCGCAACAGGCCAGGGCGTGGGCTGAACGCCTGGGCCTGCCGCTGCAGGACGATACCGCCGCCTTCGCGGTGCAGGTGGGCGTCGACGGCTTGCAGATTCAGCAACTGGGCCCGCAgg                                                                >  1:122562/1‑150 (MQ=255)
                                                                                          gggTCGAGGCGATGACAGCTGAGTATGCGCAACAGGCCAGGGCGTGGGCTGAACGCCTGGGCCTGCCGCTGCAGGACGATACCGCCGCCTTCGCGGTGCAGGTGGGCGTCGACGGCTTGCAGATTCAGCAACTgg                                                                         >  1:378284/1‑135 (MQ=255)
                                                                                          gggTCGAGGCGATGACAGCTGAGTATGCGCAACAGGCCAGGGCGTGGGCTGAACGCCTGGGCCTGCCGCTGCAGGACGATACCGCCGCCTTCGCGGTGCAGGTGGGCGTCGACGGCTTGCAGATTCAGCAACTgg                                                                         <  2:378284/135‑1 (MQ=255)
                                                                                             tCGAGGCGATGACAGCTGAGTATGCGCAACAGACCAGGGCGTGGGCTGAACGCCTGGGCCTGCCGCTGCAGGACGATACCGCCGCCTTCGCGGTGCAGGTGGGCGTCGACGGCTTGCAGATTCAGCAACTGGGCCCGCAGGCGCCTGGGc                                                       >  1:629980/1‑150 (MQ=255)
                                                                                               gAGGCGATGACAGCTGAGTATGCGCAACAGGCCAGGGCGTGGGCTGAACGCCTGGGCCTGCCGCTGCAGGACGATACCGCCGCCTTCGCGGTGCAGGTGGGCGTCGACGGCTTGCAGAtt                                                                                   <  1:238813/120‑1 (MQ=255)
                                                                                               gAGGCGATGACAGCTGAGTATGCGCAACAGGCCAGGGCGTGGGCTGAACGCCTGGGCCTGCCGCTGCAGGACGATACCGCCGCCTTCGCGGTGCAGGTGGGCGTCGACGGCTTGCAGAtt                                                                                   >  2:238813/1‑120 (MQ=255)
                                                                                                   cGATGACAGCTGAGTATGCGCAACAGGCCAGGGCGTGGGCTGAACGCCTGGGCCTGCCGCTGCAGGACGATACCGCCGCCTTCGCGGTGCAGGTGGGCGTCGACGGCTTGCAGATTCAGCAACTGGGCCCGCAGGCGCCTGGGCCGGTGc                                                 <  1:516513/150‑1 (MQ=255)
                                                                                                    gATGACAGCTGAGTATGCGCAACAGGCCAGGGCGTGGGCTGAACGCCTGGGCCTGCCGCTGCAGGACGATACCGCCGCCTTCGCGGTGCAGGTGGGCGTCGACGGCTTGCAGATTCAGCAACTGGGCCCGCAGGCGCCTGGGCCGGTGCg                                                >  2:641478/1‑150 (MQ=255)
                                                                                                    gATGACAGCTGAGTATGCGCAACAGGCCAGGGCGTGGGCTGAACGCCTGGGCCTGCCGCTGCAGGACGATACCGCCGCCTTCGCGGTGCAGGTGGGCGTCGACGGCTTGCAGATTCAGCAACTGGGCCCGCAGGCGCCTGGGCCGGTGCg                                                >  2:1350504/1‑150 (MQ=255)
                                                                                                      tGACAGCTGAGTATGCGCAACAGGCCAGGGCGTGGGCTGAACGCCTGGGCCTGCCGCTGCAGGACGATACCGCCGCCTTCGCGGTGCAGGTGGGCGTCGACGGCTTGCAGATTCAGCAACTGGGCCCGCAGGCGCCTGGGCCGGTGCgtg                                              <  2:1382223/150‑1 (MQ=255)
                                                                                                          aGCTGAGTATGCGCAACAGGCCAGGGCGTGGGCTGAACGCCTGGGCCTGCCGCTGCAGGACGATACCGCCGCCTTCGCGGTGCAGGTGGGCGTCGACGGCTTGCAGATTCAGCAACTGGGCCCGCAGGCGCCTGGGCCGGTGCgtgt                                             <  1:1235358/147‑1 (MQ=255)
                                                                                                          aGCTGAGTATGCGCAACAGGCCAGGGCGTGGGCTGAACGCCTGGGCCTGCCGCTGCAGGACGATACCGCCGCCTTCGCGGTGCAGGTGGGCGTCGACGGCTTGCAGATTCAGCAACTGGGCCCGCAGGCGCCTGGGCCGGTGCgtgt                                             <  1:1235380/147‑1 (MQ=255)
                                                                                                          aGCTGAGTATGCGCAACAGGCCAGGGCGTGGGCTGAACGCCTGGGCCTGCCGCTGCAGGACGATACCGCCGCCTTCGCGGTGCAGGTGGGCGTCGACGGCTTGCAGATTCAGCAACTGGGCCCGCAGGCGCCTGGGCCGGTGCgtgt                                             >  2:1235358/1‑147 (MQ=255)
                                                                                                          aGCTGAGTATGCGCAACAGGCCAGGGCGTGGGCTGAACGCCTGGGCCTGCCGCTGCAGGACGATACCGCCGCCTTCGCGGTGCAGGTGGGCGTCGACGGCTTGCAGATTCAGCAACTGGGCCCGCAGGCGCCTGGGCCGGTGCgtgt                                             >  2:1235380/1‑147 (MQ=255)
                                                                                                             tGAGTATGCGCAACAGGCCAGGGCGTGGGCTGAACGCCTGGGCCTGCCGCTGCAGGACGATACCGCCGCCTTCGCGGTGCAGGTGGGCGTCGACGGCTTGCAGATTCAGCAACTGGGCCCGCAGGCGCCTGGGCCGGTGCGTGTGGACtt                                       >  1:631903/1‑150 (MQ=255)
                                                                                                               aGTATGCGCAACAGGCCAGGGCGTGGGCTGAACGCCTGGGCCTGCCGCTGCAGGACGATACCGCCGCCTTCGCGGTGCAGGTGGGCGTCGACGGCTTGCAGATTCAGCAACTGGGCCCGCAGGCGCGTGGGCCGGTTCGTGTGGACTtcg                                     >  2:708367/1‑150 (MQ=255)
                                                                                                               aGTATGCGCAACAGGCCAGGGCGTGGGCTGAACGCCTGGGCCTGCCGCTGCAGGACGATACCGCCGCCTTCGCGGTGCAGGTGGGCGTCGACGGCTTGCAGATTCAGCAACTGGGCCCGCAGGCGCCTGGGCCGGTGCGTGTGGACTtcg                                     <  2:294535/150‑1 (MQ=255)
                                                                                                                 tATGCGCAACAGGCCAGGGCGTGGGCTGAACGCCTGGGCCTGCCGCTGCAGGACGATACCGCCGCCTTCGCGGTGCAGGTGGGCGTCGACGGCTTGCAGATTCAGCAACTGGGCCCGCAGGCGCCTGGGCCGGTGCGTGTGGACTtcgtc                                   >  2:627630/1‑150 (MQ=255)
                                                                                                                    gcgcAACAGGCCAGGGCGTGGGCTGAACGCCTGGGCCTGCCGCTGCAGGACGATACCGCCGCCTTCGCGGTGCAGGTGGGCGTCGACGGCTTGCAGATTCAGCAACTGGGc                                                                       <  1:1074915/111‑1 (MQ=255)
                                                                                                                    gcgcAACAGGCCAGGGCGTGGGCTGAACGCCTGGGCCTGCCGCTGCAGGACGATACCGCCGCCTTCGCGGTGCAGGTGGGCGTCGACGGCTTGCAGATTCAGCAACTGGGc                                                                       >  2:1074915/1‑111 (MQ=255)
                                                                                                                    gcgcAACAGGCCAGGGCGTGGGCTGAACGCCTGGGCCTGCCGCTGCAGGACGATACCGCCGCCTTCGCGGTGCAGGTGGGCGTCGACGGCTTGCAGATTCAGCAACTGGGCCCGCAGGCGCCTg                                                          >  1:581859/1‑124 (MQ=255)
                                                                                                                    gcgcAACAGGCCAGGGCGTGGGCTGAACGCCTGGGCCTGCCGCTGCAGGACGATACCGCCGCCTTCGCGGTGCAGGTGGGCGTCGACGGCTTGCAGATTCAGCAACTGGGCCCGCAGGCGCCTg                                                          <  2:581859/124‑1 (MQ=255)
                                                                                                                    gcgcAACAGGCCAGGGCGTGGGCTGAACGCCTGGGCCTGCCGCTGCAGGACGATACCGCCGCCTTCGCGGTGCAGGTGGGCGTCGACGGCTTGCAGATTCAGCAACTGGGCCCGCAGGCGCCTGGGCCGGTGCGTGTGGACTTCGTCGaa                                <  2:127632/150‑1 (MQ=255)
                                                                                                                    gcgcAACAGGCCAGGGCGTGGGCTGAACGCCTGGGCCTGCCGCTGCAGGACGATACCGCCGCCTTCGCGGTGCAGGTGGGCGTCCACGGCTTGCAGATTCAGCAACTGGGCCCGCAGGCGCCTGGGCCGGTGCGTGTGGACTTCGTCGaa                                <  2:1022239/150‑1 (MQ=255)
                                                                                                                        aaCAGGCCAGGGCGTGGGCTGAACGCCTGGGCCTGCCGCTGCAGGACGATACCGCCGCCTTCGCGGTGCAGGTGGGCGTCGACGGCTTGCAGATTCAGCAACTGGGCCCGCAGGCGCCTGGGCCGGTGCGTGTGGACTTCGTCGAAGGTc                            >  1:871450/1‑150 (MQ=255)
                                                                                                                         aCAGGCCAGGGCGTGGGCTGAACGCCTGGGCCTGCCGCTGCAGGACGATACCGCCGCCTTCGCGGTGCAGGTGGGCGTCGACGGCTTGCAGATTCAGCAACTGGGCCCGCAGGCGCCTGGGCCGGTGCGTGTGGACTTCGTCGAAGGTCa                           >  2:791458/1‑150 (MQ=255)
                                                                                                                           aGGCCAGGGCGTGGGCTGAACGCCTGggcctgttgcgcatactcagctgtcatcgcctcgaccctgatacccgtgccttgctcttccatcgttcacacccgaaaaatcaaaccaagcccttaatgaatcggcagccacggccgatacagg                         <  2:1099981‑M2/150‑125 (MQ=255)
                                                                                                                            ggCCAGGGCGTGGGCTGAACGCCTGGGCCTGCCGCTGCAGGACGATACCGCCGCCTTCGCGGTGCAGGTGGGCGTCGACGGCtt                                                                                          <  2:221066/84‑1 (MQ=255)
                                                                                                                            ggCCAGGGCGTGGGCTGAACGCCTGGGCCTGCCGCTGCAGGACGATACCGCCGCCTTCGCGGTGCAGGTGGGCGTCGACGGCtt                                                                                          >  1:221066/1‑84 (MQ=255)
                                                                                                                             gCCAGGGCGTGGGCTGAACGCCTGGGCCTGCCGCTGCAGGACGATACCGCCGCCTTCGCGGTGCAGGTGGGCGTCGACGGCTTGCAGATTCAGCAACTgg                                                                         >  1:702539/1‑100 (MQ=255)
                                                                                                                             gCCAGGGCGTGGGCTGAACGCCTGGGCCTGCCGCTGCAGGACGATACCGCCGCCTTCGCGGTGCAGGTGGGCGTCGACGGCTTGCAGATTCAGCAACTgg                                                                         <  2:702539/100‑1 (MQ=255)
                                                                                                                              ccAGGGCGTGGGCTGAACGCCTGggcctgttgcgcatactcagctgtcatcgcctcgaccctgatacccgtgccttgctcttccatcgttcacacccgaaaaatcaaaccaagcccttaatgaatcggcagccacggccgatacaggcaa                      >  1:1099981‑M2/1‑23 (MQ=255)
                                                                                                                              ccAGGGCGTGGGCTGAACGCCTGGGCCTGCCGCTGCAGGACGATACCGCCGCCTTCGCGGTGCAGGTGGGCGTCGACGGCTTGCAGATTCAGCAACTGGGCCCGCAGGCGCCTGGGCCGGTGCgtgt                                             <  1:896571/127‑1 (MQ=255)
                                                                                                                              ccAGGGCGTGGGCTGAACGCCTGGGCCTGCCGCTGCAGGACGATACCGCCGCCTTCGCGGTGCAGGTGGGCGTCGACGGCTTGCAGATTCAGCAACTGGGCCCGCAGGCGCCTGGGCCGGTGCgtgt                                             >  2:896571/1‑127 (MQ=255)
                                                                                                                               cAGGGCGTGGGCTGAACGCCTGGGCCTGCCGCTGCAGGACGATACCGCCGCCTTCGCGGTGCAGGTGGGCGTCGACGGCTTGCAGATTCAGCAACTGGGCCCGCAGGCGCCTGGGCCGGTGCGTGTGGACTTCGTCGAAGGTCAGGCTgc                     >  2:707510/1‑150 (MQ=255)
                                                                                                                               cAGGGCGTGGGCTGAACGCCTGGGCCTGCCGCTGCAGGACGATACCGCCGCCTTCGCGGTGCAGGTGGGCGTCGACGGCTTGCAGATTCAGCAACTGGGCCCGCAGGCGCCTGGGCCGGTGCGTGTGGACTTCGTCGAAGGTCAGGCTgc                     <  2:1313742/150‑1 (MQ=255)
                                                                                                                                        ggCTGAACGCCTGGGCCTGCCGCTGCAGGACGATACCGCCGCCTTCGCGGTGCAGGTGGGCGTCGACGGCTTGCAGATTCAGCAACTGGGCCCGCAGGCGCCTGGGCCGGTGCGTGTGGACTTCGTCGAAGGTCAGGCTGCGCATcgccg            >  2:509874/1‑150 (MQ=255)
                                                                                                                                        ggCTGAACGCCTGGGCCTGCCGCTGCAGGACGATACCGCCGCCTTCGCGGTGCAGGTGGGCGTCGACGGCTTGCAGATTCAGCAACTGGGCCCGCAGGCGCCTGGGCCGGTGCGTGTGGACTTCGTCGAAGGTCAGGCTGCGCATcgccg            >  2:1025694/1‑150 (MQ=255)
                                                                                                                                            tGAACGCCTGGGCCTGCCGCTGCAGGACGATACCGCCGCCTTCGCGGTGCAGGTGGGCGTCGACGGCTTGCAGATTCAGCAACTGGGCCCGCAGGCGCCTGGGCCGGTGCGTGTGGACTTCGTCGAAGGTCAGGCTGCGCATCGCCGCCa         >  1:1183642/1‑150 (MQ=255)
                                                                                                                                             gAACGCCTGGGCCTGCCGCTGCAGGACGATACCGCCGCCTTCGCGGTGCAGGTGGGCGTCGACGGCTTGCAGATTCAGCAACTGGGCCCGCAGGCGCCTGGGCCGGTGCGTGTGGACTTCGTCGAAGGTCAGGCTGCGCATCGCCGCCAg        >  2:372230/1‑150 (MQ=255)
                                                                                                                                              aaCGCCTGGGCCTGCCGCTGCAGGACGATACCGCCGCCTTCGCGGTGCAGGTGGGc                                                                                                     >  1:165928/1‑56 (MQ=255)
                                                                                                                                              aaCGCCTGGGCCTGCCGCTGCAGGACGATACCGCCGCCTTCGCGGTGCAGGTGGGc                                                                                                     <  2:165928/56‑1 (MQ=255)
                                                                                                                                              aaCGCCTGGGCCTGCCGCTGCAGGACGATACCGCCGCCTTCGCGGCGCAGGTGGCCGTCGACGGCTTGCAGATTCAGCAACTCGGCCCGCAGGCCCCTGGGCCGGTGCGTGTGGACTTCCTCGAAGGCCAGGCGGCCCAGCGCCGCCAGt       >  2:52197/1‑150 (MQ=255)
                                                                                                                                                  ccTGGGCCTGCCGCTGCAGGACGATACCGCCGCCTTCGCGGTGCAGGTGGGCGTCGACGGCTTGCAGATTCAGCAACTGGGCCCGCAGGCGCCTGGGCCGGTGCGTGTGGACTTCGTCGAAGGTCAGGCTGCGCATCGCCGCCAGTTTgg   <  2:122562/150‑1 (MQ=255)
                                                                                                                                                   cTGGGCCTGCCGCTGCAGGACGATACCGCCGCCTTCGCGGTGCAGGTGGGCGTCGACGGCTTGCAGATTCAGCAACTGGGCCCGCAGGCGCCTGGGCCGGTGCGTGTGGACTTCGTCGAAGGTCAGGCTGCGCATCGCCGCCAGTTTgtg  >  1:16299/1‑148 (MQ=255)
                                                                                                                                                     |                                                                                                                                                   
ATTGCCTGTATCGGCCGTGGCTGCCGATTCATTAAGGGCTTGGTTTGATTTTTCGGGTGTGAACGATGGAAGAGCAAGGCACGGGTATCAGGGTCGAGGCGATGACAGCTGAGTATGCGCAACAGGCCAGGGCGTGGGCTGAACGCCTGGGCCTGCCGCTGCAGGACGATACCGCCGCCTTCGCGGTGCAGGTGGGCGTCGACGGCTTGCAGATTCAGCAACTGGGCCCGCAGGCGCCTGGGCCGGTGCGTGTGGACTTCGTCGAAGGTCAGGCTGCGCATCGCCGCCAGTTTGGC  >  NC_002947/1717279‑1717574

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.