New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 2056006 =72 (1.370)3 (0.070) 3/214 NT 5.2% intergenic (+12/‑131) aroC/PP_1831 chorismate synthase/membrane protein
?NC_002947 2056112 = 47 (1.030)intergenic (+118/‑25) aroC/PP_1831 chorismate synthase/membrane protein

GAATACCCCGGTGCTGGGCCAGCGCTGATCCAACTGCAACGGCCTCTTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTCTATTTCGCCCTGCTGGGCTCCACCGCACCGTTCCTGGCGCTGTACTTCGACCACCTGGGCTTTTCCCCGGCGCGCA  >  NC_002947/2055967‑2056257
                                                                                                                                                 |                                                                                                                                                 
gAATACCCCGGTGCTGGGCCAGCGCTGATCCAACTGCAACGGCCTCTTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCa                                                                                                                                               <  1:1009300/150‑1 (MQ=255)
 aaTACCCCGGTGCTGGGCCAGCGCTGATCCAACTGCAACGGCCTCTTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAg                                                                                                                                              <  2:241754/150‑1 (MQ=255)
 aaTACCCCGGTGCTGGGCCAGCGCTGATCCAACTGCAACGGCCTCTTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAg                                                                                                                                              <  1:632389/150‑1 (MQ=255)
      cccGGTGCTGGGCCAGCGCTGATCCAACTGCAACGGCCACTTCGCGGNGAAACCCGCTCGTACACTGGGATATCACCGCCCTCAGGGGCAGGGACCGAACCAAAACCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCGGGCCCAGGGccc                                                                                                                                         >  1:448207/1‑150 (MQ=255)
      cccGGTGCTGGGCCAGCGCTGATCCAACTGCAACGCCCTCTTCGGGAGTATACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAAGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTccc                                                                                                                                         >  1:1097569/1‑150 (MQ=39)
      cccGGTGCTGGGCCAGCGCCGATCCAACTGCAACGGCCTCTTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTccc                                                                                                                                         <  2:936451/150‑1 (MQ=255)
         ggTGCTCGGCCAGCACTGCCACAACTGCAACCGCCTCTTCGCGGGTACCCACGCCCCTACATTCGGATATCACTACCCCCAGGTGCACTGCCACGGCCAAATCCCCGTGGCAGCGGGTTCACCCGCGAAGATGCCGCCCCACGCCCCcac                                                                                                                                      >  2:3354/1‑150 (MQ=255)
           tGCTGGGCCAGCGCTGATCCAACTGCAACGGCCTCTTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACaa                                                                                                                                    <  2:535700/150‑1 (MQ=255)
             cTGGGCCAGCGCTGATCCAACTGCAACGGCCTCTTCGCGAGAAACCCCCCCATTACATTTGGATATCACGGCCCTCAGTTGCAGTTACATGTTGAAATCCGCGTCGAAGCGCGTTCACCCGCGCAGCGGCCGGCCCAGGTCCCCCCACgg                                                                                                                                  >  2:1368256/1‑150 (MQ=255)
                  ccAGCGCTGATCCAACTGCAACGGCCTCTTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCAcc                                                                                                                             <  2:985479/150‑1 (MQ=255)
                  ccAGCGCTGATCCAACTGCAACGGCCTCTTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCAcc                                                                                                                             >  1:1246313/1‑150 (MQ=255)
                     gcgcTGATCCAACTGCAACGGCCTCTTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCa                                                                                                                          >  2:548374/1‑150 (MQ=255)
                     gcgcTGATCCAACTGCAACGGCCTCTTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCa                                                                                                                          >  1:624158/1‑150 (MQ=255)
                       gcTGATCCAACTGCAACGGCCTCTTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGAAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATg                                                                                                                        >  2:10427/1‑150 (MQ=255)
                          gATCCAACTGCAACGGCCTCTTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCaa                                                                                                                     >  1:546185/1‑150 (MQ=255)
                            tCCAACTGCAACGGCCTCTTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAAcc                                                                                                                   <  2:1097569/150‑1 (MQ=255)
                                  tGCAACGGCCTCTTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATccc                                                                                                             <  2:546185/150‑1 (MQ=255)
                                     aaCGGCCTCTTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTa                                                                                                          >  2:833722/1‑150 (MQ=255)
                                     aaCGGCCTCTTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTa                                                                                                          <  1:833722/150‑1 (MQ=255)
                                      aCGGCCTCTTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTAc                                                                                                         <  1:699211/150‑1 (MQ=255)
                                         cctTCTTCGCGGGTAAACCCGCTCCTACATTGGGATATCACGGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGCGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTgg                                                                                                      >  2:181946‑M1/4‑150 (MQ=255)
                                         GCCTCTTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTgg                                                                                                      >  1:10427‑M1/1‑150 (MQ=255)
                                            TCTTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGgcgc                                                                                                   <  2:852093‑M1/150‑1 (MQ=255)
                                                     GTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGc                                                                                          >  1:947878‑M1/1‑150 (MQ=255)
                                                     GTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGc                                                                                          <  2:1287038‑M1/150‑1 (MQ=255)
                                                      TAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCt                                                                                         <  1:1394833‑M1/150‑1 (MQ=255)
                                                      TAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGCGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCt                                                                                         >  1:1155181‑M1/1‑150 (MQ=255)
                                                         ccccGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCt                                                                                      <  2:298824/149‑1 (MQ=255)
                                                         aCCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCt                                                                                      >  1:855331/1‑150 (MQ=255)
                                                          cccgctcctacgcggatttcaccctgtcactgcacctgagggcagtgatatcccaatgtaggagcgggtttacccgcgaagaggccgGCCCAGGTCCCCACAAGGCCACCCCATGCAAc                                                                                                                    <  1:537638‑M2/32‑1 (MQ=255)
                                                          cccgctcctacgcggatttcaccctgtcactgcacctgagggcagtgatatcccaatgtaggagcgggtttacccgcgaagaggccgGCCCAGGTCCCCACAAGGCCACCCCATGCAAc                                                                                                                    >  2:537638‑M2/88‑119 (MQ=255)
                                                           ccgctcctacgcggatttcaccctgtcactgcacctgagggcagtgatatcccaatgtaggagcgggtttacccgcgaagaggccgGCCCAGGTCCCCACAAGTCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTAc                                                                                    >  2:297738‑M2/87‑150 (MQ=255)
                                                           ccGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTAc                                                                                    <  1:548374/150‑1 (MQ=255)
                                                           ccGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTAc                                                                                    <  2:813692/150‑1 (MQ=255)
                                                                 cTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTccc                                                                                                                                         <  2:413198/91‑1 (MQ=255)
                                                                 cTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTccc                                                                                                                                         >  1:413198/1‑91 (MQ=255)
                                                                     aTTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTc                                                                                       >  1:357911/1‑137 (MQ=255)
                                                                     aTTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTc                                                                                       <  2:357911/137‑1 (MQ=255)
                                                                     aTTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTCTAtt                                                                          >  1:227183/1‑150 (MQ=255)
                                                                                aCTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTCTATTTCGCCctgctg                                                               >  2:35571/1‑150 (MQ=255)
                                                                                 cTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAACGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTCTATTTCGCCCTGCTgg                                                              >  1:1361505/1‑150 (MQ=255)
                                                                                  tGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTCTATTTCGCCCTGCTggg                                                             <  1:285803/150‑1 (MQ=255)
                                                                                            tGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTCTATTTCGCCCTGCTgg                                                              >  2:973957/1‑139 (MQ=255)
                                                                                            tGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTCTATTTCGCCCTGCTgg                                                              <  1:973957/139‑1 (MQ=255)
                                                                                            tGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCAGGCCCAGGTCCCAACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTCTATTTCGGCGCGCTGGtctcagacgtt                                                   >  2:660344/1‑143 (MQ=255)
                                                                                                  gACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTCTATTTCGCCCTGCTGGGCTCCACCGCACCGTTc                                             <  1:1250095/150‑1 (MQ=255)
                                                                                                    cAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTCTATTTCGCCCTGCTGGGCTCCACCGCACCGTTCCt                                           <  2:1246313/150‑1 (MQ=255)
                                                                                                     aGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGgcgc                                                                                                   >  1:1079705/1‑93 (MQ=255)
                                                                                                     aGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGgcgc                                                                                                   <  2:1079705/93‑1 (MQ=255)
                                                                                                       ggTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGTAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTCTATTTCGCCCTGCTGGGCTCCACCGCACCGTTCCTGgc                                        >  2:721262/1‑150 (MQ=255)
                                                                                                       ggTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTCTATTTCg                                                                       <  1:46193/119‑1 (MQ=255)
                                                                                                       ggTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTCTATTTCg                                                                       >  2:46193/1‑119 (MQ=255)
                                                                                                           aaaTCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGgcgc                                                                                                   >  2:489941/1‑87 (MQ=255)
                                                                                                           aaaTCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGgcgc                                                                                                   <  1:489941/87‑1 (MQ=255)
                                                                                                               ccGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTCTATTTCGCCCTGCTGGGCTCCACCGCACCGTTCCTGGCGCTGTACt                                <  2:1375962/150‑1 (MQ=255)
                                                                                                                   gTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTCTATTTCGCCCTGCTGGGCTCCACCGCACCGTTCCTGGCGCTGTACTTCGa                            <  1:852093/150‑1 (MQ=255)
                                                                                                                        aGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGTCTCCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTCTATTTCGCCCTGCTGGGCTCCACCGCACCGTTCCTGGCGCTGTACTTCGaccacc                       <  1:660344/150‑1 (MQ=255)
                                                                                                                         gCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTCTATTTCGCCCTGCTGGGCTCCACCGCACCGTTCCTGGCGCTGTACTTCGACCACCt                      >  2:471770/1‑150 (MQ=255)
                                                                                                                                  cccgcgaagaggccgGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTCTATTTCGCCCTGCTGGGCTCCACCGCACCGTTCCTGGCGCTGTACTTCGACCACCTGGGCTTTTc             <  2:624158‑M2/135‑1 (MQ=255)
                                                                                                                                   ccgcgaagaggcctGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTc                                                                                              <  2:702535‑M2/54‑1 (MQ=255)
                                                                                                                                   ccgcgaagaggccgGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTc                                                                                              >  1:702535‑M2/15‑68 (MQ=255)
                                                                                                                                   ccgcgaagaggccgGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTCTAtt                                                                          <  1:1285594‑M2/74‑1 (MQ=255)
                                                                                                                                   ccgcgaagaggccgGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTCTAtt                                                                          >  2:1285594‑M2/15‑88 (MQ=255)
                                                                                                                                   ccgcgaagaggccgGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTCTATTTCGCCCTGCTGGGCTCCACCGCACCGTTCCTGGCGCTGTCATTCGACCACCTGGGCTTTTcc            >  1:783840‑M2/15‑150 (MQ=255)
                                                                                                                                          gaggccgGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTCTATTTCGCCCTGCTGGGCTCCACCGCACCGTTCCTGGCGCTGTACTTCGACCACCTGGGCTTTTCCCCGgcgc     <  1:471770‑M2/143‑1 (MQ=255)
                                                                                                                                          gaggccgGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTCTATTTCGCCCTGCTGGGCTCCACCGCACCGTTCCTGGCGCTGTACTTCGACCACCTGGGCTTTTCCCCGgcgc     >  1:424358‑M2/8‑150 (MQ=255)
                                                                                                                                             gccgGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTCTATTTCGCCCTGCTGGGCTCCACCGCACCGTTCCTGGCGCTGTACTTCGACCACCTGGGCTTTTCCCCggcgcgcc  >  2:231913‑M2/5‑149 (MQ=255)
                                                                                                                                             gccgGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTCTATTTCGCCCTGCTGGGCTCCACCGCACCGTTCCTGGCGCTGTACTTCGACCACCTGGGCTTTTCCCCGGCGCGCa  >  1:464790‑M2/5‑150 (MQ=255)
                                                                                                                                                 |                                                                                                                                                 
GAATACCCCGGTGCTGGGCCAGCGCTGATCCAACTGCAACGGCCTCTTCGCGGGTAAACCCGCTCCTACATTGGGATATCACTGCCCTCAGGTGCAGTGACAGGGTGAAATCCGCGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGCCCAGGTCCCCACAAGGCCACCCCATGCAACCCATCCCCTACTGGCGCCTGTCCAGCTTCTACCTGTTCTATTTCGCCCTGCTGGGCTCCACCGCACCGTTCCTGGCGCTGTACTTCGACCACCTGGGCTTTTCCCCGGCGCGCA  >  NC_002947/2055967‑2056257

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.