| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5359413 = | 48 (0.910) | 4 (0.080) | 4/228 | NT | 9.6% | coding (905/1482 nt) | nusA | transcription termination/antitermination factor L |
| ? | NC_002947 | 5359462 = | 31 (0.640) | coding (856/1482 nt) | nusA | transcription termination/antitermination factor L | |||||
GCCGGTCAACTGACTGGCCAGGCGAACGTTCTGACCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATCGTCCCAAAGGACGATATCCACACGCTCACCACCCAGCTCCCCGGATACGGCCTGGACGCGCGAACCACGCATGCCGATGCAGGCACCTTGCGGGTCGATACGCTTGTCCTTGGAGCGGACGGCAATCTTGG > NC_002947/5359313‑5359611 | gCCGGTCAACTGACTGGCCAGGCGAACGTTCTGACCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGAc < 1:1322009/150‑1 (MQ=255) atcggcatgcgtggttcgcgcgtcgaggccgtatccggggagctgggtggtgagcgtgtggatatcgtcctttgggacgataacccggcgcagttcgTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGaa > 2:561174‑M1/98‑150 (MQ=255) cAGGCGAACGTGCTGACCGCCACGGCCAGTGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATc < 2:1035600/150‑1 (MQ=255) gCGAACGTTCTGACCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATCGTc < 1:1077710/150‑1 (MQ=255) cGAACGTTCTGACCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATCGTcc < 1:227645/150‑1 (MQ=255) gAACGTTCTGACCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATCGTccc < 2:1346862/150‑1 (MQ=255) aaCGTTCTGCCCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATCGTCCCa > 2:451769/1‑150 (MQ=255) cTGACCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTAGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATCGCGTTGATGACGAACTGCGCCGGGTTATCGTCCCAAAGGAc < 2:1378190/150‑1 (MQ=255) aCCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATCGTCCCAAAGGACGat > 1:607629/1‑150 (MQ=255) ccACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATCGTCCCAAAGGACGATATcc < 2:1163679/150‑1 (MQ=255) cAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATCGTCCCAAAGGACGATATCCACACGCt > 2:1252158/1‑150 (MQ=255) tGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATCGTCCCAAAGGACGATATCCACACGCTcac < 2:607629/150‑1 (MQ=255) tGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATCGTCCCAAAGGACGATATCCACACGCTCACCAccc > 2:1010930/1‑150 (MQ=255) ggCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATCGTCCCAAAGGACGATATCCACACGCTCACCACCCAg < 1:1331479/150‑1 (MQ=255) ggCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATCGTCCCAAAGGACGATATCCACACGCTCACCACCCAg > 2:1222033/1‑150 (MQ=255) ccTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATCGTCCCAAAGGACGATATCCACACGCTCACCACCCAGCTCCCCGGATa < 1:1222033/150‑1 (MQ=255) cTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATCGTCCCAAAGGACGATATCCACACGCTcaccac > 1:250166/1‑134 (MQ=255) cTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATCGTCCCAAAGGACGATATCCACACGCTcaccac < 2:250166/134‑1 (MQ=255) tggcgaTGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATCGTCCCAAAGGACGATATCCACACGCTCACCACCCAGCTCCCCGGATACGGCCTGGa < 1:451769/149‑1 (MQ=255) ggcgaTGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATCGTCCCAAAGGACGATATCCACACGCTCACCACCCAGCTCCCCGGATACGGCCTGGAc > 2:1104767/1‑150 (MQ=255) gcccatgccatgGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATCGTCCCAAAGGACGATATCCACACGCTCACCACCCAGCTCCCCGGATACGGCCTGGACGCGCGa > 2:249192/3‑150 (MQ=255) ccATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATCGTCCCAAAGGACGATATCCACACGCTCACCACCCAGGTCCCCGGATACGGCCTGGACGCGCGAAc > 1:1071301/1‑150 (MQ=255) catggcatggGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACt > 1:306886/1‑71 (MQ=255) catggcatggGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACt < 2:306886/71‑1 (MQ=255) gcatggGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATCGTCCCAAAGGACGATATCCACACGCTCACCACCCAGCTCCCCGGATACGGCCTGGACGCGCGAACCACGc < 2:1071301/150‑1 (MQ=255) ttcgtcatcaacgccatgtcgccggctgaagtcgcggcgatcatcgttgatgaCGAACTGCGCCGGGTTATCGTCCCAAAGGACGATATCCACACGCTCACCACCCAGCTCCCCGGATACGGCCTCGACGCGCGAACCACGCATGCCGAt > 2:561174‑M2/54‑150 (MQ=255) aTCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATCGTCCCAAAGGACGATATCCACACGCTCACCACCCAGCTCCCCGGATACGGCCTGGACGCGCGAACCACGCATGCCGAt > 2:741455/1‑150 (MQ=255) TCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATCGTCCCAAAGGACGATATCCACACGCTCACCACCCAGCTCCCCGGATACGGCCTGGACGCGCGAACCACGCATGCCGa < 2:90180‑M1/145‑1 (MQ=255) TCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATCGTCCCAAAGGACGATATCCACACGCTCACCACCCAGCTCCCCGGATACGGCCTGGACGCGCGAACCACGCATGCCGa > 1:90180‑M1/1‑145 (MQ=255) TCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATCGTCCCAAAGGACGATATCCACACGCTCACCACCCAGCTCCCCGGATACGGCCTGGACGCGCGAACCACGCATGCCGATGCAg > 1:249192‑M1/1‑150 (MQ=255) atcaacgccatggcgccggctgaagtcgcggcgatcatcgttgatgaCGAACTGCGCCGGGTTATCGTCCCAAAGGACGATATCCACACGCTCACCACCCAGCTCCCCGGATACGGCCTGGACGCGCGAACCACGCATGCCGATGCAGGc > 2:416167‑M2/48‑150 (MQ=255) ATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATCGTCTCAAAGGACGATATCCACACGCTCACCACCCAGCTCCCCGGATACGGCCTGGACGCGCGAACCACGCATGCCGATGCAGGc < 2:150609‑M1/150‑1 (MQ=255) AACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATCGTCCCAAAGGACGATATCCACACGCTCACCACCCAGCTCCCCGGATACGGCCTGGACGCGCGAACCACGCATGCCGATGCAGGCAcc < 1:1203822‑M1/150‑1 (MQ=255) ccatgtcgccggctgaagtcgcggcgatcatcgttgatgaCGAACTGCGCCGGGTTATCGTCCCAAAGGACGa < 1:642489‑M2/33‑1 (MQ=255) ccatgtcgccggctgaagtcgcggcgatcatcgttgatgaCGAACTGCGCCGGGTTATCGTCCCAAAGGACGa > 2:642489‑M2/41‑73 (MQ=255) ccgcGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATCGTCCCAAAGGACGATATCCACACGCTCACCACCCAGCTCCCCGGATACGGCCTGGACGCGCGAACCACGCATGCCGATGCAGGCACCTTGCGGGTCGa > 1:858508/1‑150 (MQ=255) ccgcGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATCGTCCCAAAGGACGATATCCACACGCTCACCACCCAGCTCCCCGGATACGGCCTGGACGCGCGAACCACGCATGCCGATGCAGGCACCTTGCGGGTCGa < 2:1203822/150‑1 (MQ=255) tCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATCGTCCCAAAGTACGATATCCACACGCTCACCACCCAGCTCCCCGGATACGGCCTGCACGCGCGAACCACGCATGCCGATGCAGGCACCTTGCGGGTCGATACGCTTg < 2:1268570/150‑1 (MQ=255) tCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATCGTCCCAAAGGACGATATCCACACGCTCACCACCCAGCTCCCCGGATACGGCCTGGACGCGCGAACCACGCATGCCGATGCAGGCACCTTGCGGGTCGATACGCTTg < 2:1163006/150‑1 (MQ=255) aGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATCGTCCCAAAGGACGATATCCACACGCTCACCACCCAGCTCCCCGGATACGGCCt < 2:1059866/95‑1 (MQ=255) aGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATCGTCCCAAAGGACGATATCCACACGCTCACCACCCAGCTCCCCGGATACGGCCt > 1:1059866/1‑95 (MQ=255) aGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATCGTCCCAAAGGACGATATCCACACGCTCACCACCCAGCTCCCCGGATACGGCCTGGACGCGCGAACCACGCATGCCGATGCAGGCACCTTGCGGGTCGATACGCTTGTc > 2:620313/1‑150 (MQ=255) cATGGCGTTGATGACGAACTGCGCCGGGTTATCGTCCCAAAGGACGATATCCACACGCTCACCACCCAGCTCCCCGGATACGGCCTGGAcgc > 1:1269936/1‑92 (MQ=255) cATGGCGTTGATGACGAACTGCGCCGGGTTATCGTCCCAAAGGACGATATCCACACGCTCACCACCCAGCTCCCCGGATACGGCCTGGAcgc < 2:1269936/92‑1 (MQ=255) tGGCGTTGATGACGAACTGCGCCGGGTTATCGTCCCAAAGGACGATATCCACACGCTCACCACCCAGCTCCCCGGATACGGCCTGGACGCGCGAACCACGCATGCCGATGCAGGCACCTTGCGGGTCGATACGCTTGTCCTTGGAGCGGa < 1:741455/150‑1 (MQ=255) cgttgatgaCGAACTGCGCCGGGTTATCGTCCCAAAGGACGATATCCACACGCTCACCACCCAGCTCCCCGGATACGGCCTGGACGCGCGAACCACGCATGCCGATGCAGGCACCTTGCGGGTCGATACGCTTGTCCTTGGAGCGGACgg < 1:1104767‑M2/141‑1 (MQ=255) cGAACTGCGCCGGGTTATCGTCCCAAAGGACGATATCCACACGCTCACCACCCAGCTCCCCGGATACGGCCTGGACGCGCGAACCACGCATGCCGATGCAGGCACCTTGCGGGTCGATACGCTTGTCCTTGGAGCGGACGGCAATCTTgg > 1:680199/1‑150 (MQ=255) | GCCGGTCAACTGACTGGCCAGGCGAACGTTCTGACCGCCACGGCCAATGGCCTGGGCCAGGTTGTCCTCGGCGACGGCGATGTCCATGGCATGGGCATCTTCATCAACGATGATCGCCGCGACTTCAGCCGGCGACATGGCGTTGATGACGAACTGCGCCGGGTTATCGTCCCAAAGGACGATATCCACACGCTCACCACCCAGCTCCCCGGATACGGCCTGGACGCGCGAACCACGCATGCCGATGCAGGCACCTTGCGGGTCGATACGCTTGTCCTTGGAGCGGACGGCAATCTTGG > NC_002947/5359313‑5359611 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |