New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5983519	56 (1.070)	3 (0.060)	3/238	NT	4.9%	coding (4108/5049 nt)	PP_5242	GAF domain‑containing sensor histidine kinase
	?	NC_002947	= 5983556	62 (1.220)					coding (4145/5049 nt)	PP_5242	GAF domain‑containing sensor histidine kinase
Rejected: Frequency below/above cutoff threshold.

TTCATGACCCAGGCACCGTTGTCGGTCATCAACACCACCATGCGCACCCGCAAACCGCTGGTGCTCAACGATGCCCTCAGTGAGTGCCCGGAGGCCTTCCGCCAACAGCTGCAGGCGCGCAACGCCCGCTCGGTGCTGTGCCTGCCGCTGGTGATCCAGGGCGTGCTGATCGGCCTGGTGTACCTGGAAAACCGCCTCGTGCCCAACCTGTTCGGCAGTCAGCGCCTGGCCATGCTGGAAATCCTCGCCTCGCAGGCAGCGGTGTCGCTACAAACGGCCAAGTTCTACACG  >  NC_002947/5983411‑5983701                                                                                                                                                  |                                                                                                                                                  ttCATGACCCAGGCACCGTTGTCGGTCATCAACACCACCATGCGCACCCGCAAACCGCTGGTGCTCAACGATGCCCTCAGTGAGTGCCCGGAGGCCTTCCGCCAACAGCTGCAGGCGCGCAACGCCCGCTCGGTGCTGTGCCTGCCgctg                                                                                                                                               >  2:793109‑M2/1‑146 (MQ=255) ttCATGACCCAGGCACCGTTGTCGGTCATCAACACCACCATGCGCACCCGCAAACCGCTGGTGCTCAACGATGCCCTCAGTGAGTGCCCGGAGGCCTTCCGCCAACAGCTGCAGGCGCGCAACGCCCGCTCGGTGCTGTGCCTGCCgctg                                                                                                                                               >  2:565888‑M2/1‑146 (MQ=255) ttCATGACCCAGGCACCGTTGTCGGTCATCAACACCACCATGCGCACCCGCAAACCGCTGGTGCTCAACGATGCCCTCAGTGAGTGCCCGGAGGCCTTCCGCCAACAGCTGCAGGCGCGCAACGCCCGCTCGGTGCTGTGCCTGCCgctg                                                                                                                                               >  2:459517‑M2/1‑146 (MQ=255)               aCCGTTGTCGGTCATCAACACCACCATGCGCACCCGCAAACCGCTGGTGCTCAACGATGCCCTCAGTGAGTGCCCGGAGGCCTTCCGCCAACAGCTGCAGGCGCGCAACGCCCGCTCGGTGCTGTGCCTGCCGCTGGTGATCCAGGGCGt                                                                                                                                 <  2:1425801/150‑1 (MQ=255)               aCCGTTGTCGGTCATCAACACCACCATGCGCACCCGCAAACCGCTGGTGCTCAACGATGCCCTCAGTGAGTGCCCGGAGGCCTTCCGCCAACAGCTGCAGGCGCGCAACGCCCGCTCGGTGCTGTGCCTGCCGCTGGTGATCCAGGGCGt                                                                                                                                 >  2:1288626/1‑150 (MQ=255)                        ggTCATCAACACCACCATGCGCACCCGCAAACCGCTGGTGCTCAACGATGCCCTCAGTGAGTGCCCGGAGGCCTTCCGCCAACAGCTGCAGGCGCGCAACGCCCGCTCGGTGCTGTGCCTGCCGCTgg                                                                                                                                              >  2:181647/1‑128 (MQ=255)                        ggTCATCAACACCACCATGCGCACCCGCAAACCGCTGGTGCTCAACGATGCCCTCAGTGAGTGCCCGGAGGCCTTCCGCCAACAGCTGCAGGCGCGCAACGCCCGCTCGGTGCTGTGCCTGCCGCTgg                                                                                                                                              <  1:181647/128‑1 (MQ=255)                         gTCATCAACACCACCATGCGCACCCGCAAACCGCTGGTGCTCAACGATGCCCTCAGTGAGTGCCCGGAGGCCTTCCGCCAACAGCTGCAGGCGCGCAACGCCCGCTCGGTGCTGTGCCTGCCGCTGGTGATCCAGGGCGTGCTGATCGGc                                                                                                                       <  1:1288626/150‑1 (MQ=255)                              caACACCACCATGCGCACCCGCAAACCGCTGGTGCTCAACGATGCCCTCAGTGAGTGCCCGGAGGCCCTCCGCCAACAGCTGCAGGCGCGCAACGCCCGCTCGGTGCTGTGCCTGCCGCTGGTGATCCAGGGCGTGCTGATCGGCCTGgt                                                                                                                  <  1:1036066/150‑1 (MQ=255)                                acacCACCATGCGCACCCGCAAACCGCTGGTGCTCAACGATGCCCTCAGTGAGTGCCCGGAGGCCTTCCGCCAACAGCTGCAGGCGCGCAACGCCCGCTCGGTGCTGTGCCTGCCGCTGGTGATCCAggg                                                                                                                                    >  2:787718/1‑130 (MQ=255)                                acacCACCATGCGCACCCGCAAACCGCTGGTGCTCAACGATGCCCTCAGTGAGTGCCCGGAGGCCTTCCGCCAACAGCTGCAGGCGCGCAACGCCCGCTCGGTGCTGTGCCTGCCGCTGGTGATCCAggg                                                                                                                                    <  1:787718/130‑1 (MQ=255)                                acacCACCATGCGCACCCGCAAACCGCTGGTGCTCAACGATGCCCTCAGTGAGTGCCCGGAGGCCTTCCGCCAACAGCTGCAGGCGCGCAACGCCCGCTCGGTGCTGTGCCTGCCGCTGGTGATCCAGGGCGTGCTGATCGGCCTGgtgt                                                                                                                >  1:743851/1‑150 (MQ=255)                                    caccaTGCGCACCCGCAAACCGCTGGTGCTCAACGATGCCCTCAGTGAGTGCCCGGAGGCCTTCCGCCAACAGCTGCAGGCGCGCAACGCCCGCTCGGTGCTGTGCCTGCCGCTGGTGATCCAGGGCGTGCTGATCGGCCTGGTGTACCt                                                                                                            >  1:371754/1‑150 (MQ=255)                                      ccaTGCGCACCCGCAAACCGCTGGTGCTCAACGATGCCCTCAGTGAGTGCCCGGAGGCCTTCCGCCAACAGCTGCAGGCGCGCAACGCCCGCTCGGTGCTGTGCCTGCCGCTGGTGATCCAGGGCGTGCTGATCGGCCTGGTGTACCTgg                                                                                                          <  2:1173560/150‑1 (MQ=255)                                       caTGCGCACCCGCAAACCGCTGGTGCTCAACGATGCCCTCAGTGAGTGCCCGGAGGCCTTCCGCCAACAGCTGCAGGCGCGCAACGCCCGCTCGGTGCTGTGCCTGCCGCTGGTGATCCAGGGCGTGCTGATCGGCCTGGTGTACCTGGa                                                                                                         >  1:1344853/1‑150 (MQ=255)                                         tGCGCACCCGCAAACCGCTGGTGCTCAACGATGCCCTCAGTGAGTGCCCGGAGGCCTTCCGCCAACAGCTGCAGTCGTGCAACGCCCGCTCGGTGCTGTGCCTGCCGCTGGTGATCCAGGGCGTGCTGATCGGCCTGGTGTACCTGGaaa                                                                                                       >  1:674462/1‑150 (MQ=255)                                           cgcACCCGCAAACCGCTGGTGCTCAACGATGCCCTCAGTGAGTGCCCGGAGGCCTTCCGCCAACAGCTGCAGGCGCGCAACGCCCGCTCGGTGCTGTGCCTGCCGCTGGTGATCCAGGGCGTGCTGATCGGCCTGGTGTACCTGGAAAAc                                                                                                     <  2:248882/150‑1 (MQ=255)                                            gcACCCGCAAACCGCTGGTGCTCAACGATGCCCTCAGTGAGTGCCCGGAGGCCTTCCGCCAACAGCTGCAGGCGCGCAACGCCCGCTCGGTGCTGTGCCTGCCGCTGGTGATCCAGGGCGTGCTGATCGGCCTGGTGTACCTGGAAAAcc                                                                                                    >  2:1419763/1‑150 (MQ=255)                                                ccGCAAACCGCTGGTGCTCAACGATGCCCTCAGTGAGTGCCCGGAGGCCTTCCGCCAACAGCTGCAGGCGCGCAACGCCCGCTCGGTGCTGTGCCTGCCGCTGGTGATCCAGGGCGTGCTGATCGGCCTGGTGTACCTg                                                                                                           >  1:476729/1‑139 (MQ=255)                                                ccGCAAACCGCTGGTGCTCAACGATGCCCTCAGTGAGTGCCCGGAGGCCTTCCGCCAACAGCTGCAGGCGCGCAACGCCCGCTCGGTGCTGTGCCTGCCGCTGGTGATCCAGGGCGTGCTGATCGGCCTGGTGTACCTg                                                                                                           <  2:476729/139‑1 (MQ=255)                                                ccGCAAACCGCTGGTGCTCAACGATGCCCTCAGTGAGTGCCCGGAGGCCTTCCGCCAACAGCTGCAGGCGCGCAACGCCCGCTCGGTGCTGTGCCTGCCGCTGGTGATCCAGGGCGTGCTGATCGGCCTGGTGTACCTGGAAAACCGcc                                                                                                 >  1:34858/1‑149 (MQ=255)                                                ccGCAAACCGCTGGTGCTCAACGATGCCCTCAGTGAGTGCCCGGAGGCCTTCCGCCAACAGCTGCAGGCGCGCAACGCCCGCTCGGTGCTGTGCCTGCCGCTGGTGATCCAGGGCGTGCTGATCGGCCTGGTGTACCTGGAAAACCGcc                                                                                                 <  2:34858/149‑1 (MQ=255)                                                ccGCAAACCGCTGGTGCTCAACGATGCCCTCAGTGAGTGCCCGGAGGCCTTCCGCCAACAGCTGCAGGCGCGCAACGCCCGCTCGGTGCTGTGCCTGCCGCTGGTGATCCAGGGCGTGCTGATCGGCCTGGTGTACCTGGAAAACCGCCt                                                                                                >  1:1130443/1‑150 (MQ=255)                                                  gCAAACCGCTGGTGCTCAACGATGCCCTCAGTGAGTGCCCGGAGGCCTTCCGCCAACAGCTGCAGGCGCGCAACGCCCGCTCGGTGCTGTGCCTGCCGCTGGTGATc                                                                                                                                         >  1:387884/1‑107 (MQ=255)                                                  gCAAACCGCTGGTGCTCAACGATGCCCTCAGTGAGTGCCCGGAGGCCTTCCGCCAACAGCTGCAGGCGCGCAACGCCCGCTCGGTGCTGTGCCTGCCGCTGGTGATc                                                                                                                                         <  2:387884/107‑1 (MQ=255)                                                          cTGGTGCTCAACGATGCCCTCAGTGAGTGCCCGGAGGCCTTCCGCCAACAGCTGCAGGCGCGCAACGCCCGCTCGGTGCTGTGCCTGCCGCTGGTGATCCAGGGCGTGCTGATCGGCCTGGTGTACCTGGAAAACCGCCTCGTGCCCAAc                                                                                      <  2:320278/150‑1 (MQ=255)                                                             gTGCTCAACGATGCCCTCAGTGAGTGCCCGGAGGCCTTCCGCCAACAGCTGTAGGCGCGCAACGCCCGCTCGGTGCTGTGCCTGCCGCTGGTGATCCAGGGCGTGCTGATCGGCCTGGTGTACCTGGAAAACCGCCTCGTGCCCCACCTg                                                                                   >  1:477510/1‑150 (MQ=255)                                                               gCTCAACGATGCCCTCAGTGAGTGCCCGGAGGCCTTCCGCCAACAGCTGCAGGCGCGCAACGCCCGCTCGGTGCTGTGCCTGCCGCTGGTGATCCAGGGCGTGCTGATCGGCCTGGTGTACCTGGAAAACCg                                                                                                   <  1:1103929/132‑1 (MQ=255)                                                               gCTCAACGATGCCCTCAGTGAGTGCCCGGAGGCCTTCCGCCAACAGCTGCAGGCGCGCAACGCCCGCTCGGTGCTGTGCCTGCCGCTGGTGATCCAGGGCGTGCTGATCGGCCTGGTGTACCTGGAAAACCg                                                                                                   >  2:1103929/1‑132 (MQ=255)                                                                  cAACGATGCCCTCAGTGAGTGCCCGGAGGCCTTCCGCCAACAGCTGCAGGCGCGCAACGCCCGCTCGGTGCTGTGCCTGCCGCTGGTGATCCAGGGCGTGCTGATCGGCCTGGTGTACCTGGAAAACCGCCTCGTGCCCAACCTGTTCgg                                                                              <  2:282215/150‑1 (MQ=255)                                                                   aaCGATGCCCTCAGTGAGTGCCCGGAGGCCTTCCGCCAACAGCTGCAGGCGCGCAACGCCCGCTCGGTGCTGTGCCTGCCGCTGGTGATCCAGGGCGTGCTGATCGGCCTGGTGTACCTGGAAAACCGCCTCGTGCCCAACCTGTTCGGc                                                                             >  2:911154/1‑150 (MQ=255)                                                                    aCGATGCCCTCAGTGAGTGCCCGGAGGCCTTCCGCCAACAGCTGCAGGCGCGCAACGCCCGCTCGGTGCTGTGCCTGCCGCTGGTGATCCAGGGCGTGCTGATCGGCCTGGTGTACCTGGAAAACCGCCTCGTGCCCAACCTGTTCGGCa                                                                            <  1:1419763/150‑1 (MQ=255)                                                                    aCGATGCCCTCAGTGAGTGCCCGGAGGCCTTCCGCCAACAGCTGCAGGCGCGCAACGCCCGCTCGGTGCTGTGCCTGCCGCTGGTGATCCAGGGCGTGCTGATCGGCCTGGTGTACCTGGAAAACCGCCTCGTGCCCAACCTGTTCGGCa                                                                            <  2:937403/150‑1 (MQ=255)                                                                            cTCAGTGAGTGCCCGGAGGCCTTCCGCCAACAGCTGCAGGCGCGCAACGCCCGCTCGGTGCTGTGCCTGCCGCTGGTGATCCAGGGCGTGCTGATCGGCCTGGTGTACCTg                                                                                                           <  1:965359/111‑1 (MQ=255)                                                                            cTCAGTGAGTGCCCGGAGGCCTTCCGCCAACAGCTGCAGGCGCGCAACGCCCGCTCGGTGCTGTGCCTGCCGCTGGTGATCCAGGGCGTGCTGATCGGCCTGGTGTACCTg                                                                                                           >  2:965359/1‑111 (MQ=255)                                                                            cTCAGTGAGTGCCCGGAGGCCTTCCGCCAACAGCTGCAGGCGCGCAACGCCCGCTCGGTGCTGTGCCTGCCGCTGGTGATCCAGGGCGTGCTGATCGGCCTGGTGTACCTGGAAAACCGCCTCGTGCGCAACGCGTTCGGCAGTCAgcgc                                                                    >  2:125239/1‑150 (MQ=255)                                                                               agtgagtgCCCGGAGGCCTTCCGCCAACAGCTGCAGGCGCGCAACGCCCGCTCGGTGCTGTGCCTGCCGCTGGTGATCCAGGGCGTGCTGATCGGCCTGGTGTACCTGGAAAACCGCCTCGTGCCCAACCTGTTCGGCAGTCAGCGCCTg                                                                 >  2:21205/1‑150 (MQ=255)                                                                                 tgagtgCCCGGAGGCCTTCCGCCAACAGCTGCAGGCGCGCAACGCCCGCTCGGTGCTGTGCCTGCCGCTGGTGATCCAgg                                                                                                                                     >  1:371123/1‑80 (MQ=255)                                                                                 tgagtgCCCGGAGGCCTTCCGCCAACAGCTGCAGGCGCGCAACGCCCGCTCGGTGCTGTGCCTGCCGCTGGTGATCCAgg                                                                                                                                     <  2:371123/80‑1 (MQ=255)                                                                                    gtgCCCGGAGTGCTTCCGCCAACAGCTGCAGGCGCGCAACGCCCGCTCGGTGCTGTGCCTGCCGCTGGTGATCCAGGGCTTGCGGATCGGCCTGGTGTACGTGGAAAACCGCCTCGTGCCCAACCTGTTCGGCAGTCAGCGCCTGGCCAt                                                            >  2:920727/1‑150 (MQ=255)                                                                                        ccGGAGGCCTTCCGCCAACAGCTGCAGGCGCGCAACGCCCGCTCGGTGCTGTGCCTGCCGCTGGTGATCCAGGGCGTGCTGATCGGCCTGGTGTACCTGGAAAACCGCCTCGTGCCCAACCTGTTCGGCAGTCAGCGCCTGGCCATGCTg                                                        >  2:919257/1‑150 (MQ=255)                                                                                         cGGAGGCCTTCCGCCAACAGCTGCAGGCGCGCAACGCCCGCTCGGTGCTGTGCCTGCCGCTGGTGATCCAGGGCGTGCTGATCGGCCTGGTGTACCTGGAAAACCGCCTCGTGCCCAACCTGTTCGGCAGTCAGCGCCTGGCCATGCTgg                                                       <  2:705975/150‑1 (MQ=255)                                                                                         cGGAGGCCTTCCGCCAACAGCTGCAGGCGCGCAACGCCCGCTCGGTGCTGTGCCTGCCGCTGGTGATCCAGGGCGTGCTGATCGGACTGGGTTACCTGTAAAACCGCCTCGTGCCCAACCTGTTCGGCAGTCAGCGCCTGGCCATGCTgg                                                       <  2:904403/150‑1 (MQ=255)                                                                                            aGGCCTTCCGCCAACAGCTGCAGGCGCGCAACGCCCGCTCGGTGCTGTGCCTGCCGCTGGTGATCCAGGGCGTGCTGATCGGCCTGGTGTACCTGGAAAACCGCCTCGTGCCCAACCTGTTCGGCAGTCAGCGCCTGGCCATGCTGGaaa                                                    <  2:947827/150‑1 (MQ=255)                                                                                                cTTCCGCCAACAGCTGCAGGCGCGCAACGCCCGCTCGGTGCTGTGCCTGCCGCTGGTGATCCAGGGCGTGCTGATCGGCCTGGTGTACCTGGAAAACCGCCTCGTGCCCAACCTGTTCGGCAGTCAGCGCCTGGCCATGCTGGAAACcct                                                >  1:596848/1‑150 (MQ=255)                                                                                                 ttCCGCCAACAGCTGCAGGCGCGCAACGCCCGCTCGGTGCTGTGCCTGCCGCTGGTGATCCAGGGCGTGCTGATCGGCCTGGTGTACCTGGAAAACCGCCTCGTGCCCAACCTGTTCGGCAGTCAGCGCCTGGCCATGCTGGAAATcctc                                               >  1:642306/1‑150 (MQ=255)                                                                                                 ttCCGCCAACAGCTGCAGGCGCGCAACGCCCGCTCGGTGCTGTGCCTGCCGCTGGTGATCCAGGGCGTGCTGATCGGCCTGGTGTACCTGGAAAACCGCCTCGTGCCCAACCTGTTCGGCAGTCAGCGCCTGGCCATGCTGGAAATcctc                                               >  1:8928/1‑150 (MQ=255)                                                                                                 ttCCGCCAACAGCTGCAGGCGCGCAACGCCCGCTCGGTGCTGTGCCTGCCGCTGGTGATCCAGGGCGTGCTGATCGGCCTGGTGTACCTGGAAAACCGCCTCGTGCCCAACCTGTTCGGCAGTCAGCGCCTGGCCATGATGGAAATcctc                                               >  1:63892/1‑150 (MQ=255)                                                                                                   ccGCCAACAGCTGCAGGCGCGCAACGCCCGCTCGGTGCTGTGCCTGCCGCTGGTGATCCAGGGCGTGCTGATCGGCCTGGTGTACCTGGAAAACCGCCTCGTGCCCAACCTGTTCGGCAGTCAGCGCCTGGCCATGCTGGAAATcctcgc                                             <  2:517227/150‑1 (MQ=255)                                                                                                      ccAACAGCTGCAGGCGCGCAACGCCCGCTCGGTGCTGTGCCTGCCGCTGGTGATCCAGGGCGTGCTGATCGGCCTGGTGTACCTGGAAAACCGCCTCGTGCCCAACCTGTTCGGCAGTCAGCGCCTGGCCATGCTGGAAATcctcgcctc                                          <  2:8928/150‑1 (MQ=255)                                                                                                       cAACAGCTGCAGGCGCGCAACGCCCGCTCGGTGCTGTGCCTGCCGCTGGTGAGCCAGGGCGTGCTGATCGGCCTGGTGTACCTGGAAAACCGCCTCGTGCCCAACCTGTTCGGCAGTCAGCGCCTGGCCATGCTGGAAATcctcgcctcg                                         >  2:1268638/1‑150 (MQ=255)                                                                                                        aaCAGCTGCAGGCGCGCAACGCCCGCTCGGTGCTGTGCCTGCCgctgttggcggaaggcctccgggcactcactgagggcatcgttgagcaccagcggtttgcgggtgcgcatggtggtgttgatgaccgacaacggtgcctgggtcatg                                        <  2:951750‑M2/150‑108 (MQ=255)                                                                                                         aCAGCTGTAGGCGCGCAACGCCCGCTCGGTGCTGTGCCTGCCGCTGGTGATCCAGGGCGTGCTGATCGGCCTGGTGTACCTGGAAAACCGCCTCGTGCCCAACCTGTTCGGCAGTCAGCGCCTGGCCATGCTGGAAATCCTCGCCTCgca                                       <  2:477510/150‑1 (MQ=255)                                                                                                         aCAGCTGCAGGCGCGCAACGCCCGCTCGGTGCTGTGCCTGCCGCTGGTGATCCAGGGCGTGCTGATCGGCCTGGTGTACCTGGAAAACCGCCTCGTGCCCAACCTGTTCGGCAGTCAGCGCCTGGCCATGCTGGAAATcc                                                 >  2:1263543/1‑140 (MQ=255)                                                                                                         aCAGCTGCAGGCGCGCAACGCCCGCTCGGTGCTGTGCCTGCCGCTGGTGATCCAGGGCGTGCTGATCGGCCTGGTGTACCTGGAAAACCGCCTCGTGCCCAACCTGTTCGGCAGTCAGCGCCTGGCCATGCTGGAAATcc                                                 <  1:1263543/140‑1 (MQ=255)                                                                                                             cTGCAGGCGCGCAACGCCCGCTCGGTGCTGTGCCTGCCgctgttggcggaaggcctccgggcactcactgagg                                                                                                                >  2:515230‑M2/1‑38 (MQ=255)                                                                                                             cTGCAGGCGCGCAACGCCCGCTCGGTGCTGTGCCTGCCgctgttggcggaaggcctccgggcactcactgagg                                                                                                                <  1:515230‑M2/73‑36 (MQ=255)                                                                                                                  ggCGCGCAACGCCCGCTCGGTGCTGTGCCTGCCGCTGGTGATCCAGGGCGTGCTGATCGGCCTGGTGTACCTGGAAAACCGCCTCGTGCCCAACCTGTTCGGCAGTCAGCGCCTGGCCATGCTGGAAATCCTCGCCTCGCAGGCAGCGgt                              <  1:911154/150‑1 (MQ=255)                                                                                                                  ggCGCGCAACGCCCGCGCGGTGCTGTGCCTGCCGCTGGTGATCCAGGGCGTGCTGATCGGCCTGGTGTACCTGGAAAACCGCCTCGTGCCCAACCTGTTCGGCAGTCAGCGCCTGGCCATGCTGGAAATCCTCGCCTCGCAGGCAGCGgt                              <  1:21205/150‑1 (MQ=255)                                                                                                                               cGCTCGGTGCTGTGCCTGCCGCTGGTGATCCAGGGCGTGCTGATCGGCCTGGTGTACCTGGAAAACCGCCTCGTGCCCAACCTGTTCGGCAGTCAGCGCCTGGCCATGCTGGAAATCCTCGCCTCGCAGGCAGCGGTGTCGCTACAAACg                 >  2:850001/1‑150 (MQ=255)                                                                                                                                gCTCGGTGCTGTGCCTGCCGCTGGTGATCCAGGGCGTGCTGATCGGCCTGGTGTACCTGGAAAACCGCCTCGTGCCCAACCTGTTCGGCAGTCAGCGCCTGGCCATGCTGGAAATCCTCGCCTCGCAGGCAGCGGTGTCGCTACAAACgg                <  2:371754/150‑1 (MQ=255)                                                                                                                                  tCGGTGCTGTGCCTGCCGCTGGTGATCCAGGGCGTGCTGATCGGCCTGGTGTACCTGGAAAACCGCCTCGTGCCCAACCTGTTCGGCAGTCAGCGCCTGGCCATGCTGGAAATCCTCGCCTCGCAGGCAGCGGTGTCGCTACAAACGGcc              >  1:904816/1‑150 (MQ=255)                                                                                                                                    ggTGCTGTGCCTGCCGCTGGTGATCCAGGGCGTGCTGATCGGCCTGGTGTACCTGGAAAACCGCCTCGTGCCCAACCTGTTCGGCAGTCAGAGCCTGGCCATGCTGGAAATCCTCGCCTCGCAGGCAGCGGTGTCGCTACAAACGGCCaa            >  1:375554/1‑150 (MQ=255)                                                                                                                                     gTGCTGTGCCTGCCGCTGGTGATCCAGGGCGTGCTGATCGGCCTGGTGTACCTGGAAAACCGCCTCGTGCCCAACCTGTTCGGCAGTCAGCGCCTGGCCATGCTGGaa                                                     >  1:963972/1‑108 (MQ=255)                                                                                                                                     gTGCTGTGCCTGCCGCTGGTGATCCAGGGCGTGCTGATCGGCCTGGTGTACCTGGAAAACCGCCTCGTGCCCAACCTGTTCGGCAGTCAGCGCCTGGCCATGCTGGaa                                                     <  2:963972/108‑1 (MQ=255)                                                                                                                                     gTGCTGTGCCTGCCGCTGGTGATCCAGGGCGTGCTGATCGGCCTGGTGTACCTGGAAAACCGCCTCGTGCCCAACCTGTTCGGCAGTCAGCGCCTGGCCATGCTGGAAATCCTCGCCTCGCAGGCAGCGGTGTCGCTACAAACGGCCaa            >  2:527214/1‑149 (MQ=255)                                                                                                                                     gTGCTGTGCCTGCCGCTGGTGATCCAGGGCGTGCTGATCGGCCTGGTGTACCTGGAAAACCGCCTCGTGCCCAACCTGTTCGGCAGTCAGCGCCTGGCCATGCTGGAAATCCTCGCCTCGCAGGCAGCGGTGTCGCTACAAACGGCCaa            <  1:527214/149‑1 (MQ=255)                                                                                                                                           tgcctgccGCTGGTGATCCAGGGCGTGCTGATCGGCCTGGTGTACCTGGAAAACCGCCTCGTGCCCAACCTGTTCGGCAGTCAgc                                                                      <  1:256468/85‑1 (MQ=255)                                                                                                                                           tgcctgccGCTGGTGATCCAGGGCGTGCTGATCGGCCTGGTGTACCTGGAAAACCGCCTCGTGCCCAACCTGTTCGGCAGTCAgc                                                                      >  2:256468/1‑85 (MQ=255)                                                                                                                                           tgcctgccGCTGGTGATCCAGGGCGTGCTGATCGGCCTGGTGTACCTGGAAAACCGCCTCGTGCCCAACCTGTTCGGCAGTCAGCGCCTGGCCATGCTGGAAATCCTCGCCTCGCAGGCAGCGGTGTCGCTACAAACGGCCAAGTTCTac     <  2:904816/150‑1 (MQ=255)                                                                                                                                              ctgccGCTGGTGATCCAGGGCGTGCTGGTCGGCCTGGTGTACCTGGAAAACCGCCTCGTGCCCAACCTGTTCGGCAGTCAGCGCCTGGCCATGCTGGAAATCCTCGCCTCGCAGGCAGCGGTGTCGCTACAAACGTCCAAGTTCTACAcg  >  2:247632/1‑150 (MQ=255)                                                                                                                                                  |                                                                                                                                                  TTCATGACCCAGGCACCGTTGTCGGTCATCAACACCACCATGCGCACCCGCAAACCGCTGGTGCTCAACGATGCCCTCAGTGAGTGCCCGGAGGCCTTCCGCCAACAGCTGCAGGCGCGCAACGCCCGCTCGGTGCTGTGCCTGCCGCTGGTGATCCAGGGCGTGCTGATCGGCCTGGTGTACCTGGAAAACCGCCTCGTGCCCAACCTGTTCGGCAGTCAGCGCCTGGCCATGCTGGAAATCCTCGCCTCGCAGGCAGCGGTGTCGCTACAAACGGCCAAGTTCTACACG  >  NC_002947/5983411‑5983701

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.