| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 25750 | 22 (0.690) | 6 (0.210) | 6/228 | NT | 22.5% | intergenic (+180/‑131) | PP_0020/PP_0021 | hypothetical protein/hypothetical protein |
| ? | NC_002947 | = 25768 | 21 (0.720) | intergenic (+198/‑113) | PP_0020/PP_0021 | hypothetical protein/hypothetical protein | |||||
ACCAATTGATTTTCTCCGGAGCCGGTGTCACTGTCGCTCCAAGAATAGCCCCCACGCCTCGGGCAGGTCCCAGACCTGTACTGCGCACCAGGGGGTTAGTTGTTTCTAGGGCCCGCCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/25632‑25750‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcccgcccaAAGCATGCCTGATCGACCTGGGCGGGCCCTAGAAACAACTAACCCCCTGGTGCGCAGTACAGGTCTGGGACCTGCCCGAGGCGTGG < NC_002947/25768‑25683 ACCAATTGATTTTCTCCGGAGCCGGTGTCACTGTCGCTCCAAGAATAGCCCCCACGCCTCGGGCAGGTCCCAGACCTGTACTGCGCACCAGGGGGTTAGTTGTTTCTAGGGCCCGCCCAAAGCATGCCTGATCGACCTGGGCGG > 1:72255/1‑144ACCAATTGATTTTCTCCGGAGCCGGTGTCACTGTCGCTCCAAGAATAGCCCCCACGCCTCGGGCAGGTCCCAGACCTGTACTGCGCACCAGGGGGTTAGTTGTTTCTAGGGCCCGCCCAAAGCATGCCTGATCGACCTGGGCGG < 2:72255/144‑1 CCACGCCTCGGGCAGGTCCCAGACCTGTACTGCGCACCAGGGGGTTAGTTGTTTCTAGGGCCCGCCCAAAGCATGCCTGATCGACCTGGGCGGGCCCTAGAAACAACTAACCC < 1:711888/113‑1 CCACGCCTCGGGCAGGTCCCAGACCTGTACTGCGCACCAGGGGGTTAGTTGTTTCTAGGGCCCGCCCAAAGCATGCCTGATCGACCTGGGCGGGCCCTAGAAACAACTAACCC > 2:711888/1‑113 GGGGTTAGTTGTTTCTAGGGCCCGCCCAAAGCATGCCTGATCGACCTGGGCGGGCCCTAGAAACAACTAACCCCCT > 1:26189/1‑76 GGGGTTAGTTGTTTCTAGGGCCCGCCCAAAGCATGCCTGATCGACCTGGGCGGGCCCTAGAAACAACTAACCCCCT < 2:26189/76‑1 CGCCCAAAGCATGCCTGATCGACCTGGGCGGGCCCTAGAAACAACTAACCCCCTGGTGCGCAGTACAGGTCTGGGACCTGCCCGAGGCGTGG > 1:302808/1‑92 CGCCCAAAGCATGCCTGATCGACCTGGGCGGGCCCTAGAAACAACTAACCCCCTGGTGCGCAGTACAGGTCTGGGACCTGCCCGAGGCGTGG < 2:302808/92‑1 ACCAATTGATTTTCTCCGGAGCCGGTGTCACTGTCGCTCCAAGAATAGCCCCCACGCCTCGGGCAGGTCCCAGACCTGTACTGCGCACCAGGGGGTTAGTTGTTTCTAGGGCCCGCCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/25632‑25750‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcccgcccaAAGCATGCCTGATCGACCTGGGCGGGCCCTAGAAACAACTAACCCCCTGGTGCGCAGTACAGGTCTGGGACCTGCCCGAGGCGTGG < NC_002947/25768‑25683 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |