New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	147818 =	33 (1.040)	3 (0.100)	3/236	NT	9.6%	coding (272/636 nt)	PP_0139	lipoprotein
	?	NC_002947	147865 =	25 (0.830)					coding (225/636 nt)	PP_0139	lipoprotein

AGCCGCACAGCGCCGCCGCTGGACTGGTCATTGCGCCTGAACAAGCCGCTGGCCAGTGAAGTGTTGGCCGGGCCAAGGATTGCCGTGGTTCCCCAGGGCAATGTGGTGAGCAGCTACAAGGGCGCGCGCTGGAGCGATGCGGCCCCGGTGCTGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/147972‑147818 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgctCACCACATTGCCCTGGGGAACCACGGCAATCCTTGGCCCGGCCAACACTTCACTGGCCAGCGGCTTGTTCAGGCGCAATGACCAGTCCAGCGGCGGCGCTGTGCGG  >  NC_002947/147865‑147970                                                                                                                                                                                                                                                                       AGCCGCACAGCGCCGCCGCTGGACTGGTCATTGCGCCTGAACAAGCCGCTGGCCAGTGAAGTGTTGGCCGGGCCAAGGATTGCCGTGGTTCCCCAGGGCAATGTGGTGAGCAGCTACAAGGGCGCGCGCTGGAGCGATGCGGCCCCGGTG                                                                                                                 <  1:371139/150‑1   CCGCACAGCGCCGCCGCTGGACTGGTCATTGCGCCTGAACAAGCCGCTGGCCAGTGAAGTGTTGGCCGGGCCAAGGATTGCCGTGGTTCCCCAGGGCAATGTGATGAACAGCTACAAGGGCGCGCGCTGGAGCGATGCGGCCCGGGAGCT                                                                                                               >  1:396888/1‑150    CGCACAGCGCCGCCGCTGGACTGGTCATTGCGCCTGAACAAGCCGCTGGCCAGTGAAGTGTTGGCCGGGCCAAGGATTGCCGTGGTTCCCCAGGGCAATGTGGTGAGCAGCTACAAGGGCGCGCGCTGGAGCGATGCGGCCCCGGTGCTG                                                                                                              >  2:90989/1‑150     GCACAGCGCCGCCGCTGGACTGGTCATTGCGCCTGAACAAGCCGCTGGCCAGTGAAGTGTTGGCCGGGCCAAGGATTGCCGTGGTTCCCCAGGGCAATGTGGTGAGCAGCTACAAGGGCGCGCGCTGGAGCGATGCGGCCCCGGTGCTGC                                                                                                             >  2:389491/1‑150     GCACAGCGCCGCCGCTGGACTGGTCATTGCGCCTGAACAAGCCGCTGGCCAGTGAAGTGTTGGCCGGGCCAAGGATTGCCGTGGTTCCCCAGGGCAATGTGGTGAGCAGCTACAAGGGCGCGCGCTGGAGCGATGCGGCCCCGGTGCTGC                                                                                                             >  2:403781/1‑150      CACAGCGCCGCCGCTGGACTGGTCATTGCGCCTGAACAAGCCGCTGGCCAGTGAAGTGTTGGCCGGGCCAAGGATTGCCGTGGTTCCCCAGGGCAATGTGGTGAGCAGCTACAAGGGCGCGCGCTGGAGCGATGCGGCCCCGGTGCTGCT                                                                                                            <  1:403781/150‑1                                                                                                              GCAGCTACAAGGGCGCGCGCTGGAGCGATGCGGCCCCGGTGCTGCTCACCACATTGCCCTGGGGAACCAC                                                                                    >  1:422492/1‑70                                                                                                              GCAGCTACAAGGGCGCGCGCTGGAGCGATGCGGCCCCGGTGCTGCTCACCACATTGCCCTGGGGAACCAC                                                                                    <  2:422492/70‑1                                                                                                                AGCTACAAGGGCGCGCGCTGGAGCGATGCGGCCCCGGTGCTGCTCACCACATTGCCCTGGGGAACCACGGCAATCCTTGGCCCGGCCAACACTTCACTGGCCAGCGGCTTGTTCAGGCGCAATGACCAGTCCAGCGGCGGCGCTGTGCGG  >  1:820708/1‑150                                                                                                                                                                                                                                                                       AGCCGCACAGCGCCGCCGCTGGACTGGTCATTGCGCCTGAACAAGCCGCTGGCCAGTGAAGTGTTGGCCGGGCCAAGGATTGCCGTGGTTCCCCAGGGCAATGTGGTGAGCAGCTACAAGGGCGCGCGCTGGAGCGATGCGGCCCCGGTGCTGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/147972‑147818 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgctCACCACATTGCCCTGGGGAACCACGGCAATCCTTGGCCCGGCCAACACTTCACTGGCCAGCGGCTTGTTCAGGCGCAATGACCAGTCCAGCGGCGGCGCTGTGCGG  >  NC_002947/147865‑147970

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.