New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	147818 =	33 (1.040)	3 (0.100)	3/236	NT	9.6%	coding (272/636 nt)	PP_0139	lipoprotein
	?	NC_002947	147865 =	25 (0.830)					coding (225/636 nt)	PP_0139	lipoprotein

ACCTCCACTGCCCCATCCGTGCGGTATTCACTCTGAAAGGCCTGCAGCTCGCCGGCCAGTTCGTAGTCTGCCTGCAGGTTACTGTCGTCAGCGCTCAGGCGCTGTACCTGGCCCTCACGCTGGAACCCGTCGAGCAAGCGGTTACGCAGCAGCACCGGGGCCGCATCGCTCCAGCGCGCGCCCTTGTAGCTGCTCACCACATTGCCCTGGGGAACCACGGCAATCCTTGGCCCGGCCAACACTTCACTGGCCAGCGGCTTGTTCAGGCGCAATGACCAGTCCAGCGGCGGCGCTGTG  >  NC_002947/147671‑147967                                                                                                                                                    |                                                                                                                                                      accTCCACTGCCCCATCCGTGCGGTATTCACTCTGAAAGGCCTGCAGCTCGCCGGCCAGTTCGTAGTCTGCCTGCAGGTTACTGTCGTCAGCGCTCAGGCGCTGTACCTGGCCCTCACGCTGGAACCCGTCGAGCAAGCGGTTACgcagc                                                                                                                                                     >  2:48961/1‑150 (MQ=255)            cccATCCGTGCGGTACTCACTCTGAAAGGCCTGCAGCTCGCCGGCCAGTTCGTAGTCTGCCTGCAGGTTACTGTCGTCAGCGCTCAGGCGCTGTACCTGGCCCTCACGCTGGAACCCGTCGAGCAAGCGGTTACGCAGCAGCACCGGGGc                                                                                                                                          >  2:182947/1‑150 (MQ=255)                    tGCGGTATTCACTCTGAAAGGCCTGCAGCTCGCCGGCCAGTTCGTAGTCTGCCTGCAGGTTACTGTCGTCAGCGCTCAGGCGCTGTACCTGGCCCTCACGCTGGAACCCGTCGAGCAAGCGGTTACGCAGCAGCACCGGGGCCGCATCGc                                                                                                                                  <  1:806464/150‑1 (MQ=255)                                tctGAAAGGCCTGCAGCTCGCCGGCCAGTTCGTAGTCTGCCTGCAGGTTACTGTCGTCAGCGCTCAGGCGCTGTACCTGGCCCTCACGCTGGAACCCGTCGAGCAAGCGGTTACGCAGCAGCACCGGGGCAGCATCGCTCCAgcgcgcgc                                                                                                                      >  2:563833/1‑150 (MQ=255)                                   gAAAGGCCTGCAGCTCGCCGGCCAGTTCGTAGTCTGCCTGCAGGTTACTGTCGTCAGCGCTCAGGCGCTGTACCTGGCCCTCACGCTGGAACCCGTCGAGCAAGCGGTTACGCAGCAGCACCGGGGCCGCATCGCTCCAGCGCGCGCCCt                                                                                                                   >  1:36139/1‑150 (MQ=255)                                    aaaGGCCTGCAGCTCGGGGGCCAGGTCGTAATCTGCCTGCAGGTTACTGTCGTTAGCGCTCAGGCGCTGTACCTGGCCCTCACGCTGGAACCCGTCGAGCAAGCGGTTACGCAGCAGCACCGGGGCCGCATCGCTCCAGCGCGCGCCCtt                                                                                                                  <  2:64563/150‑1 (MQ=255)                                    aaaGGCCTGCAGCTCGCCGGCCCGTTCGTAGTCTGCCTGCAGGTTACTGTCGTCAGCGCTCAGGCGCTGTACCTGGCCCTCACGCTGGAACCCCTGGAGATAGGACGCGCGCAGCAGCACCGGGGCCGCATCGCTCCAGCGCGCGCCCtt                                                                                                                  >  2:240307/1‑150 (MQ=255)                                      aGGCCTGCAGCTCGCCGGCCAGTTCGTAGTCTGCCTGCAGGTTACTGTCGTCAGCGCTCAGGCGCTGTACCTGGCCCTCACGCTGGAACCCGTCGAGCAAGCGGTTACGCAGCAGCACCGGGGCCGCATCGCTCCAGCGCGCGCCCTTGt                                                                                                                >  2:15775/1‑150 (MQ=255)                                        gCCTGCAGCTCGCCGGCCAGTTCGTAGTCTGCCTGCAGGTTACTGTCGTCAGCGCTCAGGCGCTGTACCTGGCCCTCACGCTGGAACCCGTCGAGCAAGCGGTTACGCAGCAGCACCGGGGCCGCATCGCTCCAGCGCGCGCCCTTGTAg                                                                                                              <  1:48961/150‑1 (MQ=255)                                        gCCTGCAGCTCGCCGGCCAGTTCGTAGTCTGACTGCAGGTTACTGTCGTCAGCGCTCAGGCGCTGTACCTGGCCCTCACGCTGGAACCCGTCGAGCAAGCGGTTACGCAGCAGCACCGGTGCGCGATCGCTCCAGCGCGCGCCCTTGTAg                                                                                                              <  1:240307/150‑1 (MQ=255)                                          ccgcacagcgccgccgctggactggtcattgcgcctgaacaagccgctggccagtgaagtgttggccgggccaaggattgccgtggttccccagggcaatgtggtgAGCAGCACCGGGGCCGCATCGCTCCAGCGCGCGCCCTTGTAgct                                                                                                            >  1:820708‑M1/107‑150 (MQ=255)                                          cTGCAGCTCGCCGGCCAGTTCGTAGTCTGCCTGCAGGTTACTGTCGTCAGCGCTCAGGCGCTGTACCTGGCCCTCACGCTGGAACCCGTCGAGCAAGCGGTTACGCAGCAGCACCGGGGCCGCATCGCTCCAGCGCGCGCCCTTGTAgct                                                                                                            >  1:555111/1‑150 (MQ=255)                                          cTGCAGCTCGCCGGCCAGTTCGTAGTCTGCCTGCAGGTTACTGTCGTCAGCGCTCAGGCGCTGTACCTGGCCCCCACGCTGGAACCCGTCGAGCAAGCGGTTACGCAGCAGCACCGGGGCCGCATCGCTCCAGCGCGCGCCCTTGTAgct                                                                                                            >  2:146730/1‑150 (MQ=255)                                                     cGGCCAGTTCGTAGTCTGCCTGCAGGTTACTGTCGTCAGCGCTCAGGCGCTGTACCTGGCCCTCACGCTGGAACCCGTCGAGCAAGCGGTTACGCAGCAGCACCGGGGCCGCATCGCTCCAGCGCGCGCCCTTGTAGCTGCTCACCACAt                                                                                                 >  1:285485/1‑150 (MQ=255)                                                            ttCGTAGTCTGCCTGCAGGTTACTGTCGTTCGCGCTCAGGTGCTGTACCTGGCCCTCACGCTGGAACCCGTCGAGCAAGCGGTTACGCAGCAGCACCGGGGCCGCATCGCTCCAGCGCGCGCCCTTGTAGCTGCTCACCACATTGCCCTg                                                                                          <  2:285485/150‑1 (MQ=255)                                                             tCGTAGTCTGCCTGCAGGTTACTGTCGTCAGCGCTCAGGCGCTGTACCTGGCCCTCACGCTGGAACCCGTCGAGCAAGCGGTTACGCAGCAGCACCGGGGCCGCATCGCTCCAGCGCGCGCCCTTGTAGCTGCTCACCACATTGCCCTgg                                                                                         <  2:555111/150‑1 (MQ=255)                                                                  gTCTGCCTGCAGGTTACTGTCGTCAGCGCTCAGGCGCTGTACCTGGCCCTCACGCTGGAACCCGTCGAGCAAGCGGTTACGCAGCAGCACCGGGGCCGCATCGCTCCAGCGCGCGCCCTTGTAGCTGCTCACCACATTGCCCTGGGGAAc                                                                                    >  2:395781/1‑150 (MQ=255)                                                                       cctgcAGGTTACTGTCGTCAGCGCTCAGGCGCTGTACCTGGCCCTCACGCTGGAACCCGTCGAGCAAGCGGTTACGCAGCAGCACCGGGGCCGCATCGCTCCAGCGCGCGCCCTTGTAGCTGCTCACCACATTGCCCTGGGGAACCACgg                                                                               >  1:389491/1‑150 (MQ=255)                                                                          gcAGGTTACTGTCGTCAGCGCTCAGGCGCTGTACCTGGCCCTCACGCTGGAACCCGTCGAGCAAGCGGTTACGCAGCAGCACCgg                                                                                                                                             <  2:590130/85‑1 (MQ=255)                                                                          gcAGGTTACTGTCGTCAGCGCTCAGGCGCTGTACCTGGCCCTCACGCTGGAACCCGTCGAGCAAGCGGTTACGCAGCAGCACCgg                                                                                                                                             >  1:590130/1‑85 (MQ=255)                                                                          gcAGGTTACTGTCGTCAGCGCTCAGGCGCTGTACCTGGCCCTCACGCTGGAACCCGTCGAGCAAGCGGTTACGCAGCAGCACCGGGGCCGCATCGCTCCAGCGCGCGCCCTTGTAGCTGCTCACCACATTGCCCTGGGGAACCACGGCaa                                                                            <  1:395781/150‑1 (MQ=255)                                                                            aGGTTACTGTCGTCAGCGCTCAGGCGCTGTACCTGGCCCTCACGCTGGAACCCGTCGAGCAAGCGGTTACGCAGCAGCACCGGGGCCGCATCGCTCCAGCGCGCGCCCTTGTAGCTGCTCACCACATTGCCCTGGGGAACCACGGCAATc                                                                          <  2:387482/150‑1 (MQ=255)                                                                                       gtcAGCGCTCAGGCGCTGTACCTGGCCCTCACGCTGGAACCCGTCGAGCAAGCGGTTACGCAGCAGCACCGGGGCCGCATCGCTCCAGCGCGCGCCCTTGTAg                                                                                                              >  1:583519/1‑103 (MQ=255)                                                                                       gtcAGCGCTCAGGCGCTGTACCTGGCCCTCACGCTGGAACCCGTCGAGCAAGCGGTTACGCAGCAGCACCGGGGCCGCATCGCTCCAGCGCGCGCCCTTGTAg                                                                                                              <  2:583519/103‑1 (MQ=255)                                                                                           gcgcTCAGGCGCTGTACCTGGCCCTCACGCTGGAACCCGTCGAGCAAGCGGTTACGCAGCAGCACCGGGGCCGCATCGCTCCAGCGCGCGCCCTTGTAGCTGCTCACCACATTGCCCTGGGGAACCACGGCAATCCTTGGCCGGGCCaag                                                           <  1:146730/150‑2 (MQ=255)                                                                                                   gcgcTGTACCTGGCCCTCACGCTGGAACCCGTCGAGCAAGCGGTTACGCAGCAGCACCGGGGCCGCATCGCTCCAGCGCGCGCCCTTGTAGCTGCTCACCACATTGCCCTGGGGAACCACGGCAATCCTTGGCCCGGCCAACACTTCACt                                                   >  1:375341/1‑150 (MQ=255)                                                                                                     gcTGTACCTGGCCCTCACGCTGGAACCCGTCGAGCAAGCGGTTACGCAGCAGCACCGGGGCCGCATCGCTCCAGCGCGCGCCCTTGTAGCTGCTCACCACATTGCCCTGGGGAACCACGGCAATCCTTGGCCCCGCCAACACTTCACTgg                                                 >  2:305940/1‑150 (MQ=255)                                                                                                             tGGCCCTCACGCTGGAACCCGTCGAGCAAGCGGTTACGCAGCAGCACCGAGACCGCATCGCTCCAGCGCGCGCCCTTGTAGCTGCTCACCACATTGCCCTGGGGAACCACGGCAATCCTTGGCCCGGCCAACACTTCACTGGCCAGCGGc                                         >  1:700937/1‑150 (MQ=255)                                                                                                                  cTCACGCTGGAACCCGTCGAGCAAGTGGTTACGCAGCAGCACCGGGGCCGCATCGCTCCAGCGCGCGCCCTTGTAGCTGCTCACCACATTGCCCTGGGGAACCACGGCAATCCTTGGCCCGGCCAACACTTCACTGGCCAGCGGCTTGtt                                    <  2:511226/150‑1 (MQ=255)                                                                                                                   tCACGCTGGAACCCGTCGAGCAAGCGGTTACGCAGCAGCACCGGGGCCGCATCGCTCCAGCGCGCGCCCTTGTAGCTGCTCACCACATTGCCCTggg                                                                                        >  1:665252/1‑97 (MQ=255)                                                                                                                   tCACGCTGGAACCCGTCGAGCAAGCGGTTACGCAGCAGCACCGGGGCCGCATCGCTCCAGCGCGCGCCCTTGTAGCTGCTCACCACATTGCCCTggg                                                                                        <  2:665252/97‑1 (MQ=255)                                                                                                                       gCTGGAACCCGTCGAGCAAGCGGTTACGCAGCAGCACGGGGGCCGCATCGCTCCAGCGCGCGCCCTTGTAGCTGCTCACCACATTGCCCTGGGGAACCACGGCAATGCTTGGCGCAGCCAACACTTCACTCGCCAGCAGCGTGTTAAggg                               >  2:396888/1‑149 (MQ=255)                                                                                                                         tGGAACCCGTCGAGCAAGCGGTTACGCAGCAGCACCGGGGCCGCATCGCTCCAGCGCGCGCCCTTGTAGCTGCTCACCACATTGCCCTGGGGAACCACGGCAATCCTTGGCCCGGCCAACACTTCACTGGCCAGCGGCTTGTTCAGgcgc                             >  1:706047/1‑150 (MQ=255)                                                                                                                            gtggttccccagggcaatgtggtgAGCAGCACCGGGGCCGCATCGCTCCAGCGCGCGCCCTTGTAgctgc                                                                                                          <  2:422492‑M1/46‑1 (MQ=255)                                                                                                                            gtggttccccagggcaatgtggtgAGCAGCACCGGGGCCGCATCGCTCCAGCGCGCGCCCTTGTAgctgc                                                                                                          >  1:422492‑M1/25‑70 (MQ=255)                                                                                                                                           cGGTTACGCAGCAGCACCGGGGCCGCATCGCTCCAGCGCGCGCCCTTGTAGCTGCTCACCACATTGCCCTGGGGAACCACGGCAATCCTTGGCCCGGCCAACACTTCACTGGCCAGCGGCTTGTTCAGGCGCAATGACCAGTCCAgcggc           <  1:182947/150‑1 (MQ=255)                                                                                                                                            ggTTACGCAGCAGCACCGGGGCCGCATCGCTCCAGCGCGCGCCCTTGTAGCTGCTCACCACATTGCCCTGGGGAACCACGGCAATCCTTGGCCCGGCCAACACTTCACTGGCCAGCGGCTTGTTCAGGCGCAATGACCAGTCCAgcggcg          >  2:172724/1‑150 (MQ=255)                                                                                                                                                  gcagcagcaCCGGGGCCGCATCGCTCCAGCGCGCGCCCTTGTAGCTGCTCACCACATTGCCCTGGGGAACCACGGCAATCCTTGGCCCGGCCAACACTTCACTGGCCAGCGGCTTGTTCAGGCGCAATGACCAGTCCAGCGGCGGCGCtg    >  1:115321/1‑150 (MQ=255)                                                                                                                                                    AGCAGCACCGGGGCCGCATCGCTCCAGCGCGCGCCCTTGTAGCTGCTCACCACATTGCCCTGGGGAACCACGGCAATCCTTGGCCCGGCCAACACTTCACTGGCCAGCGGCTTGTTCAGGCGCAATGACCAGTCCAGCGGCGGCGCtgtg  <  1:403781‑M1/150‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                      ACCTCCACTGCCCCATCCGTGCGGTATTCACTCTGAAAGGCCTGCAGCTCGCCGGCCAGTTCGTAGTCTGCCTGCAGGTTACTGTCGTCAGCGCTCAGGCGCTGTACCTGGCCCTCACGCTGGAACCCGTCGAGCAAGCGGTTACGCAGCAGCACCGGGGCCGCATCGCTCCAGCGCGCGCCCTTGTAGCTGCTCACCACATTGCCCTGGGGAACCACGGCAATCCTTGGCCCGGCCAACACTTCACTGGCCAGCGGCTTGTTCAGGCGCAATGACCAGTCCAGCGGCGGCGCTGTG  >  NC_002947/147671‑147967

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.