New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 204937 | 21 (0.660) | 4 (0.130) | 4/238 | NT | 14.2% | coding (10443/26049 nt) | PP_0168 | putative surface adhesion protein |
? | NC_002947 | = 211590 | 28 (0.920) | coding (17096/26049 nt) | PP_0168 | putative surface adhesion protein |
CTCAGGGTGATGACGTCTACAACGACGCTGGCCAGATCAGCCTGGGTATCACGTCTGCTGTGGATGTAGACGGTCGCACCTTCGAAAACCTGGAGCTGGGCGGTGCGGCTTCGGTTCAAGTGACCGATACCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/204804‑204937 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaccACTTCGTCGGTGGTATCGGTCACTTGAACCGAAGCCGCACCGCCCAGCTCGAGGTTCTCGAAGGTCGCACCAGTGGCGTCCACCGCCGAGTTGATGCCCAGGCTGATCTGGCCAGCGTCGTTGTAAACGTCATCACCCTGCGCAGCG < NC_002947/211590‑211444 CTCAGGGTGATGACGTCTACAACGACGCTGGCCAGATCAGCCTGGGTATCACGTCTGCTGTGGATGTAGACGGTCGCACCTTCGAAAACCTGGAGCTGGGCGGTGCGGCTTCGGTTCAAGTGACCGATACCACCACTTCGTCGGTGGTAT < 1:80102/150‑1 AACGACGCTGGCCAGATCAGCCTGGGTATCACGTCTGCTGTGGATGTAGACGGTCGCACCTTCGAAAACCTGGAGCTGGGCGGTGCGGCTTCGGTTCAAGTGACCGATACCACCACTTCGTCGGTGGTATCGGTCACTTGAACCGAAGCC < 1:838473/150‑1 TCGCACCTTCGAAAACCTGGAGCTGGGCGGTGCGGCTTCGGTTCAAGTGACCGATACCACCACTTCGTCGGTGGTATCGGTaa > 1:408559/1‑81 TCGCACCTTCGAAAACCTGGAGCTGGGCGGTGCGGCTTCGGTTCAAGTGACCGATACCACCACTTCGTCGGTGGTATCGGTCA < 2:408559/83‑1 CCACCACTTCGTCGGTGGTATCGGTCACTTGAACCGAAGCCGCACCGCCCAGCTCGAGGTTCTCGAAGGTCGCACCAGTGGCGTCCACCGCCGAGTTGATGCCCAGGCTGATCTGGCCAGCGTCGTTGTAAACGTCATCACCCTGCGCAG > 2:643368/1‑150 ACCACTTCGTCGGTGGTATCGGTCACTTGAACCGAAGCCGCACCGCCCAGCTCGAGGTTCTCGAAGGTCGCACCAGTGGCGTCCACCGCCGAGTTGATGCCCAGGCTGATCTGGCCAGCGTCGTTGTAAACGTCATCACCCTGCGCAGCG > 2:197912/1‑150 CTCAGGGTGATGACGTCTACAACGACGCTGGCCAGATCAGCCTGGGTATCACGTCTGCTGTGGATGTAGACGGTCGCACCTTCGAAAACCTGGAGCTGGGCGGTGCGGCTTCGGTTCAAGTGACCGATACCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/204804‑204937 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaccACTTCGTCGGTGGTATCGGTCACTTGAACCGAAGCCGCACCGCCCAGCTCGAGGTTCTCGAAGGTCGCACCAGTGGCGTCCACCGCCGAGTTGATGCCCAGGCTGATCTGGCCAGCGTCGTTGTAAACGTCATCACCCTGCGCAGCG < NC_002947/211590‑211444 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |