New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 228165 | 20 (0.630) | 5 (0.160) | 6/238 | NT | 18.8% | coding (991/2088 nt) | PP_0176 | putative efflux transporter |
? | NC_002947 | = 228187 | 24 (0.790) | coding (1013/2088 nt) | PP_0176 | putative efflux transporter |
GCAGATCGGCCGCCTGCAGCCCGCTACAGCCGCCCTCGACCAGCGCGCCGAGCTGCTGTTGTCCAACGCCCTGTACCGCCTGACCGAATGGGCCGACCTGTGGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/228059‑228165 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaggGCGTGCTGCAGGGTGCAGCA‑GTCCTGCCACAGGTCGGCCCATTCGGTCAGGCGGTACAGGGCGTTGGACAACAGCAGCTCGGCGCGCTGGTCGAGGGCGGCTGTAGCGGGCTGCAGGCGGCCGATCTGC < NC_002947/228187‑228059 GCAGATCGGCCGCCTGCAGCCCGCTACAGCCGCCCTCGACCAGCGCGCCGAGCTGCTGTTGTCCAACGCCCTGTACCGCCTGACCGAATGGGCCGACCTGTGGCAGGGCGTGCTGCAGGGTGCAGCA‑GTCCTGCCA < 2:494615/136‑1 CAACGCCCTGTACCGCCTGACCGAATGGGCCGACCTGTGGCAGGGCGTGCTGCAGGGTGCAGCA‑GTCCT > 1:143689/1‑69 CAACGCCCTGTACCGCCTGACCGAATGGGCCGACCTGTGGCAGGGCGTGCTGCAGGGTGCAGCA‑GTCCT < 2:143689/69‑1 ACCTGTGGCAGGAC‑TGCTGCACCCTGCAGCACGCCCTGCCACAGGTCGGCCCATTCGGTCAGGCGGTACAGGGCGTTGGACAACAGCAGCTCGGCGCGCTGGTCGAGGGCGGCTGTAGCG < 1:428463/120‑1 ACCTGTGGCAGGAC‑TGCTGCACCCTGCAGCACGCCCTGCCACAGGTCGGCCCATTCGGTCAGGCGGTACAGGGCGTTGGACAACAGCAGCTCGGCGCGCTGGTCGAGGGCGGCTGTAGCG > 2:428463/1‑120 TGGCAGGAC‑TGCTGCACCCTGCAGCACGCCCTGCCACAGGTCGGCCCATTCGGTCAGGCGGTACAGGGCGTTGGACAACAGCAGCTCGGCGCGCTGGTCGAGGGCGGCTGTAGCGGGCTGCAGGCGGCCGATCTGC < 1:494615/136‑1 GCAGATCGGCCGCCTGCAGCCCGCTACAGCCGCCCTCGACCAGCGCGCCGAGCTGCTGTTGTCCAACGCCCTGTACCGCCTGACCGAATGGGCCGACCTGTGGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/228059‑228165 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaggGCGTGCTGCAGGGTGCAGCA‑GTCCTGCCACAGGTCGGCCCATTCGGTCAGGCGGTACAGGGCGTTGGACAACAGCAGCTCGGCGCGCTGGTCGAGGGCGGCTGTAGCGGGCTGCAGGCGGCCGATCTGC < NC_002947/228187‑228059 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |