New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 235331 = | 29 (0.920) | 11 (0.400) | 10/216 | NT | 31.8% | intergenic (+28/+97) | PP_0183/argH | glutathione S‑transferase/argininosuccinate lyase |
? | NC_002947 | 235390 = | 22 (0.800) | intergenic (+87/+38) | PP_0183/argH | glutathione S‑transferase/argininosuccinate lyase |
TGGTACGGCGCCGGCGCAGGTGCGTGCTGCCGTCGTTCGTGGCAAGGCCCTGTTGGCGTCTCGCTAATCCCCCAAGGCGAGGGCTTCGCCCTCGTTCGCGGGCACGCCCGCTCCCACAGGTAATGCACAAGTTTCAAAAACGGTGCAGACCTGTGGGAGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/235494‑235331 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acctgtgggagcgggcGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTGCGCCGGCGCCGTACCACCAATGTGGTCACGCGCATTCACCGAGCCTTCCAGCGTCAGCAC > NC_002947/235390‑235538 gGGTACGGCGCCGGCGCAGGTGCGTGCTGCCGTCGTTCGTGGCAAGGCCCTGTTGGCGTCTCGCTAATCCCCCAAGGCGAGGGCTTCGCCCTCGTTCGCGGGCACGCCCGCTCCCACAGGTAATGCACAAGTTTCAAAAACGGTGCAGAC < 2:407658/149‑1 ACGGCGCCGGCGCAGGTGCGTGCTGCCGTCGTTCGTGGCAAGGCCCTGTTGGCGTCTCGCTAATCCCCCAAGGCGAGGGCTTCGCCCTCGTTCGCGGGCACGCCCGCTCCCACAGGTAATGCACAAGTTTCAAAAACGGTGCAGACCTGT < 2:208190/150‑1 GCGCCGGCGCAGGTGAGTGCTGCCGTCGTTCGTGGCAAGGCCCTGTTGGCGTCTCGCTAATCCCCCAAGGCGAGGGCTTCGCCCTCGTTCGCGGGCACGCCCCCTCCCACAGGTAACGCACAAGTTTCAAAAACGGTGCAGACCTGTGGG > 2:814591/1‑150 TCGCTAATCCCCCAAGGCGAGGGCTTCGCCCTCGTTCGCGGGCACGCCCGCTCCCACAGGTAATGCACAAGTTTCAAAAACGGTGCAGACCTGTGGGAGCGG > 2:580169/1‑102 TCGCTAATCCCCCAAGGCGAGGGCTTCGCCCTCGTTCGCGGGCACGCCCGCTCCCACAGGTAATGCACAAGTTTCAAAAACGGTGCAGACCTGTGGGAGCGG < 1:580169/102‑1 TCCCACAGGTAATGCACAAGTTTCAAAAACGGTGCAGACCTGTGGGAGCGGGCATGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTGGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTGCGCCGGCG > 1:545687/1‑150 CCACAGGTAATGCACAAGTTTCAAAAACGGTGCAGACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTGCGCCGGCGCC > 1:332007/1‑150 CACAGGTAATGCACAAGTTTCAAAAACGGTGCAGACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGG > 1:230759/1‑86 CACAGGTAATGCACAAGTTTCAAAAACGGTGCAGACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGG < 2:230759/86‑1 ACAGGTAATGCACAAGTTTCAAAAACGGTGCAGACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGG > 1:325176/1‑83 ACAGGTAATGCACAAGTTTCAAAAACGGTGCAGACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGG < 2:325176/83‑1 ACAGGTAATGCACAAGTTTCAAAAACGGTGCAGACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTC > 1:51232/1‑76 ACAGGTAATGCACAAGTTTCAAAAACGGTGCAGACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTC < 2:51232/76‑1 GCACAAGTTTCAAAAACGGTGCAGACCTGTGGGAGCGGGCATGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTGGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTGCGCCGGCGCCGTACCACCAAT < 2:545687/150‑1 AAGTTTCAAAAACGGTGCAGACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGC < 1:648501/116‑1 AAGTTTCAAAAACGGTGCAGACCTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGC > 2:648501/1‑116 CTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTGCGCCGGCGCCGTACCACCAATGTGGTCACGCGCATTCACCGAGCCTT > 1:47630/1‑150 CTGTGGGAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTGCGCCGGCGCCGTACCACCAATGTGGTCACGCGCATTCACCGAGCCTT > 1:297684/1‑150 GAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTGCGCCGGCGCCGTACCACCAATGTGGTCACGC > 1:242677/1‑128 GAGCGGGCGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTGCGCCGGCGCCGTACCACCAATGTGGTCACGC < 2:242677/128‑1 GCGGGCATGCCCGCGAACGAGGGCGAAGCCCTCGCCCTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTGCGCCGGCGCCGTACCACCAATGTGGTCACGCGCATTCACCGAGCCTTCCAGCGTC < 1:161200/150‑1 CGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTGCGCCGGCGCCGTACCACCAATGTGGTCACGCGCATTCACCGAGCCTTCCAGCGTCAGCAC < 2:332007/150‑1 TGGTACGGCGCCGGCGCAGGTGCGTGCTGCCGTCGTTCGTGGCAAGGCCCTGTTGGCGTCTCGCTAATCCCCCAAGGCGAGGGCTTCGCCCTCGTTCGCGGGCACGCCCGCTCCCACAGGTAATGCACAAGTTTCAAAAACGGTGCAGACCTGTGGGAGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/235494‑235331 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acctgtgggagcgggcGTGCCCGCGAACGAGGGCGAAGCCCTCGCCTTGGGGGATTAGCGAGACGCCAACAGGGCCTTGCCACGAACGACGGCAGCACGCACCTGCGCCGGCGCCGTACCACCAATGTGGTCACGCGCATTCACCGAGCCTTCCAGCGTCAGCAC > NC_002947/235390‑235538 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |