New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 318094	34 (1.070)	3 (0.100)	3/226	NT	9.4%	coding (1650/1815 nt)	PP_0264	sensor histidine kinase
	?	NC_002947	= 318134	27 (0.940)					coding (1610/1815 nt)	PP_0264	sensor histidine kinase

AGGGGTCCTCCGAATTGGGCAAAGTAGCGCCAGATGCGGCCACCCGCAGCTGGAGAGTCAGCATTGCGCCACCTTCCGGGTGGTTGGCCAGCAGCAGTTCACCGCCCAGGGCGCGCATCAGGCTTTCACAGATGGCCAGCCCCAGGCCCAGGCCCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/317937‑318094 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaggccctggAGCACGCCAAGGAGCCGTTCTTCACCACCAAGACCCGCACCCAGGGCCTGGGCCTGGGGCTGGCCATCTGTGAAAGCCTGATGCGCGCCCTGGGCGGTGAACTGCTGCTGGCCAACCACCCGGAAGGTGGCGCAATGCTGACTCTCCAG  <  NC_002947/318134‑317986                                                                                                                                                                                                                                                                                                                     AGGGGTCCTCCGAATTGGGCAAAGTAGCGCCAGATGCGGCCACCCGCAGCTGGAGAGTCAGCATTGCGCCACCTTCCGGGTGGTTGGCCAGCAGCAGTTCACCGCCCAGGGCGCGCATCAGGCTTTCACAGATGGCCAGCCCCAGGCCCA                                                                                                                                                               <  2:128447/150‑1       CCTCCGAATTGGGCAAAGTAGCGCCAGATGCGGCCACCCGCAGCTGGAGAGTCAGCATTGCGCCACCTTCCGGGTGGTTGGCCAGCAGCAGTTCACCGCCCAGGGCGCGCATCAGGCTTTCACAGATGGCCAGCCCCAGGCCCAGGCCCT                                                                                                                                                         <  1:837955/150‑1                  GGCAAAGTAGCGCCAGATGCGGCCACCCGCAGCTGGAGAGTCAGCATTGCGCCACCTTCCGGGTGGTTGGCCAGCAGCAGTTCACCGCCCAGGGCGCGCATCAGGCTTTCACAGATGGCCAGCCCCAGGCCCAG                                                                                                                                                              >  1:90393/1‑134                  GGCAAAGTAGCGCCAGATGCGGCCACCCGCAGCTGGAGAGTCAGCATTGCGCCACCTTCCGGGTGGTTGGCCAGCAGCAGTTCACCGCCCAGGGCGCGCATCAGGCTTTCACAGATGGCCAGCCCCAGGCCCAG                                                                                                                                                              <  2:90393/134‑1                                                            AGCATTGCGCCACCTTCCGGGTGGTTGGCCAGCAGCAGTTCACCGCCCAGGGCGCGCATCAGGCTTTCACAGATGGCCAGCCCCAGGCCCAGGCCCTGGAGCACGCCAAGGAGCCGTTCTTCACCACCAAGACCCGCACCCAGGGCCTGG                                                                                                    <  1:554615/150‑1                                                                                                      CCGCCCAGGGCGCGCATCAGGCTTTCACAGATGGCCAGCCCCAGGCCCAGGCCCTGGAGCACGCCAAGGAGCCGTTCTTCACCACCAAGACCCGCACCCAGGGCC                                                                                                       >  1:826531/1‑105                                                                                                      CCGCCCAGGGCGCGCATCAGGCTTTCACAGATGGCCAGCCCCAGGCCCAGGCCCTGGAGCACGCCAAGGAGCCGTTCTTCACCACCAAGACCCGCACCCAGGGCC                                                                                                       <  2:826531/105‑1                                                                                                                                                      AGGCCCTGGAGCACGCCAAGGAGCCGTTCTTCACCACCAAGACCCGCACCCAGGGCCTGGGCCTGGGGCTGGCCATCTGTGAAAGCCTGATGCGCGCCCTGGGCGGTGAACTGCTGCTGGCCAACCACCCGGAAGGTGGCGCAATGCTGA          >  2:629813/1‑150                                                                                                                                                              GAGCACGCCAAGGAGCCGTTCTTCACCACCAAGACCCGCACCCAGGGCCTGGGCCTGGGGCTGGCCATCTGTGAAAGCCTGATGCGCGCCCTGGGCGGTGAACTGCTGCTGGCCAACCACCCGGAAGGTGGCGCAATGCTGACTCTCCAG  <  2:462927/150‑1                                                                                                                                                                                                                                                                                                                     AGGGGTCCTCCGAATTGGGCAAAGTAGCGCCAGATGCGGCCACCCGCAGCTGGAGAGTCAGCATTGCGCCACCTTCCGGGTGGTTGGCCAGCAGCAGTTCACCGCCCAGGGCGCGCATCAGGCTTTCACAGATGGCCAGCCCCAGGCCCAGGCCCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/317937‑318094 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaggccctggAGCACGCCAAGGAGCCGTTCTTCACCACCAAGACCCGCACCCAGGGCCTGGGCCTGGGGCTGGCCATCTGTGAAAGCCTGATGCGCGCCCTGGGCGGTGAACTGCTGCTGGCCAACCACCCGGAAGGTGGCGCAATGCTGACTCTCCAG  <  NC_002947/318134‑317986

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.