New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 636792 = | 27 (0.850) | 5 (0.160) | 5/238 | NT | 16.7% | coding (1013/1350 nt) | mpl | UDP‑N‑acetylmuramate:L‑alanyl‑gamma‑D‑glutamyl‑ meso‑diaminopimelate ligase |
? | NC_002947 | 636825 = | 24 (0.790) | coding (1046/1350 nt) | mpl | UDP‑N‑acetylmuramate:L‑alanyl‑gamma‑D‑glutamyl‑ meso‑diaminopimelate ligase |
GCCGGCGCATACCAGATCACCTGGTCAGCGTCGTTGACGCTTTCTGGCAGGCCGTCACGATGGGCGCCGAGCTTCATCGAGTTGGAGCGTGGCTCGATCACCGCGATCACAGGCGCCTCCCCCACCCGCTTGCGCAGGCCGTCGAGCGTGGTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/636945‑636792 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtggGGGAGGCGCCTGTGATCGCGGTGATCGAGCCACGCTCCAACTCGATGAAGCTCGGCGCCCATCGTGACGGCCTGCCAGAAAGCGTCAACGACGCTGACCAGGTGATCTGGTATGCGCCGGCCAACCTCGGCTGGGACCTGG > NC_002947/636825‑636965 GCCGGCGCATACCAGATCACCTGGTCAGCGTCGTTGACGCTTTCTGGCAGGCCGTCACGATGGGCGCCGAGCTTCATCGAGTTGGAGCGTGGCTCGATCACCGCGATCACAGGCGCCTCCCCCACCCGCTTGCGCAGGCCGTCGAGCGTG < 2:515430/150‑1 CCGGCGCATACCAGATCACCTGGTCAGCGTCGTTGACGCTTTCTGGCAGGCCGTCACGATGGGCGCCGAGCTTCATCGAGTTGGAGCGTGGCTCGATCACCGCGATCACAGGCGCCTCCCCCACCCGCTTGCGCAGGCCGTCGAGCGTGG > 2:698274/1‑150 GGCGCATACCAGATCACCTGGTCAGCGTCGTTGACGCTTTCTGGCAGGCCGTCACGATGGGCGCCGAGCTTCATCGAGTTGGAGCGTGGCTCGATCACCGCGATCACAGGCGCCTCCCCCACCCGCTTGCGCAGGCCGTCGAGCGTGGTG < 2:599495/150‑1 ACCTGGTCAGCGTCGTTGACGCTTTCTGGCAGGCCGTCACGATGGGCGCCGAGCTTCATCGAGTTGGAGCGTGGCTCGATCACCGCGATCACAGGCGCCTCCCCCACCCGCTTGCGCAGGCCGTCGAGCGTGGTG < 1:381647/135‑1 ACCTGGTCAGCGTCGTTGACGCTTTCTGGCAGGCCGTCACGATGGGCGCCGAGCTTCATCGAGTTGGAGCGTGGCTCGATCACCGCGATCACAGGCGCCTCCCCCACCCGCTTGCGCAGGCCGTCGAGCGTGGTG > 2:381647/1‑135 CCCCCACCCGCTTGCGCAGGCCGTCGAGCGTGGTGGGGGAGGCGCCTGTGATCGCGGTGATCGAGCCACGCTCCAACT > 1:724465/1‑78 CCCCCACCCGCTTGCGCAGGCCGTCGAGCGTGGTGGGGGAGGCGCCTGTGATCGCGGTGATCGAGCCACGCTCCAACT < 2:724465/78‑1 CCCCACCCGCTTGCGCAGGCCGTCGAGCGTGGTGGGGGAGGCGCCTGTGATCGCGGTGATCGAGCCACGCTCCAACTCGATGAAGCTCGGCGCCCATCGTGACGGCCTGCCAGAAAGCGTCAACGACGCTGACCAGGTGATCTGGTATGC > 2:336151/1‑150 CCGCTTGCGCAGGCCGTCGAGCGTGGTGGGGGAGGCGCCTGTGATCGCGGT > 1:169252/1‑51 CCGCTTGCGCAGGCCGTCGAGCGTGGTGGGGGAGGCGCCTGTGATCGCGGT < 2:169252/51‑1 GCGTGGTGGGGGAGCCGCCTGTGATCGCGGTGATCGAGCCACGCTCCAACTCGATGAAGCTCGGCGCCCATCGTGACGGCCTGCCAGAAAGCGTCAACGACGCTGACCAGGTGATCTGGTATGCGCCGGCCAACCTCGGCTGGGACCTGG < 1:336151/150‑1 GCCGGCGCATACCAGATCACCTGGTCAGCGTCGTTGACGCTTTCTGGCAGGCCGTCACGATGGGCGCCGAGCTTCATCGAGTTGGAGCGTGGCTCGATCACCGCGATCACAGGCGCCTCCCCCACCCGCTTGCGCAGGCCGTCGAGCGTGGTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/636945‑636792 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtggGGGAGGCGCCTGTGATCGCGGTGATCGAGCCACGCTCCAACTCGATGAAGCTCGGCGCCCATCGTGACGGCCTGCCAGAAAGCGTCAACGACGCTGACCAGGTGATCTGGTATGCGCCGGCCAACCTCGGCTGGGACCTGG > NC_002947/636825‑636965 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |