New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 938458 | 43 (1.360) | 3 (0.100) | 3/232 | NT | 7.4% | coding (7167/18933 nt) | PP_0806 | surface adhesion protein |
? | NC_002947 | = 938510 | 35 (1.180) | coding (7115/18933 nt) | PP_0806 | surface adhesion protein |
GGTGCCGTCCGGGTTGACCGAGCCGTTGGCCAGTACATTGCCCTGGGCATCGCGCACCTGCACGCTGGCCCCGGCTTCGCCGCGGCCATTGAGCTGGGCGCCGGCCAGGCCAACTACCAAGTTGGTTGCGGCATCCGGTGGTGTGGTGTCGCCACCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/938302‑938458 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccaccgACGCCGCCGGCAACACCTCCACGGCCGGCGACATCACCGCGCCGGACATCGACGGTGGCGACACCACACCACCGGATGCCGCAACCAACTTGGTAGTTGGCCTGGCCGGCGCCCAGCTCAATGGCCGCGGCGAAGCCGGGGCCAGCGT < NC_002947/938510‑938363 GGTGCCGTCCGGGTTGACCGAGCCGTTGGCCAGTACATTGCCCTGGGCATCGCGCACCTGCACGCTGGCCCCGGCTTCGCCGCGGCCATTGAGCTGGGCGCCGGCCAGGCCAACTACCAAGTTGGTTGCGGCATCCGGTGGTGTGGTGTC < 1:445780/150‑1 GCCGTCCGGGTTGACCGAGCCGTTGGCCAGTACATTGCCCTGGGCATCGCGCACCTGCACGCTGGCCCCGGCTTCGCCGCGGCCATTGAGCTGGGCGCCGGCCAGGCCAACTACCAAGTTGGTTGCGGCATCCGGTGGTGTGGTGTCGCC > 2:507164/1‑150 CCCCGGCTTCGCCGCGGCCATTGAGCTGGGCGCCGGCCAGGCCAACTACCAAGTTGGTTGCGGCATCCGGTGGTGTGGTGTCGCCACCGACGCCGCCGGCAACACCTCCACGGCCGGCGACATCACCGCGCCGGACATCGACGGTGGCGA < 1:507164/150‑1 CCGGCTTCGCCGCGGCCATTGAGCTGGGCGCCGGCCAGGCCAACTACCAAGTTGGTTGCGGCATCCGGTGGTGTGGTGTCGCCACCGACGCCGCCGGCAACACCTCCACGGCCGGCGACATCACCGCGCCGGACATCGA > 1:730145/1‑139 CCGGCTTCGCCGCGGCCATTGAGCTGGGCGCCGGCCAGGCCAACTACCAAGTTGGTTGCGGCATCCGGTGGTGTGGTGTCGCCACCGACGCCGCCGGCAACACCTCCACGGCCGGCGACATCACCGCGCCGGACATCGA < 2:730145/139‑1 CGCCACCGACGCCGCCGGCAACACCTCCACGGCCGGCGACATCACCGCGCCGGACATCGACGGTGGCGACACCACACCACCGGATGCCGCAACCAACTTGGTAGTTGGCCTGGCCGGCGCCCAGCTCAATGGCCGCGGCGAAGCCGGGGC < 2:171740/150‑1 CCACCGACGCCGCCGGCAACACCTCCACGGCCGGCGACATCACCGCGCCGGACATCGACGGTGGCGACACCACACCACCGGATGCCGCAACCAACTTGGTAGTTGGCCTGGCCGGCGCCCAGCTCAATGGCCGCGGCGAAGCCGGGGCCA > 2:167934/1‑150 CACCGACGCCGCCGGCAACACCTCCACGGCCGGCGACATCACCGCGCCGGACATCGACGGTGGCGACACCACACCACCGGATGCCGCAACCAACTTGGTAGTTGGCCTGGCCGGCGCCCAGCTCAATGGCCGCGGCGAAGCCGGGGCCAG > 1:751243/1‑150 CGACGCCGCCGGCAACACCTCCACGGCCGGCGACATCACCGCGCCGGACATCGACGGTGGCGACACCACACCACCGGATGCCGCAACCAACTTGGTAGTTGGCCTGGCCGGCGCCCAGCTCAATGGCCGCGGCGAAGCCGGGGCCAGCGT > 2:471292/1‑150 GGTGCCGTCCGGGTTGACCGAGCCGTTGGCCAGTACATTGCCCTGGGCATCGCGCACCTGCACGCTGGCCCCGGCTTCGCCGCGGCCATTGAGCTGGGCGCCGGCCAGGCCAACTACCAAGTTGGTTGCGGCATCCGGTGGTGTGGTGTCGCCACCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/938302‑938458 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccaccgACGCCGCCGGCAACACCTCCACGGCCGGCGACATCACCGCGCCGGACATCGACGGTGGCGACACCACACCACCGGATGCCGCAACCAACTTGGTAGTTGGCCTGGCCGGCGCCCAGCTCAATGGCCGCGGCGAAGCCGGGGCCAGCGT < NC_002947/938510‑938363 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |