New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 996920	31 (0.980)	9 (0.310)	7/228	NT	21.8%	coding (679/2550 nt)	PP_0860	sulfite reductase flavoprotein subunit
	?	NC_002947	= 996935	36 (1.240)					coding (664/2550 nt)	PP_0860	sulfite reductase flavoprotein subunit

GCGGCAGGCGCAGGTTGTAGGTGGACAGGCCTGGGCCCGCGGCGTCCTTGAGGTTGGCCCAGATGGCGTCGTAGTCCACCACCAGCGGCGGCGCATTCCTGTCGACGTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/996764‑996920 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgctggccGACGC‑GCCGGCTGCG‑‑GGCCAGCAGCAAAAACGGGGTGAAGGCCGTGGCCGGCACGGGCCGCAGAACGTCGACAGGAATGCGCCGCCGCTGGTGGTGGACTACGACGCCATCTGGGCC  <  NC_002947/996935‑996819                                                                                                                                                                                                                                                                                       GCGGCAGGCGCAGGTTGTAGGTGGACAGGCCTGGGCCCGCGGCGTCCTTGAGGTTGGCCCAGATGGCGTCGTAGTCCACCACCAGCGGCGGCGCATTCCTGTCGACGTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCT                                                                                                                                 <  2:619376/150‑1     CAGGCGCAGGTTGTAGGTGGACAGGCCTGGGCCCGCGGCGTCCTTGAGGTTGGCCCAGATGGCGTCGTAGTCCACCACCAGCGGCGGCGCATTCCTGTCGACGTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTG                                                                                                                             <  1:514288/150‑1     CAGGCGCAGGTTGTAGGTGGACAGGCCTGGGCCCGCGGCGTCCTTGAGGTTGGCCCAGATGGCGTCGTAGTCCACCACCAGCGGCGGCGCATTCCTGTCGACGTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTG                                                                                                                             <  2:72790/150‑1                                    CCCGCGGCGTCCTTGAGGTTGGCCCAGATGGCGTCGTAGTCCACCACCAGCGGCGGCGCATTCCTGTCGACGTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCCGACGC‑GCCGGCTGCG‑‑GGCCAGCAGCAAA                                                                                           <  1:410345/150‑1                                               CTTGAGGTTGGCCCAGATGGCGTCGTAGTCCACCACCAGCGGCGGCGCATTCCTGTCGACGTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCT                                                                                                                                 >  1:682364/1‑104                                               CTTGAGGTTGGCCCAGATGGCGTCGTAGTCCACCACCAGCGGCGGCGCATTCCTGTCGACGTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCT                                                                                                                                 <  2:682364/104‑1                                                                    GTCGTAGTCCACCACCAGCGGCGGCGCATTCCTGTCGACGTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCCGACGC‑GCCGGCTGCG‑‑GGCCAGCA                                                                                                >  1:453815/1‑113                                                                    GTCGTAGTCCACCACCAGCGGCGGCGCATTCCTGTCGACGTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCCGACGC‑GCCGGCTGCG‑‑GGCCAGCA                                                                                                <  2:453815/113‑1                                                                           TCCACCACCAGCGGCGGCGCATTCCTGTCGACGTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCCGACGC‑GCCGGCTGCG‑‑GGCCAGCA                                                                                                >  1:180198/1‑106                                                                           TCCACCACCAGCGGCGGCGCATTCCTGTCGACGTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCCGACGC‑GCCGGCTGCG‑‑GGCCAGCA                                                                                                <  2:180198/106‑1                                                                                            CGCATTCCTGTCGACGTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCCGACGC‑GCCGGCTGCG‑‑GGCCAGCA                                                                                                <  1:842666/89‑1                                                                                            CGCATTCCTGTCGACGTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCCGACGC‑GCCGGCTGCG‑‑GGCCAGCA                                                                                                >  2:842666/1‑89                                                                                                                                     CTTCACCCCGTTTTTGCTGCTGGCCCGC‑A‑GCCGGC‑GCGTCGGCCAGCAGCAAAAACGGGGTGAAGGCCGTGGCCGGCACGGGCCGCAGAACGTCGACAGGAATGCGCCGCCGCTGGTGGTGGACTACGACGCCATCTGGGCC  <  2:101876/142‑1                                                                                                                                     CTTCACCCCGTTTTTGCTGCTGGCC‑‑CGCAGCCGGC‑GCGTCGGCCAGCAGCAAAAACGGGGTGAAGGCCGTGGCCGGCCCGGGCCGCAGAACGTCGACAGGAATGCGCCGCCGCTGGTGGTGGACTACGACGCCATCTGGGCC  >  1:101876/1‑142                                                                                                                                                                                                                                                                                       GCGGCAGGCGCAGGTTGTAGGTGGACAGGCCTGGGCCCGCGGCGTCCTTGAGGTTGGCCCAGATGGCGTCGTAGTCCACCACCAGCGGCGGCGCATTCCTGTCGACGTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/996764‑996920 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgctggccGACGC‑GCCGGCTGCG‑‑GGCCAGCAGCAAAAACGGGGTGAAGGCCGTGGCCGGCACGGGCCGCAGAACGTCGACAGGAATGCGCCGCCGCTGGTGGTGGACTACGACGCCATCTGGGCC  <  NC_002947/996935‑996819

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.