| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 996920 | 31 (0.980) | 9 (0.310) | 7/228 | NT | 21.8% | coding (679/2550 nt) | PP_0860 | sulfite reductase flavoprotein subunit |
| ? | NC_002947 | = 996935 | 36 (1.240) | coding (664/2550 nt) | PP_0860 | sulfite reductase flavoprotein subunit | |||||
GCAGGTTGTAGGTGGACAGGCCTGGGCCCGCGGCGTCCTTGAGGTTGGCCCAGATGGCGTCGTAGTCCACCACCAGCGGCGGCGCATTCCTGTCGACGTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCC‑‑CGCAGCCGGC‑GCGTCGGCCAGCAGCTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCAGAACAGCCCGGTCAGGGCGAACAGAAGATAGAACAGCAGGCACCAGGTGCCGGCAACGGCGTGCAGGTCCCAGTTGAAGGCGCGGCCTT > NC_002947/996773‑997069 | gcAGGTTGTAGGTGGACAGGCCTGGGCCCGCGGCGTCCTTGAGGTTGGCCCAGATGGCGTCGTAGTCCACCACCAGCGGCGGCGCATTCCTGTCGACGTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGcc‑‑cc > 2:812267/1‑149 (MQ=255) tGTAGGTGGACAGGCCTGGGCCCGCGGCGTCCTTGAGGTTGGCCCAGATGGCGTCGTAGTCCACCACCAGCGGCGGCGCATTCCTGTCGACGTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCC‑‑CGCAGCCg < 2:315179/150‑1 (MQ=255) cccGCGGCGTCCTTGAGGTTGGCCCAGATGGCGTCGTAGTCCACCACCAGCGGCGGCGCATTCCTGTCGACGTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCCgacgcgccggctgcgggccagcagcaaa < 1:410345‑M1/150‑29 (MQ=255) ccGCGGCGTCCTTGAGGTTGGCCCAGATGGCGTCGTAGTCCACCACCAGCGGCGGCGCATTCCTGTCGACGTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCC‑‑CGCAGCCGGC‑GCGTCGGCCAGCAGCTTGt > 1:98827/1‑150 (MQ=255) gcgTCCTTGAGGTTGGCCCAGATGGCGTCGTAGTCCACCACCAGCGGCGGCGCATTCCTGTCGACGTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCC‑‑CGCAGCCGGC‑GCGTCGGCCAGCAGCTTGTTCAg > 2:556410/1‑149 (MQ=255) gcgTCCTTGAGGTTGGCCCAGATGGCGTCGTAGTCCACCACCAGCGGCGGCGCATTCCTGTCGACGTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCC‑‑CGCAGCCGGC‑GCGTCGGCCAGCAGCTTGTTCAg < 1:556410/149‑1 (MQ=255) cTTGAGGTTGGCCCAGATGGCGTCGTAGTCCACCACCAGCGGCGGCGCATTCCTGTCGACGTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCC‑‑CGCAGCCGGC‑GCGTCGGCCAGCAGCTTGTTCAGGCCTTc > 2:265132/1‑150 (MQ=255) ttGAGGTTGGCCCAGATGGCGTCGTAGTCCACCACCAGCGGCGGCGCATTCCTGTCGACGTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCC‑‑CGCAGCCGGC‑GCGTCGGCCAGCAGCTTGTTCAGGCCTTcg > 2:115695/1‑150 (MQ=255) ttGAGGTTGGCCCAGATGGCGTCGTAGTCCACCACCAGCGGCGGCGCATTCCTGTCGACGTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCC‑‑CGCAGCCGGC‑GCGTCGGCCAGCAGCTTGTTCAGGCCTTcg > 1:679180/1‑150 (MQ=255) ggCCCAGATGGCGTCGTAGTCCACCACCAGCGGCGGCGCATTCCTGTCGACGTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCCGACGC‑GCCGGC‑T‑GCGggccagcagcaaaaacggggtgaag < 2:101876‑M2/142‑26 (MQ=255) ggCCCAGATGGCGTCGTAGTCCACCACCAGCGGCGGCGCATTCCTGTCGACGTTCTGCGGCCCGGGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCCGACGC‑GCCGGCTGCG‑gccagcagcaaaaacggggtgaag > 1:101876‑M2/1‑118 (MQ=255) tGGCGTCGTAGTCCACCACCAGCGGCGGCGCATTCCTGTCGACGTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCC‑‑CGCAGCCGGC‑GCGTCGGCCAGCAGCTTGTTCAGGCCTTCGCGGTACCACTCATAgg < 2:462303/150‑1 (MQ=255) gtcgtAGTCCACCACCAGCGGCGGCGCATTCCTGTCGACGTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCCgacgcgccggctgcgggccagca < 2:453815‑M1/113‑24 (MQ=255) gtcgtAGTCCACCACCAGCGGCGGCGCATTCCTGTCGACGTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCCgacgcgccggctgcgggccagca > 1:453815‑M1/1‑90 (MQ=255) tCCACCACCAGCGGCGGCGCATTCCTGTCGACGTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCCgacgcgccggctgcgggccagca > 1:180198‑M1/1‑83 (MQ=255) tCCACCACCAGCGGCGGCGCATTCCTGTCGACGTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCCgacgcgccggctgcgggccagca < 2:180198‑M1/106‑24 (MQ=255) caccaccaGCGGCGGCGCATTCCTGTCGACGTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCC‑‑CGCAGCCGgc > 1:365313/1‑91 (MQ=255) caccaccaGCGGCGGCGCATTCCTGTCGACGTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCC‑‑CGCAGCCGgc < 2:365313/91‑1 (MQ=255) caccaccaGCGGCGGCGCATTCCTGTCGACGTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCC‑‑CGCAGCCGGC‑GCGTCGGCCAGCAGCTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCAGAACAGccc > 2:295666/1‑150 (MQ=255) caccaccaGCGGCGGCGCATTCCTGTCGACGTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCC‑‑CGCAGCCGGC‑GCGTCGGCCAGCAGCTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCAGAACAGccc > 2:319935/1‑150 (MQ=255) accaccaGCGGCGGCGCATTCCTGTCGACGTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCC‑‑CGCAGCCGGC‑GCGTCGGCCAGCAGCTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCAGAACAGCCCg > 1:424739/1‑150 (MQ=255) aGCGGCGGCGCATTCCTGCCGACGTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCC‑‑CGCAGCCGGC‑GCGTCGGCCAGCAGCTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCAGAACAGCCCGGTCAgg < 1:66871/150‑1 (MQ=255) cggcggcgCATTCCTGTCGACGTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCC‑‑CCCAGCCGGC‑GCGTCGGCCAGCAGCTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCAGACCAGCCCGGTCAGGGc < 1:301496/150‑1 (MQ=255) ggcggcgCATTCCTGTCGACGTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCC‑‑CGCAGCCGGC‑GCGTCGGCCAGCAGCTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCAGAACAGCCCGGTCAGGGCg < 1:291238/150‑1 (MQ=255) cgcATTCCTGTCGACGTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCCgacgcgccggctgcgggccagca > 2:842666‑M1/1‑66 (MQ=255) cgcATTCCTGTCGACGTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCCgacgcgccggctgcgggccagca < 1:842666‑M1/89‑24 (MQ=255) cTGTCGACGTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCC‑‑CGCAGCCGGC‑GCGTCGGCCAGCAGCTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCAGAACAGCCCGGTCAGGGCGAACAGAAGATAg > 1:590343/1‑150 (MQ=255) tCGACGTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTGTTTGCTGCTGGCC‑‑CGCAGCCGGC‑GCGTCGGCCAGCAGCTTGGTCAGGCCTTCGCGGTACCACTCATAGGACCAGAACAGCCCGGTCAGGGCGAACAGAAGATAGAAc > 1:707316/1‑150 (MQ=255) aCGTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCC‑‑CGCAGCCGGC‑GCGTCGGCCAGCAGCTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCAGAACAGCCCGGTCAGGGCGAACAGAAGATAGAAcagc > 2:161745/1‑150 (MQ=255) gCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCC‑‑CGCAGCCGGC‑GCGTCGGCCAGCAGCTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCAGAACAGCCCGGTCAGGGCGAACAGAAGATAGAACAGCAGGCACCAGGTGCCgg < 2:590343/150‑1 (MQ=255) cGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCC‑‑CGCAGCCGGC‑GCGTCGGCCAGCAGCTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCa > 1:788738/1‑95 (MQ=255) cGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCC‑‑CGCAGCCGGC‑GCGTCGGCCAGCAGCTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCa < 2:788738/95‑1 (MQ=255) ggCCACGGCCTTCACCCCGTTTTTGCTGCTGGCC‑‑CGCAGCCGGC‑GCGTCGGCCAGCAGCTTGTTCAGGCCTTCGCTCTACCACTCATAGTACCATAACAGCCCGGTCAGGGCGAACAGAAGATAGAACAGCAGGCACCAGGTGCCGGCaa < 1:319935/150‑1 (MQ=255) cTTCACCCCGTTTTTGCTGCTGGCCcgcagccggcgcgtcggccagcagcaaaaacggggtgaaggccgtggccggcccgggccgcagaacgtcgacaggaatgcgccgccgctggtggtggactacgacgccatctgggcc > 1:101876‑M1/1‑25 (MQ=255) cTTCACCCCGTTTTTGCTGCTGGCCcgcagccggcgcgtcggccagcagcaaaaacggggtgaaggccgtggccggcacgggccgcagaacgtcgacaggaatgcgccgccgctggtggtggactacgacgccatctgggcc < 2:101876‑M1/142‑118 (MQ=255) cTTCACCCCGTTTTTGCTGCTGGCC‑‑CGCAGCCGGC‑GCGTCGGCCAGCAGCTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCAGAACAGCCCGGTCAGGGCGAACAGAAGATAGAACAGCAGGCACCAGGTGCCGGCAACGGCGTGCa < 2:679180/150‑1 (MQ=255) cTTCACCCCGTTTTTGCTGCTGGCC‑‑CGCAGCCGGC‑GCGTCGGCCAGCAGCTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCAGAACAGCCCGGTCAGGGCGAACAGAAGATAGAACAGCAGGCACCAGGTGCCGGCAACGGCGTGCa < 1:181793/150‑1 (MQ=255) ccccGTTTTTGCTGCTGGCC‑‑CGCAGCCGGC‑GCGTCGGCCAGCAGCTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCAGAACAGCCCGGTCAGGGCGAACAGAAGATAGAACAGCAGGCACCAGGTGCCGGCAACGGCGTGCAGGTcc < 1:295666/150‑1 (MQ=255) cccGTTTTTGCTGCTGGCC‑‑CGCAGCCGTC‑GCGTCGGCCAGCAGCTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCAGAACAGccc > 1:137408/1‑88 (MQ=255) cccGTTTTTGCTGCTGGCC‑‑CGCAGCCGTC‑GCGTCGGCCAGCAGCTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCAGAACAGccc < 2:137408/88‑1 (MQ=255) cccGTTTTTGCTGCTGGCC‑‑CGCAGCCGGC‑GCGTCGGCCAGCAGCTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCAGAACAGCCCGGTCAGGGCGAACAGAAGATAGAACAGCAGGCACCAGGTGCCGGCAACGGCGTGCAGGTccc > 1:721348/1‑150 (MQ=255) tttGCTGCTGGCC‑‑CGCAGCCGGC‑GCGTCggccagcagcaaaaacggggtgaaggccgtggccggcacgggccgcagaacgtcgacaggaatgcgccgccgctggtggtggactacgacgccatctgggccaacctcaaggacgccgcggg < 1:410345‑M2/150‑123 (MQ=255) tttGCTGCTGGCC‑‑CGCAGCCGGC‑GCGTCGGCCAGCAGCTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCAGAACAGCCCGGTCAGGGCGAACAGAAGATAGAACAGCAGGCACCAGGTGCCGGCAACGGCGTGCAGGTCCCAGTTGa < 1:115695/150‑1 (MQ=255) tgctgGCC‑‑CGCAGCCGGC‑GCGTCggccagcagcaaaaacggggtgaaggccgtggccggcacgggccgcagaacgtcgacaggaatgcgccgccgctggtggtggactacgac > 1:453815‑M2/1‑23 (MQ=255) tgctgGCC‑‑CGCAGCCGGC‑GCGTCggccagcagcaaaaacggggtgaaggccgtggccggcacgggccgcagaacgtcgacaggaatgcgccgccgctggtggtggactacgac < 2:453815‑M2/113‑91 (MQ=255) tgctgGCC‑‑CGCAGCCGGC‑GCGTCggccagcagcaaaaacggggtgaaggccgtggccggcacgggccgcagaacgtcgacaggaatgcgccgccgctggtggtgga < 2:180198‑M2/106‑84 (MQ=255) tgctgGCC‑‑CGCAGCCGGC‑GCGTCggccagcagcaaaaacggggtgaaggccgtggccggcacgggccgcagaacgtcgacaggaatgcgccgccgctggtggtgga > 1:180198‑M2/1‑23 (MQ=255) tgctgGCC‑‑CGCAGCCGGC‑GCGTCggccagcagcaaaaacggggtgaaggccgtggccggcacgggccgcagaacgtcgacaggaatgcg < 1:842666‑M2/89‑67 (MQ=255) tgctgGCC‑‑CGCAGCCGGC‑GCGTCggccagcagcaaaaacggggtgaaggccgtggccggcacgggccgcagaacgtcgacaggaatgcg > 2:842666‑M2/1‑23 (MQ=255) tgctgGCC‑‑CGCAGCCGGC‑GCGTCGGCCAGCAGCTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCAGAACAGCCCGGTCAGGGCGAACAGAAGAGAGAACAGCAGGCACCGGGTGCCGGCAACGGCGTGCAGGTGCCAGTGGAAGgcg > 1:272141/1‑150 (MQ=255) gCC‑‑CGCAGCCGGC‑GCGTCGGCCAGCAGCTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCAGAACAGCCCGGTCAGGGCGAACAGAAGATAGAAcagc < 2:496874/100‑1 (MQ=255) gCC‑‑CGCAGCCGGC‑GCGTCGGCCAGCAGCTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCAGAACAGCCCGGTCAGGGCGAACAGAAGATAGAAcagc > 1:496874/1‑100 (MQ=255) cc‑‑cGCTGCCGGC‑GCGTCGGCCAGCAGCTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCAGAACAGCCCGGTCAGGGCGAACAGAAGATAGAACAGCAGGCACCAGGTGCCGGCAACGGCGTGCAGGTCCCAGTTGAAGGCGCGGCCt < 2:98827/150‑1 (MQ=255) cc‑‑cGCAGCCGGC‑GCGTCGGCCAGCAGCTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCAGAAc < 2:308096/66‑1 (MQ=255) cc‑‑cGCAGCCGGC‑GCGTCGGCCAGCAGCTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCAGAAc > 1:308096/1‑66 (MQ=255) c‑‑cGCAGCCGGC‑GCGTCGGCCAGCAGCTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCAGAACAGCCCGGTCAGGGCGAACAGAAGATAGAACAGCAGGCACCAGGTACCGGCAACGGCGTGCAGGTCCCAGTTGAAGGCGCGGCCtt > 2:92197/1‑150 (MQ=255) | GCAGGTTGTAGGTGGACAGGCCTGGGCCCGCGGCGTCCTTGAGGTTGGCCCAGATGGCGTCGTAGTCCACCACCAGCGGCGGCGCATTCCTGTCGACGTTCTGCGGCCCGTGCCGGCCACGGCCTTCACCCCGTTTTTGCTGCTGGCC‑‑CGCAGCCGGC‑GCGTCGGCCAGCAGCTTGTTCAGGCCTTCGCGGTACCACTCATAGGACCAGAACAGCCCGGTCAGGGCGAACAGAAGATAGAACAGCAGGCACCAGGTGCCGGCAACGGCGTGCAGGTCCCAGTTGAAGGCGCGGCCTT > NC_002947/996773‑997069 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |