| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1138550 | 34 (1.070) | 5 (0.180) | 5/220 | NT | 12.6% | intergenic (‑75/+90) | arcC/arcB | carbamate kinase/ornithine carbamoyltransferase |
| ? | NC_002947 | = 1138611 | 39 (1.390) | intergenic (‑136/+29) | arcC/arcB | carbamate kinase/ornithine carbamoyltransferase | |||||
GGATATTGGCGCGCTGGTTGTCAGCGGTCATGGGCTCGCCGCGACGAAGCAGGGCGTTGCCGCCCAATGCAACAACGATACGCATGTGGAATGTCCTTTAGCGAAAGAATGAATGGACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1138391‑1138550‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgtgggagcgggcGTGCCCGCGAAGGCGTCAGCCGCATCATCGATGATGTCAGGTCTGGCCTCTTCGCGGGCATGCCCGCTCCCACAGCGAACTCCGCAGCTTCCGTGCAGCGACAGTCCATTCATTCTTTCGCTAAAGGACATTCCACATGC < NC_002947/1138611‑1138472 GGATATTGGCGCGCTGGTTGTCAGCGGTCATGGGCTCGCCGCGACGAAGCAGGGCGTTGCCGCCCAATGCAACAACGATACGCATGTGGAATGTCCTTTAGCGAAAGAATGAATGGACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGT < 1:482037/150‑1 GATATTGGCGCGCTGGTTGTCAGCGGTCATGGGCTCGCCGCGACGAAGCAGGGCGTTGCCGCCCAATGCAACAACGATACGCATGTGGAATGTCCTTTAGCGAAAGAATGAATGGACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTG < 2:666865/150‑1 GCGCTGGTTGTCAGCGGTCATGGGCTCGCCGCGACGAAGCAGGGCGTTGCCGCCCAATGCAACAACGATACGCATGTGGAATGTCCTTTAGCGAAAGAATGAATGGACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGC > 2:418039/1‑150 CTGGTTGTCAGCGGTCATGGGCTCGCCGCGACGAAGCAGGGCGTTGCCGCCCAATGCAACAACGATACGCATGTGGAATGTCCTTTAGCGAAAGAATGAATGGACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTG > 2:774018/1‑138 CTGGTTGTCAGCGGTCATGGGCTCGCCGCGACGAAGCAGGGCGTTGCCGCCCAATGCAACAACGATACGCATGTGGAATGTCCTTTAGCGAAAGAATGAATGGACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTG < 1:774018/138‑1 GGCGTTGCCGCCCAATGCAACAACGATACGCATGTGGAATGTCCTTTAGCGAAAGAATGAATGGACTGTCGCTGCACGGAAGCTGCGGAGTTCCCTGTGGGAGCGGGCGTGCCCGCGAAGGCGTCAGCCGCATCATCGATGATGTCAGGT > 2:479349/1‑150 TGCAACAACGATACGCATGTGGAATGTCCTTTAGCGAAAGAATGAATGGACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCGTGCCCGCGAAGGCGTCAGCCGCATCATCGATGATGTCAGGTCTGGCCTCTTCGCGG > 1:370446/1‑150 GCAACAACGATACGCATGTGGAATGTCCTTTAGCGAAAGAATGAATGGACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCGTGCCCGCGAAGGCGTCAGCCGCATCATCGATGATGTCAGGTCTGGCCTCTTCGCGGG < 1:97388/150‑1 AACGATACGCATGTGGAATGTCCTTTAGCGAAAGAATGAATGGACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCGTGCCCGCGAAGGCGTCAGCCGCATCATCGATGATGTCAGGTCTGGCCTCTTCGCGGGCATGC < 2:370446/150‑1 ACGATACGCATGTGGAATGTCCTTTAGCGAAAGAATGAATGGACTGTCGCTGCACGGAAGCTGCGGAGTTCCCTGTGGGAGCGGGCGTGCCCGCGAAGGCGTCAGCCGCATCATCGATGATGTCAGGTCTGGCCTCTTCGCGGGCATGCC < 1:479349/150‑1 CTGTGGGAGCGGGCGTGCCCGCGAAGGCGTCAGCCGCATCATCGATGATGTCAGGTCTGGCCTCTTCGCGGGCATGCCCGCTCCCACAGCGAACTCCGCAGCTTCCGTGCAGCGACAGTCCATTCATTCTTTCGCTAAAGGACATTCCAC > 2:804643/1‑150 TGTGGGAGCGGGCGTGCCCGCGAAGGCGTCAGCCGCATCATCGATGATGTCAGGTCTGGCCTCTTCGCGGGCATGCCCGCTCCCACAGCGAACTCCGCAGCTTCCGTGCAGCGACAGTCCATTCATTCTTTCGCTAAAGGACATTCCACA < 2:387242/150‑1 TGTGGGAGCGGGCGTGCCCGCGAAGGCGTCAGCCGCATCATCGATGATGTCAGGTCTGGCCTCTTCGCGGGCATGCCCGCTCCCACAGCGAACTCCGCAGCTTCCGTGCAGCGACAGTCCATTCATTCTTTCGCTAAAGGACATTCCACA < 2:683164/150‑1 TGTGGGAGCGGGCGTGCCCGCGAAGGCGTCAGCCGCATCATCGATGATGTCAGGTCTGGCCTCTTCGCGGGCATGCCCGCTCCCACAGCGAACTCCGCAGCTTCCGTGCAGCGACAGTCCATTCATTCTTTCGCTAAAGGACATTCCACA > 1:387242/1‑150 GGGAGCGGGCGTGCCCGCTAAGGCGTGAGCCGCATCATCGTTGATGTCAGGTCTGGCCTCTTCGCGGCCATGCCCGCTCCCACAGCGAACTCCGCAGCGTCCTTGCAGCGACAGTCCATTCATTCTTTCGCTAAAGGACATTCCACATGC < 1:75359/150‑1 GGGAGCGGGCGTGCCCGCGAAGCCGTCAGCCGCATCATCGATGATGTCAGGTCTGGCCTCTTCGCGGGCATGCCCGCTCCCACAGCGAACTCCGCAGCTTCCGTGCAGCGACAGTCCATTCATTCTTTCGCTAAAGGACATTCCACATGC < 1:282658/150‑1 GGCGTGCCCGCGAAGGCGTCAGCCGCATCATCGATGATGTCAGGTCTGGCCTCTTCGCGGGCATGCCCGCTCCCACAGCGAACTCCGCAGCTTCCGTGCAGCGACAGTCCATTCATTCTTTCGCTAAAGGACATTCCACAT < 1:484994/141‑1 GGCGTGCCCGCGAAGGCGTCAGCCGCATCATCGATGATGTCAGGTCTGGCCTCTTCGCGGGCATGCCCGCTCCCACAGCGAACTCCGCAGCTTCCGTGCAGCGACAGTCCATTCATTCTTTCGCTAAAGGACATTCCACAT > 2:484994/1‑141 GGATATTGGCGCGCTGGTTGTCAGCGGTCATGGGCTCGCCGCGACGAAGCAGGGCGTTGCCGCCCAATGCAACAACGATACGCATGTGGAATGTCCTTTAGCGAAAGAATGAATGGACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1138391‑1138550‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgtgggagcgggcGTGCCCGCGAAGGCGTCAGCCGCATCATCGATGATGTCAGGTCTGGCCTCTTCGCGGGCATGCCCGCTCCCACAGCGAACTCCGCAGCTTCCGTGCAGCGACAGTCCATTCATTCTTTCGCTAAAGGACATTCCACATGC < NC_002947/1138611‑1138472 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |