New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1138550	34 (1.070)	5 (0.180)	5/220	NT	12.6%	intergenic (‑75/+90)	arcC/arcB	carbamate kinase/ornithine carbamoyltransferase
	?	NC_002947	= 1138611	39 (1.390)					intergenic (‑136/+29)	arcC/arcB	carbamate kinase/ornithine carbamoyltransferase

ACAACGATACGCATGTGGAATGTCCTTTAGCGAAAGAATGAATGGACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGCCTGCTCGAAGGCGATGCACGCTGGCGACTCGAACACGTCATCGGTCACTTCGATGCCGTTG  >  NC_002947/1138462‑1138760                                                                                                                                                      |                                                                                                                                                      acaacGATACGCATGTGGAATGTCCTTTAGCGAAAGAATGAATGGACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCCGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCAc                                                                                                                                                       >  1:586022/1‑150 (MQ=255)           gCATGTGGAATGTCCTTTAGCGAAAGAATGAATGGACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGGCTTCGCGGGCACgcccgctccc                                                                                                                                             <  1:282658‑M2/150‑11 (MQ=255)           gCATGTGGAATGTCCTTTAGCGAAAGAATGAATGGACTGTCGCTGCAAGGACGCTGCGGAGTTCGCTGTGGGAGCGGGCATGGCCGCGAAGAGGCCAGACCTGACATCAACGATGATGCGGCTCACGCCTTAGCGGGCACgcccgctccc                                                                                                                                             <  1:75359‑M2/150‑11 (MQ=255)             aTGTGGAATGTCCTTTAGCGAAAGAATGAATGGACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACgcc                                                                                                                                                    >  2:484994‑M2/1‑138 (MQ=255)             aTGTGGAATGTCCTTTAGCGAAAGAATGAATGGACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACgcc                                                                                                                                                    <  1:484994‑M2/141‑4 (MQ=255)              tgtgGAATGTCCTTTAGCGAAAGAATGAATGGACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACgcccgctcccaca                                                                                                                                          <  2:683164‑M2/150‑14 (MQ=255)              tgtgGAATGTCCTTTAGCGAAAGAATGAATGGACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACgcccgctcccaca                                                                                                                                          <  2:387242‑M2/150‑14 (MQ=255)              tgtgGAATGTCCTTTAGCGAAAGAATGAATGGACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACgcccgctcccaca                                                                                                                                          >  1:387242‑M2/1‑137 (MQ=255)               gtgGAATGTCCTTTAGCGAAAGAATGAATGGACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACgcccgctcccacag                                                                                                                                         >  2:804643‑M2/1‑136 (MQ=255)                   aaTGTCCTTTAGCGAAAGAATGAATGGACTGTCGATCCAAGGAAGCTCCGGAGTTAACTGTGGGAGCGGGCAGGCCCGGGAAGAGGCGAGACCGTACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGAc                                                                                                                                     >  2:97639/1‑150 (MQ=255)                        ccTTTAGCGAAAGAATGAATGGACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCgg                                                                                                                                >  2:388686/1‑150 (MQ=255)                         cTTTAGCGAAAGAATGAATGGAATGTCGCTGCACGGCAGCTGCGGAGGTCGCTGTGGGAGCGGGCATGCACGAGAAAAGGCCAGACCCGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGACCGCTCCCACAGGGACTACggg                                                                                                                               >  2:31476/1‑150 (MQ=255)                                 aaaGAATGAATGGACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTtat                                                                                                                       >  1:175961/1‑150 (MQ=255)                                   aGAATGAATGGACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAg                                                                                                                     >  2:16809/1‑150 (MQ=255)                                       tgaatgGACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCa                                                                                                                 >  1:849624/1‑150 (MQ=255)                                       tgaatgGACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCa                                                                                                                 <  2:623586/150‑1 (MQ=255)                                         aatgGACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGc                                                                                                               >  1:320907/1‑150 (MQ=255)                                          atgGACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGcc                                                                                                              >  2:647740/1‑150 (MQ=255)                                            ggACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCCGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCat                                                                                                            <  2:586022/150‑2 (MQ=255)                                             gACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAgg                                                                                                           <  1:683164/150‑1 (MQ=255)                                                tGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTc                                                                                                        <  2:240898/150‑1 (MQ=255)                                                                 tGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCtt                                                                                       <  2:87583/150‑1 (MQ=255)                                                                 tGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCtt                                                                                       <  2:818900/150‑1 (MQ=255)                                                                        tgcGCTGGGGGGGCGGGCATGCCCGCGAAGAGGCCAGACCTGAAATCATCGATGATGCGGCTGACGCCTTAGCGGGCACGCCCGCTCTCACAGGGACTGCGTGCCACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCgtg                                                                                <  2:75359/148‑1 (MQ=255)                                                                               tgGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGTGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGc                                                                         >  2:359647/1‑150 (MQ=255)                                                                                 ggAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCgg                                                                       <  1:388686/150‑1 (MQ=255)                                                                                  gAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGt                                                                      <  2:489210/150‑1 (MQ=255)                                                                                       ggCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACgcccgctcccacagggaactccgcagcttccgtgcagcgacagtccattcattctttcgctaaaggacattccacatgcgtatcgt                                                                 <  1:479349‑M2/150‑87 (MQ=255)                                                                                       ggCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTcc                                                                 >  1:799726/1‑150 (MQ=255)                                                                                        gCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACgcccgctcccacagcgaactccgcagcttccgtgcagcgacagtccattcattctttcgctaaaggacattccacatgcgtatcgtt                                                                <  2:370446‑M2/150‑88 (MQ=255)                                                                                         cATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGc                                                               <  2:175961/150‑1 (MQ=255)                                                                                             cccGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACgcccgctcccacagcgaactccgcagcttccgtgcagcgacagtccattcattctttcgctaaaggacattccacatgcgtatcgttgttgc                                                           <  1:97388‑M2/150‑93 (MQ=255)                                                                                              ccGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACgcccgctcccacagcgaactccgcagcttccgtgcagcgacagtccattcattctttcgctaaaggacattccacatgcgtatcgttgttgca                                                          >  1:370446‑M2/1‑57 (MQ=255)                                                                                                  gAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGCCTGCTCGaa                                                      <  2:799726/150‑1 (MQ=255)                                                                                                  gAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTGCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGCCTGCTCGaa                                                      <  1:418039/150‑1 (MQ=255)                                                                                                   aaGAGGCCAGACCTGACATCATCGATGATGCGGCTGCCGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGCCTGCTCGAAg                                                     <  1:685228/150‑1 (MQ=255)                                                                                                       ggCCAGACCTGCCATCATCGAGGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGATACTTATTCATCCGACAGCGCCAGCAGCATGACCTACGTCTGCGTGTGCGTGCGGTTTTCCGCCTGCTCGAAGGCGa                                                 <  1:16809/150‑1 (MQ=255)                                                                                                        gCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGc                                                               >  1:264250/1‑135 (MQ=255)                                                                                                        gCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGc                                                               <  2:264250/135‑1 (MQ=255)                                                                                                             aCCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACgcccgctcccacagggaactccgcagcttccgtgcagcgacagtccattcattctttcgctaaaggacattccacatgcgtatcgttgttgcattgggcggcaacgcc                                           >  2:479349‑M2/1‑42 (MQ=255)                                                                                                             aCCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAgg                                                                                                           >  1:227334/1‑86 (MQ=255)                                                                                                             aCCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAgg                                                                                                           <  2:227334/86‑1 (MQ=255)                                                                                                                 gACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGCCTGCTCGAAGGCGATGCACGCTgg                                       <  2:849624/150‑1 (MQ=255)                                                                                                                           atgatgCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGCCTGCTCGAAGGCGATGCACGCTGGCGACTCGAac                             <  1:97639/150‑1 (MQ=255)                                                                                                                             gatgCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGCCTGCTCGAAGGCGATGCACGCTGGCGACTCGAacac                           >  2:330606/1‑150 (MQ=255)                                                                                                                                 cGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGCCTGCTCGAAGGCGATGCACGCTGGCGACTCGAACACGTCa                       <  1:647740/150‑1 (MQ=255)                                                                                                                                     tGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGCCTGCTCGAAGGCGATGCACGCTg                                        <  2:235363/129‑1 (MQ=255)                                                                                                                                     tGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGCCTGCTCGAAGGCGATGCACGCTg                                        >  1:235363/1‑129 (MQ=255)                                                                                                                                         gCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGCCTGCTCGAAGGCGATGCACGCTGGCGACTCGAACACGTCATCGGTCAc               >  2:370548/1‑150 (MQ=255)                                                                                                                                         gCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCATTGATCGTGTGCATGCGGTTTTCCGACTGCTCGAAGGCGATGCACGCTGGCGACTCGAACACGTCATCGGTCAc               <  1:330606/150‑1 (MQ=255)                                                                                                                                          tcTTCGCGGGCATGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCgtgt                                                                               >  2:652922/2‑85 (MQ=255)                                                                                                                                          tcTTCGCGGGCATGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCgtgt                                                                               <  1:652922/84‑1 (MQ=255)                                                                                                                                           cTTCGGGGTCACGCCCGCGCCCACAGGGACGGCGGGCTACTTATAGCTCAGCCAGCGACGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGCCTGCTCGAAGGCGATGCACGCTGGCGACTCGAACACGTCATCGGTCACtt             >  2:228987/1‑150 (MQ=255)                                                                                                                                            ttCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGCCTGCTCGAAGGCGATGCACGCTGGCGACTCGAACACGTCATCGGTCACTTc            >  1:549124/1‑150 (MQ=255)                                                                                                                                                  ggCACGCCCGCTCCCACAGGGCATGCGGGCTACTTGTGGATCAGCCAGGGTCGATACCAGGATCGCCTCGATCGTGTGCATGCGGTTTTCCGCCTGCTCGAAGGCGATGCACGCTGGCGACTCGAACACGTCATCGGTCACTTCGATGcc      <  2:733635/150‑1 (MQ=255)                                                                                                                                                     aCGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATACGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGCCTGCTCGAAGGCGATGCACGCTGGCGACTCGAACACGTCATCGGTCACTTCGATGCCGtt   >  2:458221/1‑150 (MQ=255)                                                                                                                                                      cGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGCCTGCTCGAAGGCGATGCACGCTGGCGACTCGAACACGTCATCGGTCACTTCGATGCCGTTg  <  2:320907/150‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                      ACAACGATACGCATGTGGAATGTCCTTTAGCGAAAGAATGAATGGACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGATCGCCTTGATCGTGTGCATGCGGTTTTCCGCCTGCTCGAAGGCGATGCACGCTGGCGACTCGAACACGTCATCGGTCACTTCGATGCCGTTG  >  NC_002947/1138462‑1138760

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.