New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1352457 = | 18 (0.570) | 4 (0.130) | 3/234 | NT | 16.0% | intergenic (‑94/+46) | PP_1178/nrdA | hypothetical protein/ribonucleoside‑diphosphate reductase subunit alpha |
? | NC_002947 | 1352497 = | 25 (0.840) | intergenic (‑134/+6) | PP_1178/nrdA | hypothetical protein/ribonucleoside‑diphosphate reductase subunit alpha |
AACGCCGTTTCCAGCGGTGGCGACAGCGCCCCAGTCCAGGCAGCCGGCCCTGCGCCAGTGCCAAAGGCCTGCGCGATCGACGAGCCTGACTGCGAAGCCTGCCAGTAAGGCCTGAATGCCGTGCGGGGTGCCTACGGGTGCCCCGCGCGGCATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1352610‑1352457 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcattCAGGCCTTACTGGCAGGCTTCGCAGTCAGGCTCGTCGATCGCGCAGGCCTTTGGCACTGGCGCAGGGCCGGCTGCCTGGACTGGGGCGCTGTCGCCACCGCTGGAAACGGCGTTGAGCTTGCCGGTGTTGATGGTCGACTTCTCG > NC_002947/1352497‑1352641 AACGCCGTTTCCAGCGGTGGCGACAGCGCCCCAGTCCAGGCAGCCGGCCCTGCGCCAGTGCCAAAGGCCTGCGCGATCGACGAGCCTGACTGCGAAGCCTGCCAGTAAGGCCTGAATGCCGCGCGGGGTGCCTACGGGTGCCCCGCGCGG > 2:126291/1‑150 CCTGAATGCCGTGCGGGGTGCCTACGGGTGCCCCGCGCGGCATTCAGGCCTTACTGGCAGGCTTCGCAGTCAGGCTCGTCGATCGCGCAGGCCTTTGGCACTGGCGCAGGGCCGGCTGCCTGGACTGGGGCGCTGTCGCCACCGCTGGAA > 1:831564/1‑150 CGTGCGGGGTGCCTACGGGTGCCCCGCGCGGCATTTAGGCCTTACTGGCAGGCTTCGCAGTCAGGCTCGTCGATCGCGCAGGCCTTTGGCACTGGCGCAGGGCCGGCTGCCTGGACTGGGGCGCTGTCGCCACCGCTGGAAACGGCGTTG > 1:553670/1‑150 CGTGCGGGGTGCCTACGGGTGCCCCGCGCGGCATTCAGGCCTTACTGGCAGGCTTCGCAGTCAGGCTCGTCGATCGCGCAGGCCTTTGGCACTG < 1:97225/94‑1 CGTGCGGGGTGCCTACGGGTGCCCCGCGCGGCATTCAGGCCTTACTGGCAGGCTTCGCAGTCAGGCTCGTCGATCGCGCAGGCCTTTGGCACTG > 2:97225/1‑94 GCATTCAGGCCTTACTGGCAGGCTTCGCAGTCAGGCTCGTCGATCGCGCAGGCCTTTGGCACTGGCGCAGGGCCGGCTGCCTGGACTGGGGCGCTGTCGCCACCGCTGGAAACGGCGTTGAGCTTGCCGGTGTTGATGGTCGACTTCTCG < 1:522029/150‑1 AACGCCGTTTCCAGCGGTGGCGACAGCGCCCCAGTCCAGGCAGCCGGCCCTGCGCCAGTGCCAAAGGCCTGCGCGATCGACGAGCCTGACTGCGAAGCCTGCCAGTAAGGCCTGAATGCCGTGCGGGGTGCCTACGGGTGCCCCGCGCGGCATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1352610‑1352457 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcattCAGGCCTTACTGGCAGGCTTCGCAGTCAGGCTCGTCGATCGCGCAGGCCTTTGGCACTGGCGCAGGGCCGGCTGCCTGGACTGGGGCGCTGTCGCCACCGCTGGAAACGGCGTTGAGCTTGCCGGTGTTGATGGTCGACTTCTCG > NC_002947/1352497‑1352641 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |