New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1377535 =	39 (1.230)	4 (0.130)	4/236	NT	10.0%	coding (104/1293 nt)	PP_1201	hypothetical protein
	?	NC_002947	1377557 =	35 (1.160)					coding (82/1293 nt)	PP_1201	hypothetical protein

GACACCGCCGCCCTGATTGCAGGCGGCCTGACTGGATTGGTGAAACGCTGATGACCCGACGCTTTTTGTTGTACCTGCTGGTTCCCCTGCTGCTGGCCGCCCTGGGTGGTGCGCTGGCCTTCTGGCTGTGGACGCGCC‑CGGCCCCCGAGGCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1377688‑1377535 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcgTCCACAGCCAGAAGGCCAGCGCACCACCCAGGGCGGCCAGCAGCAGGGGAACCAGCAGGTACAACAAAAAGCGTCGGGTCATCAGCGTTTCACCAATCCAGTCAGGCCGCCTGCAATCAGGGCGGCGGTGTCGGCCAGTGCCAC  >  NC_002947/1377557‑1377700                                                                                                                                                                                                                                                                                                             GACACCGCCGCCCTGATTGCAGGCGGCCTGACTGGATTGGTGAAACGCTGATGACCCGACGCTTTTTGTTGTACCTGCTGGTTCCCCTGCTGCTGGCCGCCCTGGGTGGTGCGCTGGCCTTCTGGCTGTGGACGCGCC‑CGGCCCCCGAGG                                                                                                                                                      <  1:171382/150‑1                                                  GATGACCCGACGCTTTTTGTTGTACCTGCTGGTTCCCCTGCTGCTGGCCGCCCTGGGTGGTGCGCTGGCCTTCTGGCTGTGGACGCGCCTCGGGGGCCG‑GGCGCGTCCACAGCCAGAA                                                                                                                                     >  1:696970/1‑118                                                  GATGACCCGACGCTTTTTGTTGTACCTGCTGGTTCCCCTGCTGCTGGCCGCCCTGGGTGGTGCGCTGGCCTTCTGGCTGTGGACGCGCCTCGGGGGCCG‑GGCGCGTCCACAGCCAGAA                                                                                                                                     <  2:696970/118‑1                                                                                                                                         CC‑CGGCCCCCGAGGCGCGTCCACAGCCAGAAGGCCA                                                                                                                                <  1:732724/36‑1                                                                                                                                         CC‑CGGCCCCCGAGGCGCGTCCACAGCCAGAAGGCCA                                                                                                                                >  2:732724/1‑36                                                                                                                                                      GGCGCGTCCACAGCCAGAAGGCCAGCGCACCACCCAGGGCGGCCAGCAGCAGGGGAACCAGCAGGTACAACAAAAAGCGTCGGGTCATCAGCGTTTCACCAATCCAGTCAGGCCGCCTGCAATCAGGGCGGCGGTGTCGGCCAGTGCCAC  <  1:55541/150‑1                                                                                                                                                                                                                                                                                                             GACACCGCCGCCCTGATTGCAGGCGGCCTGACTGGATTGGTGAAACGCTGATGACCCGACGCTTTTTGTTGTACCTGCTGGTTCCCCTGCTGCTGGCCGCCCTGGGTGGTGCGCTGGCCTTCTGGCTGTGGACGCGCC‑CGGCCCCCGAGGCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1377688‑1377535 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcgTCCACAGCCAGAAGGCCAGCGCACCACCCAGGGCGGCCAGCAGCAGGGGAACCAGCAGGTACAACAAAAAGCGTCGGGTCATCAGCGTTTCACCAATCCAGTCAGGCCGCCTGCAATCAGGGCGGCGGTGTCGGCCAGTGCCAC  >  NC_002947/1377557‑1377700

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.