New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1431552	33 (1.040)	5 (0.170)	5/234	NT	13.7%	coding (327/336 nt)	PP_1253	ArsR family transcriptional regulator
	?	NC_002947	= 1431565	32 (1.070)					coding (314/336 nt)	PP_1253	ArsR family transcriptional regulator

GTGTACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTGCCAAGCCCAGCGCAACCCTCAGGCTTATCGCCATCCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCTGCACAGGTATCACTGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1431398‑1431552 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgctggAGTGCATCCTGCGCCAGCAGTGATACC  <  NC_002947/1431565‑1431539                                                                                                                                                                                        GTGTACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTGCCAAGCCCAGCGCAACCCTCAGGCTTATCGCCATCCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCTGCACAGGTATCACT                                  >  2:704643/1‑150     ACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTGCCAAGCCCAGCGCAACCCTCAGGCTTATCGCCATCCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCTGCACAGGTATCACTGCTG                              <  1:704643/150‑1       GGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTGCCAAGCCCAGCGCAACCCTCAGGCTTATCGCCATCCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCTGCACGGGTATCACTGCTGGA                            >  2:594731/1‑150                 GCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTGCCAAGCCCAGCGCAACCCTCAGGCTTATCGCCATCCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCTGCACAGGTATCAC                                   <  1:532787/133‑1                 GCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTGCCAAGCCCAGCGCAACCCTCAGGCTTATCGCCATCCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCTGCACAGGTATCAC                                   >  2:532787/1‑133                          TGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTGCCAAGCCCAGCGCAACCCTCAGGCTTATCGCCATCCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCTGCACAGGTATCACTGCTGGAGTGCATCCTGCGCCAGCAG         <  1:594731/150‑1                                                                                                     TCCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCTGCACAGGTATCACTGCTGGAGTGCATCCTGCGCCAGCAGTGA      <  1:615273/78‑1                                                                                                     TCCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCTGCACAGGTATCACTGCTGGAGTGCATCCTGCGCCAGCAGTGA      >  2:615273/1‑78                                                                                                         TGGTAGGAGCGGGTTCACCCGCGAAGAGGCCTGCACAGGTATCACT                                  <  1:428657/46‑1                                                                                                         TGGTAGGAGCGGGTTCACCCGCGAAGAGGCCTGCACAGGTATCACT                                  >  2:428657/1‑46                                                                                                                      TTCACCCGCGAAGAGGCCTGCACAGGTATCACTGCTGGAGTGCATCCTGCTCCAGCAGTGATACC  <  2:567693/65‑1                                                                                                                      TTCACCCGCGAAGAGGCCTGCACAGGTATCACTGCTGGAGTGCATCCTGCGCCAGCAGTGATACC  >  1:567693/1‑65                                                                                                                                                                                        GTGTACGGAACCGTACGCACGGTGGTGTGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTGCCAAGCCCAGCGCAACCCTCAGGCTTATCGCCATCCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCTGCACAGGTATCACTGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1431398‑1431552 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgctggAGTGCATCCTGCGCCAGCAGTGATACC  <  NC_002947/1431565‑1431539

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.