New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1431552	33 (1.040)	5 (0.170)	5/234	NT	13.7%	coding (327/336 nt)	PP_1253	ArsR family transcriptional regulator
	?	NC_002947	= 1431565	32 (1.070)					coding (314/336 nt)	PP_1253	ArsR family transcriptional regulator

TGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTGCCAAGCCCAGCGCAACCCTCAGGCTTATCGCCATCCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCTGCACAGGTATCACTGCTGGCGCAGGATGCACTCCAGCAGCCCGGGAAACCGCTCGCCCAGCATCTCGCTACGCAGCGAATTCATATGGGTAGTCCCCACATTGCGGGTTTGCACCAGCCCTGCATCACGCAACACACGGAAGTGGTGGGACATGCTCGACTTCGGCCGACCTCCATCCAGC  >  NC_002947/1431425‑1431714                                                                                                                                             |                                                                                                                                                      tgAGAGGACGGCGGGTGTGAATCCGCCTGCTACTCGATTGCCAAGCCCAGCGCAACCCTCAGGCTTATCGCCATCCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCTGCACAGGTATCACTGCTGGCGCAGGATGCACTCCAGCAGcc                                                                                                                                              >  1:794717/1‑150 (MQ=255)     agGACGGCGGGTGTGAATCCGCCTCCTACTCGATTGCCAAGCCCAGCGCAACCCTCAGGCTTATCGCCATCCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCTGCACAGGTATCACTGCTGGCGCAGGATGCACTCCAGCAGCCCggg                                                                                                                                          <  2:600038/150‑1 (MQ=255)         cggcggGTGTGAATCCGCCTCCTACTCGATTGCCAAGCCCAGCGCAACCCTCAGGCTTATCGCCATCCCTGGTAGGAGCTGGTTCACCCGCGAAGAGGCCTGCACAGGTATCACTGCTGGCGCAGGATGCACTCCAGCAGCCCGGGAAAc                                                                                                                                      <  2:204302/150‑1 (MQ=255)               gtgtGAATCCGCCTCCTACTCGATTGCCAAGCCCAGCGCAACCCTCAGGCTTATCGCCATCCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCTGCACAGGTATCACTGCTGGCGCAGGATGCACTCCAGCAGCCCGGGAAACCGCTCg                                                                                                                                >  1:80814/1‑150 (MQ=255)                      tCCGCCTCCTACTCGATTGCCAAGCCCAGCGCAACCCTCAGGCTTATCGCCATCCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCTGCACAGGTATCACTGCTGGCGCAGGATGCACTCCAGCAGCCCGGGAAACCGCTCGCCCAGCa                                                                                                                         >  2:430608/1‑150 (MQ=255)                         gCCTCCTACTCGATTGCCAAGCCCAGCGCAACCCTCAGGCTTATCGCCATCCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCTGCACAGGTATCACTGCTGGCGCAGGATGCACTCCAGCAGCCCGGGAAACCGCTCGCCCAGCAtct                                                                                                                      <  2:344906/150‑1 (MQ=255)                                 cTCGATTGCCAAGCCCAGCGCAACCCTCAGGCTTATCGCCATCCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCTGCACAGGTATCACTGCTGGCGCAGGATGCACTCCAGCAGCCCGGGAAACCGCTCGCCCAGCATCTCGCTACGc                                                                                                              >  1:802788/1‑150 (MQ=255)                                    gATTGCCAAGCCCAGCGCAACCCTCAGGCTTATCGCCATCCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCTGCACAGGTATCACTGCTGGCGCAGGATGCACTCCAGCAGCCCGGGAAACCGCTCGCCCAGCATCTCGCTACGCAGc                                                                                                           >  2:781591/1‑150 (MQ=255)                                    gATTGCCAAGCCCAGCGCAACCCTCAGGCTTATCGCCATCCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCTGCACAGGTATCACTGCTGGCGCAGGATGCACTCCAGCAGCCCGGGAAACCGCTCGCCCAGCATCTCGCTACGCAGc                                                                                                           >  2:837324/1‑150 (MQ=255)                                       tGCCAAGCCCAGCGCAACCCTCAGGCTTATCGCCATCCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCTGCACAGGTATCACTGCTGGCGCAGGATGCACTCCAGCAGCCCGGGAAACCGCTCGCCCAGCATCTCGCTACGCAGCGaa                                                                                                        <  1:430608/150‑1 (MQ=255)                                         ccAAGCCCAGCGCAACCCTCAGGCTTATCGCCATCCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCTGCACAGGTATCACTGCTGGCGCAGGATGCACTCCAGCAGCCCGGGAAACCGCTCGCCCAGCATCTCGCTACGCAGCGAAtt                                                                                                      >  1:559991/1‑150 (MQ=255)                                         ccAAGCCCAGCGCAACCCTCAGGCTTATCGCCATCCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCTGCACAGGTATCACTGCTGGCGCAGGATGCACTCCAGCAGCCCGGGAAACCGCTCGCCCAGCATCTCGCTACGCAGCGAAtt                                                                                                      >  1:175849/1‑150 (MQ=255)                                          cAAGCCCAGCGCAACCCTCAGGCTTATCGCCATCCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCTGCACAGGTATCACTGCTGGCGCAGGATGCACTCCAGCAGCCCGGGAAACCGCTCGCCCAGCATCTCGCTACGCAGCg                                                                                                          <  2:685891/145‑1 (MQ=255)                                          cAAGCCCAGCGCAACCCTCAGGCTTATCGCCATCCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCTGCACAGGTATCACTGCTGGCGCAGGATGCACTCCAGCAGCCCGGGAAACCGCTCGCCCAGCATCTCGCTACGCAGCg                                                                                                          >  1:685891/1‑145 (MQ=255)                                                      aaCCCTCAGGCTTATCGCCATCCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCTGCACAGGTATCACTGCTGGCGCAGGATGCACTCCAGCAGccc                                                                                                                                             >  1:578148/1‑98 (MQ=255)                                                      aaCCCTCAGGCTTATCGCCATCCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCTGCACAGGTATCACTGCTGGCGCAGGATGCACTCCAGCAGccc                                                                                                                                             <  2:578148/98‑1 (MQ=255)                                                              ggCTTATCGCCATCCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCTGCACAGGTATCACTGCTGGCGCAGGATGCACTCCAGCAGCCCGGGAAACCGCTCGCCCAGCATCTCGCTACGCAGCGAATTCATATGGGTAGTCCCCACAtt                                                                                 <  1:837324/150‑1 (MQ=255)                                                                       ccttCCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCTGCACAGGTATCACTGCTGGCGCAGGATGCACTCCAGCAGCCCGGGAAACCGCTCGCCCAGCATCTCGCTACGCAGCGAATTCATATGGGTAGTCCCCACATTGCGGGTTTg                                                                        >  2:427292/4‑150 (MQ=255)                                                                       ccATCCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCTGCACAGGTATCACTGCTGGCGCAGGATGCACTCCAGCAGCCCGGGAAACCGCTCGCCCAGCATCTCGCTACGCAGCGAATTCATATGGGTAGTCCCCACATTGCGGGTTTg                                                                        >  1:681838/1‑150 (MQ=255)                                                                        cATCCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCTGCACAGGTATCACTGCTGGCGCAGGATGCACTCCAGCAGCCCGGGAAACCGCTCGCCCAGCATCTCGCTACGCAGCGAATTCATATGGGTAGTCCCCACATTGCGGGTTTGc                                                                       <  1:678181/150‑1 (MQ=255)                                                                        cATCCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCTGCACAGGTATCACTGCTGGCGCAGGATGCACTCCAGCAGCCCGGGAAACCGCTCGCCCAGCATCTCGCTACGCAGCGAATTCATATGGGTAGTCCCCACATTGCGGGTTTGc                                                                       <  2:802788/150‑1 (MQ=255)                                                                                          gTTCACCCGCGAAGAGGCCTGCACAGGTATCACTGCTGGCGCAGGATGCACTCCAGCAGCCCGGGAAACCGCTCGCCCAGCATCTCGCTACGCAGCGAATTCATATGGGTAGTCCCCACATTGCGGGTTTGCACCAGCCCTGCATCACGc                                                     <  2:681838/150‑1 (MQ=255)                                                                                           ttCACCCGCGAAGAGGCCTGCACAGGTATCACTGCTGGCGCAGGATGCACTCCAGCAGCCCGGGAAACCGCTCGCCCAGCATCTCGCTACGCAGCGAATTCATATGGGTAGTCCCCACATTGCGGGTTTGCACCCGCCCTGCATCACGCa                                                    >  1:316108/1‑150 (MQ=255)                                                                                           ttCACCCGCGAAGAGGCCTGCACAGGTATCACTGCTGGCGCAGGATGCACTCCAGCAGCCCGGGAAACCGCTCGCCCAGCATCTCGCTACGCAGCGAATTCATATGGGTAGTCCCCACATTGCGGGTTTGCACCAGCCCTGCATCACGCa                                                    >  2:99227/1‑150 (MQ=255)                                                                                                          gCCTGCACAGGTATCACTGCTGGCGCAGGATGCACTCCAGCAGCCCGGGAAACCGCTCGCCCAGCATCTCGCTACGCAGCGAATTCATATGGGTAGTCCCCACATTGCGGGTTTGCACCAGCCCTGCATCACGCAACACACGGAAgtggt                                     >  2:128138/1‑150 (MQ=255)                                                                                                            cTGCACAGGTATCACTGCTGGCGCAGGATGCACTCCAGCAGCCCGGGAAACCGCTCGCCCAGCATCTCGCTACGCAGCGAATTCATATGGGTAGTCCCCACATTGCGGGTTTGCACCAGCCCTGCATc                                                         >  2:57106/1‑128 (MQ=255)                                                                                                            cTGCACAGGTATCACTGCTGGCGCAGGATGCACTCCAGCAGCCCGGGAAACCGCTCGCCCAGCATCTCGCTACGCAGCGAATTCATATGGGTAGTCCCCACATTGCGGGTTTGCACCAGCCCTGCATc                                                         <  1:57106/128‑1 (MQ=255)                                                                                                            cTGCACAGGTATCACTGCTGGCGCAGGATGCACTCCAGCAGCCCGGGAAACCGCTCGCCCAGCATCTCGCTACGCAGCGAATTCATATGGGTAGTCCCCACATTGCGGGTTTGCACCAGCCCTGCATCACGCAACACACGGAAGtggtgg                                   >  1:114973/1‑150 (MQ=255)                                                                                                            cTGCACAGGTATCACTGCTGGCGCAGGATGCACTCCAGCAGCCCGGGAAACCGCTCGCCCAGCATCTCGCTACGCAGCGAATTCATATGGGTAGTCCCCACATTGCGGGTTTGCACCAGCCCTGCATCACGCAACACACGGAAGtggtgg                                   <  1:99227/150‑1 (MQ=255)                                                                                                                 caGGTATCACTGCTGGCGCAGGATGAACTCCAGCAGCCCGGGAAACCGCTCGCCCAGCATCTCGCTACGCAGCGAATTCATATGGGTAGTCCCCACATTGCGGGTTTGCACCAGCCCTGCATCACGCAACACACGGAAGTGGTGGGACAt                              >  2:481015/1‑150 (MQ=255)                                                                                                                   ggTATCACTGCTGGCGCAGGATGCACTccagcagtgatacctgtgcaggcctcttcgcgggtgaa                                                                                                                 >  1:567693‑M2/1‑27 (MQ=255)                                                                                                                   ggTATCACTGCTGGAGCAGGATGCACTccagcagtgatacctgtgcaggcctcttcgcgggtgaa                                                                                                                 <  2:567693‑M2/65‑39 (MQ=255)                                                                                                                      aTCACTGCTGGCGCAGGATGCACTCCAGCAGCCCGGGAAACCGCTCGCCCAGCATCTCGCTACGCAGCGAATTCATATGGGTAGTCCCCACATTGCGGGTTTGCACCAGCCCTGCATCACGCAACACACGGAAGTGGTGGGACATGCTCg                         <  2:794717/150‑1 (MQ=255)                                                                                                                       tCACTGCTGGCGCAGGATGCACTccagcagtgatacctgtgcaggcctcttcgcgggtgaacccgctcctaccaggga                                                                                                <  1:615273‑M2/78‑56 (MQ=255)                                                                                                                       tCACTGCTGGCGCAGGATGCACTccagcagtgatacctgtgcaggcctcttcgcgggtgaacccgctcctaccaggga                                                                                                >  2:615273‑M2/1‑23 (MQ=255)                                                                                                                       tCACTGCTGGCGCAGGATGCACTCCAGCAGCCCGGGAAACCGCTCGCCCAGCATCTCGCTACGCAGCGAATTCATATGGGTAGTCCCCACATTGCGGGTTTGCACCAGCCCTGCATCACACAACACACGGAAGTGGTGGGACATGCTCGa                        >  2:591353/1‑150 (MQ=255)                                                                                                                          ctgctgGCGCAGGATGCACTccagcagtgatacctgtgcaggcctcttcgcgggtgaacccgctcctaccagggatggcgataagcctgagggttgcgctgggcttggcaatcgagtaggaggcggattcacacccgccgtcctctcaca                     <  1:594731‑M2/150‑131 (MQ=255)                                                                                                                              tgGCGCAGGATGCACTCCAGCAGCCCGGGAAACCGCTCGCCCAGCATCTCGCTACGCAGCGAATTCATATGGGTAGTCCCCACATTGCGGGTTTGCACCAGCCCTGCATCACGCAACACACGGAAGTGGTGGGACATGCTCGACTTCGGc                 <  1:128138/150‑1 (MQ=255)                                                                                                                                      gATGCACTCCAGCAGCCCGGGAAACCGCTCGCCCAGCATCTCGCTACGCAGCGAATTCATATGGGTAGTCCCCACATTGCGGGTTTGCACCAGCCCTGCATCACGCAACACACGGAAGTGGTGGGACATGCTCGACTTCGGCCGAc             >  2:380675/1‑146 (MQ=255)                                                                                                                                      gATGCACTCCAGCAGCCCGGGAAACCGCTCGCCCAGCATCTCGCTACGCAGCGAATTCATATGGGTAGTCCCCACATTGCGGGTTTGCACCAGCCCTGCATCACGCAACACACGGAAGTGGTGGGACATGCTCGACTTCGGCCGAc             <  1:380675/146‑1 (MQ=255)                                                                                                                                         ccACTCCACCAGCCCGGGAAACCGCTCGCCCAGCATCTCGCTACGCAGCGAATTCATATGGGTAGTCCCCACATTGCGGGTTTGCACCAGCCCTGCATCACGCAACACACGGTAGTGGTGGGACATGCTCGACTTCGGCCGACCtccatc      <  1:431449/149‑1 (MQ=255)                                                                                                                                             tccagcagtgatacccgtgcaggcctcttcgcgggtgaacccgctcctaccagggatggcgataagcctgagggttgcgctgggcttggcaatcgagtaggaggcggattcacacccgccgtcctctcacaccaccgtgcgtacggttcc  >  2:594731‑M2/1‑1 (MQ=255)                                                                                                                                             |                                                                                                                                                      TGAGAGGACGGCGGGTGTGAATCCGCCTCCTACTCGATTGCCAAGCCCAGCGCAACCCTCAGGCTTATCGCCATCCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCTGCACAGGTATCACTGCTGGCGCAGGATGCACTCCAGCAGCCCGGGAAACCGCTCGCCCAGCATCTCGCTACGCAGCGAATTCATATGGGTAGTCCCCACATTGCGGGTTTGCACCAGCCCTGCATCACGCAACACACGGAAGTGGTGGGACATGCTCGACTTCGGCCGACCTCCATCCAGC  >  NC_002947/1431425‑1431714

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.