New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1449446 = | 20 (0.630) | 7 (0.230) | 7/240 | NT | 24.8% | coding (243/468 nt) | yhaV | toxin antitoxin system SohB(PrlF)‑YhaV toxin endoribonuclease |
? | NC_002947 | 1449472 = | 23 (0.750) | coding (217/468 nt) | yhaV | toxin antitoxin system SohB(PrlF)‑YhaV toxin endoribonuclease |
CTCAAGTCGAGGCTCAACGGGACAAAGACCCAACGGGTTATACGAAAAGAAATACCTTTAAAAGGCTGGCCGCCATCCGGCGGTTGGCGTTCGATGTAATCCCTCAAGACCCGACCAAACCCGAATACCGGCAAGGGGCAACACTTGGCGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1449597‑1449446 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggtATTCGGGTTTGGTCGGGTCTTGAGGGATTACATCGAACGCCAACCGCCGGATGGCGGCCAGCCTTTTAAAGGTATTTCTTTTCGTATAACCCGTTGGGTCTTTGTCCCGTTGAGCCTCGACTTGA > NC_002947/1449472‑1449596 CTCAAGTCGAGGCTCAACGGGACAAAGACCCAACGGGTTATACGAAAAGAAATACCTTTAAAAGGCTGGCCGCCATCCGGCGGTTGGCGTTCGATGTAATCCCTCAAGACCCGACCAAACCCGAATACCGGCAAGGGGCAACACTTGGCG < 1:516632/150‑1 TCAAGTCGAGGCTCAACGGGACAAAGACCCAACGGGTTATACGAACCGAGATACCTTTAAAAGGCTGGCCGCCATCCGGCGGTTGGCGTTCGATGTAATCCCTCAAGACCCGACCAAACCCGAATACCGGCAAGGGGCAACACTTGGCGG > 1:450366/1‑150 AAAGACCCAACGGGTTATACGAAAAGAAATACCTTTAAAAGGCTGGCCGCCATCCGGCGGTTGGTGTTCGATGTAATCCCTCAAGACCCGACCAAACCCGAATACCGCCAAGTGTTGCCCCTTGCCGGTATTCGGGTTTGGTCGGGTCTT < 2:540490/150‑1 ACCCGAATACCGGCAAGGGGCAACACTTGGCGGTATTCGGGTTTGGTCGGGTCTTGAGGGATTACATCGAACGCCAACCGCCGGATGGCGGCCAGCCTTTTAAAGGTATTTCTTTTCGTA > 1:852628/1‑120 ACCCGAATACCGGCAAGGGGCAACACTTGGCGGTATTCGGGTTTGGTCGGGTCTTGAGGGATTACATCGAACGCCAACCGCCGGATGGCGGCCAGCCTTTTAAAGGTATTTCTTTTCGTA < 2:852628/120‑1 CGGCAAGGGGCAACACTTGGCGGTATTCGGGTTTGGTCGGGTCTTGAGGGATTACATCGAACGCCAACCGCCGGATGGCGGCCAGCCTTTTAAAGGTATTTCTTTTC < 1:731914/107‑1 CGGCAAGGGGCAACACTTGGCGGTATTCGGGTTTGGTCGGGTCTTGAGGGATTACATCGAACGCCAACCGCCGGATGGCGGCCAGCCTTTTAAAGGTATTTCTTTTC > 2:731914/1‑107 GCAAGGGGCAACACTTGGCGGTATTCGGGTTTGGTCGGGT > 1:559037/1‑40 GCAAGGGGCAACACTTGGCGGTATTCGGGTTTGGTCGGGT < 2:559037/40‑1 CGGTATTCGGGTTTGGTCGGGTCTTGAGGGATTACATCGAACGCCAACCGCCGGATGGCGGCCAGCCTTTTAAAGGTATTTCTTTTCGTATAACCCGTTGGGTCTTTGTCCCGTTGAGCCTCGACTTGA > 1:783818/1‑129 CGGTATTCGGGTTTGGTCGGGTCTTGAGGGATTACATCGAACGCCAACCGCCGGATGGCGGCCAGCCTTTTAAAGGTATTTCTTTTCGTATAACCCGTTGGGTCTTTGTCCCGTTGAGCCTCGACTTGA < 2:783818/129‑1 CTCAAGTCGAGGCTCAACGGGACAAAGACCCAACGGGTTATACGAAAAGAAATACCTTTAAAAGGCTGGCCGCCATCCGGCGGTTGGCGTTCGATGTAATCCCTCAAGACCCGACCAAACCCGAATACCGGCAAGGGGCAACACTTGGCGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1449597‑1449446 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggtATTCGGGTTTGGTCGGGTCTTGAGGGATTACATCGAACGCCAACCGCCGGATGGCGGCCAGCCTTTTAAAGGTATTTCTTTTCGTATAACCCGTTGGGTCTTTGTCCCGTTGAGCCTCGACTTGA > NC_002947/1449472‑1449596 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |