New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1449446 =	20 (0.630)	7 (0.230)	7/240	NT	24.8%	coding (243/468 nt)	yhaV	toxin antitoxin system SohB(PrlF)‑YhaV toxin endoribonuclease
	?	NC_002947	1449472 =	23 (0.750)					coding (217/468 nt)	yhaV	toxin antitoxin system SohB(PrlF)‑YhaV toxin endoribonuclease

CCGCTTGCTCGACTCGTCATTGATCCAGGCCAGCACGATGATCCTGCTGGGGGTGTGGTAGCGGAAGAACAACCGGTACTGCTGGAAGAACTTTGCTCTGAACCAGTGCTTGTGGTCACCGCCAAGTGTTGCCCCTTGCCGGTATTCGGGTTTGGTCGGGTCTTGAGGGATTACATCGAACGCCAACCGCCGGATGGCGGCCAGCCTTTTAAAGGTATTTCTTTTCGTATAACCCGTTGGGTCTTTGTCCCGTTGAGCCTCGACTTGAGCGCTTAGCGCGTCCAGTTTGGCCA  >  NC_002947/1449329‑1449621                                                                                                                                                |                                                                                                                                                      ccGCTTGCTCGACTCGTCATTGATCCAGGCCAGCACGATGATCCTGCTGGGGGTGTGGTAGCGGAAGAACAACCGGTACTGCTGGAAGAACTTTGCTCTGAACCAGTGCTTGTGGTCACCGCCAAGTGTTGCCCCTTGCCGGTATTCggg                                                                                                                                                 >  2:576877/1‑150 (MQ=255)         tCGACTCGTCATTGATCCAGGCCAGCACGATGATCCTGCTGGGGGTGTGGTAGCGGAAGAACAACCGGTACTGCTGGAAGAACTTTGCTCTGAACCAGTGCTTGTGGTCACCGCCAAGTGTTGCCCCTTGCCGGTATTCGGGTTTGGTCg                                                                                                                                         <  1:465495/150‑1 (MQ=255)               aaagacccaacgggttatacgaaaagaaatacctttaaaaggctggccgccatccggcggttggtgttcgatgtaatccctcaagacccgaccaaacccgaataccgccaagtgttgccccttgccggtATTCGGGTTTGGTCGGGTCtt                                                                                                                                   <  2:540490‑M2/21‑1 (MQ=255)                   aTTGATCCAGGCCAGCACGATGATCCTGCTGGGGGTGTGGTAGCGGAAGAACAACCGGTACTGCTGGAAGAACTTTGCTCTGAACCAGTGCTTGTGGTCACCGCCAAGTGTTGCCCCTTGCCGGTATTCgg                                                                                                                                                  >  1:774433/1‑131 (MQ=255)                   aTTGATCCAGGCCAGCACGATGATCCTGCTGGGGGTGTGGTAGCGGAAGAACAACCGGTACTGCTGGAAGAACTTTGCTCTGAACCAGTGCTTGTGGTCACCGCCAAGTGTTGCCCCTTGCCGGTATTCgg                                                                                                                                                  <  2:774433/131‑1 (MQ=255)                               cagcagGATCATCGTGCTGGGGGTGTGGTAGCGGAAGAACAACCGGTACTGCTGGAAGAACTTTGCTCTGAACCAGTGCTTGTGGTCACCGCCAAGTGTTGCCCCTTGCCGGTATTCGGGTTTGGTCGGGTCTTGAGGGATTACATCGaa                                                                                                                   >  2:816158/1‑150 (MQ=255)                                tacgaaaagaaatacctttaaaaggctggccgccatccggcggttggcgttcgatgtaatccctcaagacccgaccaaacccgaatACCGCCAAGTGTTGCCCCTTGCCGGTATTCGGGt                                                                                                                                                >  1:852628‑M1/87‑120 (MQ=255)                                tacgaaaagaaatacctttaaaaggctggccgccatccggcggttggcgttcgatgtaatccctcaagacccgaccaaacccgaatACCGCCAAGTGTTGCCCCTTGCCGGTATTCGGGt                                                                                                                                                <  2:852628‑M1/34‑1 (MQ=255)                                                                       aacCGGTACTGCTGGAAGAACTTTGCTCTGAACCAGTGCTTGTGGTCACCGCCAAGTGTTGCCCCTTGCCGGTATTCGGGTTTGGTCGGGTCTTGAGGGATTACATCGAACGCCAACCGCCGGATGGCGGCCAg                                                                                           <  1:121829/134‑1 (MQ=255)                                                                       aacCGGTACTGCTGGAAGAACTTTGCTCTGAACCAGTGCTTGTGGTCACCGCCAAGTGTTGCCCCTTGCCGGTATTCGGGTTTGGTCGGGTCTTGAGGGATTACATCGAACGCCAACCGCCGGATGGCGGCCAg                                                                                           >  2:121829/1‑134 (MQ=255)                                                                                    ggAAGAACTTTGCTCTGAACCAGTGCTTGTGGTCACCGCCAAGTGTTGCCCCTTGCCGGTATTCGGGTTTGGTCGGGTCTTGAGGGATTACATCGAACGCCAACCGCCGGATGGCGGCCAGCCTTTTAAAGGTATTTCTTTTCGTATAAc                                                              <  1:816158/150‑1 (MQ=255)                                                                                     gaagaaCTTTGCTCTGAACCAGTGCTTGTGGTCACCGCCAAGTGTTGCCCCTTGCCGGTATTCGGGTTTGGTCGGGTCTTGAGGGATTACATCGAACGCCAACCGCCGGATGGCGGCCAGc                                                                                          <  2:152042/121‑1 (MQ=255)                                                                                     gaagaaCTTTGCTCTGAACCAGTGCTTGTGGTCACCGCCAAGTGTTGCCCCTTGCCGGTATTCGGGTTTGGTCGGGTCTTGAGGGATTACATCGAACGCCAACCGCCGGATGGCGGCCAGc                                                                                          >  1:152042/1‑121 (MQ=255)                                                                                                 aagacccgaccaaacccgaatACCGGCAAGGGGCAACACTTGGCGGTATTCGGGTTTGGTCGGGTCTTGAGGGATTACATCGAACACCAACCGCCGGATGGCGGCCAGCCTTTTAAAGGTATTTCTTTTCGTATAACCCGTTGGGTCttt                                                 <  2:540490‑M1/129‑1 (MQ=255)                                                                                                   tGAGCCAGTGCTTGTGGTCACCGCCAAGTGTTGCCCCTTGCCGGTATTCGGGTTTGGTCGGGTCTTGAGGGATTACATCGAACGCCAACCGCCGGATGGCGGCCAGCCTTTTAAAGGTATTTCTTTTCGTATAACCCGTTGGGTCTTTGt                                               >  2:33992/1‑150 (MQ=255)                                                                                                   tGAACCAGTGCTTGTGGTCACCGCCAAGTGTTGCCCCTTGCCGGTATTCGGGTTTGGTCGGGTCTTGAGGGATTACATCGAACGCCAACCGCCGGATggc                                                                                                 >  1:469972/1‑100 (MQ=255)                                                                                                   tGAACCAGTGCTTGTGGTCACCGCCAAGTGTTGCCCCTTGCCGGTATTCGGGTTTGGTCGGGTCTTGAGGGATTACATCGAACGCCAACCGCCGGATggc                                                                                                 <  2:469972/100‑1 (MQ=255)                                                                                                       ccAGTGCTTGTGGTCACCGCCAAGTGTTGCCCCTTGCCGGTATTCGGGTTTGGTCGGGTCTTGAGGGATTACATCGAACGCCAACCGCCGGATGGCGGCCAGCCTTTTAAAGGTATTTGTTGTCGTATAACCCGTTGGGTCTTTGTCCCg                                           >  1:181208/1‑150 (MQ=255)                                                                                                       ccAGTGCTTGTGGTCACCGCCAAGTGTTGCCCCTTGCCGGTATTCGGGTTTGGTCGGGTCTTGAGGGATTACATCGAACGCCAACCGCCGGATGGCGGCCAGCCTTTTAAAGGTATTTCTTTTCGTATAACCCGTTgg                                                       >  2:86913/1‑138 (MQ=255)                                                                                                       ccAGTGCTTGTGGTCACCGCCAAGTGTTGCCCCTTGCCGGTATTCGGGTTTGGTCGGGTCTTGAGGGATTACATCGAACGCCAACCGCCGGATGGCGGCCAGCCTTTTAAAGGTATTTCTTTTCGTATAACCCGTTgg                                                       <  1:86913/138‑1 (MQ=255)                                                                                                        cAGTGCTTGTGGTCACCGCCAAGTGTTGCCCCTTGCCGGTATTCGGGTTTGGTCGGGTCTTGAGGGATTACATCGAACGCCAACCGCCGGATGGCGGCCAGCCTTTTAAAGGTATTTCTTTTCGTATAACCCGTTGGGTCTTTGTCCCGt                                          >  2:485209/1‑150 (MQ=255)                                                                                                              acccgaataccggcaaggggcaacacttggcggtATTCGGGTTTGGTCGGGTCTTGAGGGATTACATCGAACGCCAACCGCCGGATGGCGGCCAGCCTTTTAAAGGTATTTCTTTTCGta                                                                  >  1:852628‑M2/35‑120 (MQ=255)                                                                                                              acccgaataccggcaaggggcaacacttggcggtATTCGGGTTTGGTCGGGTCTTGAGGGATTACATCGAACGCCAACCGCCGGATGGCGGCCAGCCTTTTAAAGGTATTTCTTTTCGta                                                                  <  2:852628‑M2/86‑1 (MQ=255)                                                                                                                   gTCACCGCCAAGTGTTGCCCCTTGCCGGTATTCGGGTTTGGTCGGGTCTTGAGGGATTACATCGAACGCCAACCGCCGGATGGCGGCCAGCCTTTTAAAGGTATTTCTTTTCGTATAACCCGTTGGGTCTTTGTCCCGTTGAGCCTCGAc                               >  1:340952/1‑150 (MQ=255)                                                                                                                       CCGCCAAGTGTTGCCCCTTGCCGGTATTCGGGTTTGGTCGGGTCTTGAGGGATTACATCGAACGCCAACCGCCGGATGGCGGCCAGCCTTTTAAAGGTATCTCGGTTCGTATAACCCGTTGGGTCTTTGTCCCGTTGAGCCTCGACTTGa                           >  1:450366‑M1/1‑150 (MQ=255)                                                                                                                        cggcaaggggcaacacttggcggtATTCGGGTTTGGTCGGGTCTTGAGGGATTACATCGAACGCCAACCGCCGGATGGCGGCCAGCCTTTTAAAGGTATTTCTTTTc                                                                     <  1:731914‑M2/83‑1 (MQ=255)                                                                                                                        cggcaaggggcaacacttggcggtATTCGGGTTTGGTCGGGTCTTGAGGGATTACATCGAACGCCAACCGCCGGATGGCGGCCAGCCTTTTAAAGGTATTTCTTTTc                                                                     >  2:731914‑M2/25‑107 (MQ=255)                                                                                                                        CGCCAAGTGTTGCCCCTTGCCGGTATTCGGGTTTGGTCGGGTCTTGAGGGATTACATCGAACGCCAACCGCCGGATGGCGGCCAGCCTTTTAAAGGTATTTCTTTTCGTATAACCCGTTGGGTCTTTGTCCCGTTGAGCCTCGACTTGAg                          <  1:516632‑M1/150‑1 (MQ=255)                                                                                                                          gcaaggggcaacacttggcggtATTCGGGTTTGGTCGGGt                                                                                                                                      >  1:559037‑M2/23‑40 (MQ=255)                                                                                                                          gcaaggggcaacacttggcggtATTCGGGTTTGGTCGGGt                                                                                                                                      <  2:559037‑M2/18‑1 (MQ=255)                                                                                                                          ccAAGTGTTGCCCCTTGCCGGTATTCGGGTTTGGTCGGGTCTTGAGGGATTACATCGAACGCCAACCGCCGGATGGCGGCCAGCCTTTTAAAGGTATTTCTTTTCGTATAACCCGTTGGGTCTTTGTCCCGTTGAGCCTCGACtt                             <  2:123882/145‑1 (MQ=255)                                                                                                                          ccAAGTGTTGCCCCTTGCCGGTATTCGGGTTTGGTCGGGTCTTGAGGGATTACATCGAACGCCAACCGCCGGATGGCGGCCAGCCTTTTAAAGGTATTTCTTTTCGTATAACCCGTTGGGTCTTTGTCCCGTTGAGCCTCGACtt                             >  1:123882/1‑145 (MQ=255)                                                                                                                                    ccccTTGCCGGTATTCGGGTTTGGTCGGGTCTTGAGGGATTACATCGAACGCCAACCGCCGGATGGCGGCCAGCCTTTTAAAGGTATTTCTTTTCGTATAACCCGTTGGGTCTTTGTCCCGTTGAGCCTCGACTTGAGCGCTTAGCGCGt              >  2:76196/1‑150 (MQ=255)                                                                                                                                     cccTTGCCGGTATTCGGGTTTGGTCGGGTCTTGAGGGATTACATCGAACGCCAACCGCCGGATGGCGGCCAGCCTTTTAAAGGTATTTCTTTTCGTATAACCCGTTGGGTCTTTGTCCCGTTGAGCCTCGACTTGAGCGCTTAGCGCGTc             >  1:583630/1‑150 (MQ=255)                                                                                                                                     cccTTGCCGGTATTCGGGTTTGGTCGGGTCTTGAGGGATTACATCAAAGGCCAACCGCCGGATGGCGGCCACCCTTTTAAAGGTATTTCTTTTCGTATAACCCGTTGAGTCTTTGTCCTGTTTAGCCTCGACTTGAGCGCTTAGCGCGTc             >  1:275646/1‑150 (MQ=255)                                                                                                                                            cggtATTCGGGTTTGGTCGGGTCTTGAGGGATTACATCGAACGCCAACCGCCGGATGGCGGCCAGCCTTTTAAAGGTATTTCTTTTCGTATAACCCGTTGGGTCTTTGTCCCGTTGAGCCTCGACTTGa                           <  2:783818‑M2/125‑1 (MQ=255)                                                                                                                                            cggtATTCGGGTTTGGTCGGGTCTTGAGGGATTACATCGAACGCCAACCGCCGGATGGCGGCCAGCCTTTTAAAGGTATTTCTTTTCGTATAACCCGTTGGGTCTTTGTCCCGTTGAGCCTCGACTTGa                           >  1:783818‑M2/5‑129 (MQ=255)                                                                                                                                                aTTCGGGTTTGGTCGGGTCTTGAGGGATTACATCGAACGCCAACCGCCGCATGGCGGCCAGCCTTTTAAAGGTAAAGCTTTTCGTATAACCCGTTGGGTCTTTGTCCCGTTGAGCCTCGACTTGAGCGCTTAGCGCGTCCAGTTTGGCCa  <  1:485209/150‑1 (MQ=255)                                                                                                                                                |                                                                                                                                                      CCGCTTGCTCGACTCGTCATTGATCCAGGCCAGCACGATGATCCTGCTGGGGGTGTGGTAGCGGAAGAACAACCGGTACTGCTGGAAGAACTTTGCTCTGAACCAGTGCTTGTGGTCACCGCCAAGTGTTGCCCCTTGCCGGTATTCGGGTTTGGTCGGGTCTTGAGGGATTACATCGAACGCCAACCGCCGGATGGCGGCCAGCCTTTTAAAGGTATTTCTTTTCGTATAACCCGTTGGGTCTTTGTCCCGTTGAGCCTCGACTTGAGCGCTTAGCGCGTCCAGTTTGGCCA  >  NC_002947/1449329‑1449621

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.