New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1449446 =	20 (0.630)	7 (0.230)	7/240	NT	24.8%	coding (243/468 nt)	yhaV	toxin antitoxin system SohB(PrlF)‑YhaV toxin endoribonuclease
	?	NC_002947	1449472 =	23 (0.750)					coding (217/468 nt)	yhaV	toxin antitoxin system SohB(PrlF)‑YhaV toxin endoribonuclease

AAGCATCGTCGCTACTTTCATAGGCCCGCTTGCTCGACTCGTCATTGATCCAGGCCAGCACGATGATCCTGCTGGGGGTGTGGTAGCGGAAGAACAACCGGTACTGCTGGAAGAACTTTGCTCTGAACCAGTGCTTGTGGTCACCGCCAAGTGTTGCCCCTTGCCGGTATTCGGGTTTGGTCGGGTCTTGAGGGATTACATCGAACGCCAACCGCCGGATGGCGGCCAGCCTTTTAAAGGTATTTCTTTTCGTATAACCCGTTGGGTCTTTGTCCCGTTGAGCCTCGAC  >  NC_002947/1449304‑1449592                                                                                                                                               |                                                                                                                                                   aaGCATCGTCGCTACTTTCATAGGCCCGCTTGCTCGACTCGTCATTGATCCAGGCCAGCACGATGATCCTGCTGGGGGTGTGGTAGCGGAAGAACAACCGGTACTGCTGGAAGAACTTTGCTCTGAACCAGTGCTTGTGGTCACCGCCaa                                                                                                                                             <  2:763544/150‑1 (MQ=255)                tttCATAGGCCCGCTTGCTCGACTCGTCATTGATCCAGGCCAGCACGATGATCCTGCTGGGGGTGTGGTAGCGGAAGAACAACCGGTACTGCTGGAAGAACTTTGCTCTGAACCAGTGCTTGTGGTCACCGCCaa                                                                                                                                             >  2:417493/1‑135 (MQ=255)                tttCATAGGCCCGCTTGCTCGACTCGTCATTGATCCAGGCCAGCACGATGATCCTGCTGGGGGTGTGGTAGCGGAAGAACAACCGGTACTGCTGGAAGAACTTTGCTCTGAACCAGTGCTTGTGGTCACCGCCaa                                                                                                                                             <  1:417493/135‑1 (MQ=255)                  tcaagtcgaggctcaacgggacaaagacccaacgggttatacgaaaagaaatacctttaaaaggctggccgccatccggcggttggcgttcgatgtaatccctcaagacccgaccaaacccgaatACCg                                                                                                                                                 <  2:783818‑M1/4‑1 (MQ=255)                  tcaagtcgaggctcaacgggacaaagacccaacgggttatacgaaaagaaatacctttaaaaggctggccgccatccggcggttggcgttcgatgtaatccctcaagacccgaccaaacccgaatACCg                                                                                                                                                 >  1:783818‑M1/126‑129 (MQ=255)                          ccGCTTGCTCGACTCGTCATTGATCCAGGCCAGCACGATGATCCTGCTGGGGGTGTGGTAGCGGAAGAACAACCGGTACTGCTGGAAGAACTTTGCTCTGAACCAGTGCTTGTGGTCACCGCCAAGTGTTGCCCCTTGCCGGTATTCggg                                                                                                                    >  2:576877/1‑150 (MQ=255)                                  tCGACTCGTCATTGATCCAGGCCAGCACGATGATCCTGCTGGGGGTGTGGTAGCGGAAGAACAACCGGTACTGCTGGAAGAACTTTGCTCTGAACCAGTGCTTGTGGTCACCGCCAAGTGTTGCCCCTTGCCGGTATTCGGGTTTGGTCg                                                                                                            <  1:465495/150‑1 (MQ=255)                                            aTTGATCCAGGCCAGCACGATGATCCTGCTGGGGGTGTGGTAGCGGAAGAACAACCGGTACTGCTGGAAGAACTTTGCTCTGAACCAGTGCTTGTGGTCACCGCCAAGTGTTGCCCCTTGCCGGTATTCgg                                                                                                                     >  1:774433/1‑131 (MQ=255)                                            aTTGATCCAGGCCAGCACGATGATCCTGCTGGGGGTGTGGTAGCGGAAGAACAACCGGTACTGCTGGAAGAACTTTGCTCTGAACCAGTGCTTGTGGTCACCGCCAAGTGTTGCCCCTTGCCGGTATTCgg                                                                                                                     <  2:774433/131‑1 (MQ=255)                                                        cagcagGATCATCGTGCTGGGGGTGTGGTAGCGGAAGAACAACCGGTACTGCTGGAAGAACTTTGCTCTGAACCAGTGCTTGTGGTCACCGCCAAGTGTTGCCCCTTGCCGGTATTCGGGTTTGGTCGGGTCTTGAGGGATTACATCGaa                                                                                      >  2:816158/1‑150 (MQ=255)                                                         tacgaaaagaaatacctttaaaaggctggccgccatccggcggttggcgttcgatgtaatccctcaagacccgaccaaacccgaatACCGCCAAGTGTTGCCCCTTGCCGGTATTCGGGt                                                                                                                   >  1:852628‑M1/87‑120 (MQ=255)                                                         tacgaaaagaaatacctttaaaaggctggccgccatccggcggttggcgttcgatgtaatccctcaagacccgaccaaacccgaatACCGCCAAGTGTTGCCCCTTGCCGGTATTCGGGt                                                                                                                   <  2:852628‑M1/34‑1 (MQ=255)                                                            gaaaagaaatacctttaaaaggctggccgccatccggcggttggcgttcgatgtaatccctcaagacccgaccaaacccgaatACCGCCAAGTGTTGCCCCTTGCCg                                                                                                                             <  1:731914‑M1/24‑1 (MQ=255)                                                            gaaaagaaatacctttaaaaggctggccgccatccggcggttggcgttcgatgtaatccctcaagacccgaccaaacccgaatACCGCCAAGTGTTGCCCCTTGCCg                                                                                                                             >  2:731914‑M1/84‑107 (MQ=255)                                                                                                aacCGGTACTGCTGGAAGAACTTTGCTCTGAACCAGTGCTTGTGGTCACCGCCAAGTGTTGCCCCTTGCCGGTATTCGGGTTTGGTCGGGTCTTGAGGGATTACATCGAACGCCAACCGCCGGATGGCGGCCAg                                                              >  2:121829/1‑134 (MQ=255)                                                                                                aacCGGTACTGCTGGAAGAACTTTGCTCTGAACCAGTGCTTGTGGTCACCGCCAAGTGTTGCCCCTTGCCGGTATTCGGGTTTGGTCGGGTCTTGAGGGATTACATCGAACGCCAACCGCCGGATGGCGGCCAg                                                              <  1:121829/134‑1 (MQ=255)                                                                                                             ggAAGAACTTTGCTCTGAACCAGTGCTTGTGGTCACCGCCAAGTGTTGCCCCTTGCCGGTATTCGGGTTTGGTCGGGTCTTGAGGGATTACATCGAACGCCAACCGCCGGATGGCGGCCAGCCTTTTAAAGGTATTTCTTTTCGTATAAc                                 <  1:816158/150‑1 (MQ=255)                                                                                                              gaagaaCTTTGCTCTGAACCAGTGCTTGTGGTCACCGCCAAGTGTTGCCCCTTGCCGGTATTCGGGTTTGGTCGGGTCTTGAGGGATTACATCGAACGCCAACCGCCGGATGGCGGCCAGc                                                             >  1:152042/1‑121 (MQ=255)                                                                                                              gaagaaCTTTGCTCTGAACCAGTGCTTGTGGTCACCGCCAAGTGTTGCCCCTTGCCGGTATTCGGGTTTGGTCGGGTCTTGAGGGATTACATCGAACGCCAACCGCCGGATGGCGGCCAGc                                                             <  2:152042/121‑1 (MQ=255)                                                                                                                          aagacccgaccaaacccgaatACCGGCAAGGGGCAACACTTGGCGGTATTCGGGTTTGGTCGGGTCTTGAGGGATTACATCGAACACCAACCGCCGGATGGCGGCCAGCCTTTTAAAGGTATTTCTTTTCGTATAACCCGTTGGGTCttt                    <  2:540490‑M1/129‑1 (MQ=255)                                                                                                                            tGAGCCAGTGCTTGTGGTCACCGCCAAGTGTTGCCCCTTGCCGGTATTCGGGTTTGGTCGGGTCTTGAGGGATTACATCGAACGCCAACCGCCGGATGGCGGCCAGCCTTTTAAAGGTATTTCTTTTCGTATAACCCGTTGGGTCTTTGt                  >  2:33992/1‑150 (MQ=255)                                                                                                                            tGAACCAGTGCTTGTGGTCACCGCCAAGTGTTGCCCCTTGCCGGTATTCGGGTTTGGTCGGGTCTTGAGGGATTACATCGAACGCCAACCGCCGGATggc                                                                    <  2:469972/100‑1 (MQ=255)                                                                                                                            tGAACCAGTGCTTGTGGTCACCGCCAAGTGTTGCCCCTTGCCGGTATTCGGGTTTGGTCGGGTCTTGAGGGATTACATCGAACGCCAACCGCCGGATggc                                                                    >  1:469972/1‑100 (MQ=255)                                                                                                                             acccgaccaaacccgaatACCGCCAAGTGTTGCCCCTTGc                                                                                                                               <  2:559037‑M1/22‑1 (MQ=255)                                                                                                                             acccgaccaaacccgaatACCGCCAAGTGTTGCCCCTTGc                                                                                                                               >  1:559037‑M1/19‑40 (MQ=255)                                                                                                                                ccAGTGCTTGTGGTCACCGCCAAGTGTTGCCCCTTGCCGGTATTCGGGTTTGGTCGGGTCTTGAGGGATTACATCGAACGCCAACCGCCGGATGGCGGCCAGCCTTTTAAAGGTATTTGTTGTCGTATAACCCGTTGGGTCTTTGTCCCg              >  1:181208/1‑150 (MQ=255)                                                                                                                                ccAGTGCTTGTGGTCACCGCCAAGTGTTGCCCCTTGCCGGTATTCGGGTTTGGTCGGGTCTTGAGGGATTACATCGAACGCCAACCGCCGGATGGCGGCCAGCCTTTTAAAGGTATTTCTTTTCGTATAACCCGTTgg                          <  1:86913/138‑1 (MQ=255)                                                                                                                                ccAGTGCTTGTGGTCACCGCCAAGTGTTGCCCCTTGCCGGTATTCGGGTTTGGTCGGGTCTTGAGGGATTACATCGAACGCCAACCGCCGGATGGCGGCCAGCCTTTTAAAGGTATTTCTTTTCGTATAACCCGTTgg                          >  2:86913/1‑138 (MQ=255)                                                                                                                                 cAGTGCTTGTGGTCACCGCCAAGTGTTGCCCCTTGCCGGTATTCGGGTTTGGTCGGGTCTTGAGGGATTACATCGAACGCCAACCGCCGGATGGCGGCCAGCCTTTTAAAGGTATTTCTTTTCGTATAACCCGTTGGGTCTTTGTCCCGt             >  2:485209/1‑150 (MQ=255)                                                                                                                                            gTCACCGCCAAGTGTTGCCCCTTGCCGGTATTCGGGTTTGGTCGGGTCTTGAGGGATTACATCGAACGCCAACCGCCGGATGGCGGCCAGCCTTTTAAAGGTATTTCTTTTCGTATAACCCGTTGGGTCTTTGTCCCGTTGAGCCTCGAc  >  1:340952/1‑150 (MQ=255)                                                                                                                                               |                                                                                                                                                   AAGCATCGTCGCTACTTTCATAGGCCCGCTTGCTCGACTCGTCATTGATCCAGGCCAGCACGATGATCCTGCTGGGGGTGTGGTAGCGGAAGAACAACCGGTACTGCTGGAAGAACTTTGCTCTGAACCAGTGCTTGTGGTCACCGCCAAGTGTTGCCCCTTGCCGGTATTCGGGTTTGGTCGGGTCTTGAGGGATTACATCGAACGCCAACCGCCGGATGGCGGCCAGCCTTTTAAAGGTATTTCTTTTCGTATAACCCGTTGGGTCTTTGTCCCGTTGAGCCTCGAC  >  NC_002947/1449304‑1449592

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.