New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1473183 = | 27 (0.850) | 5 (0.170) | 5/236 | NT | 13.6% | coding (1045/1317 nt) | algD | GDP‑mannose 6‑dehydrogenase |
? | NC_002947 | 1473227 = | 38 (1.260) | coding (1001/1317 nt) | algD | GDP‑mannose 6‑dehydrogenase |
CCTTCGAGCTGATCGAAGCCCACGACAAGCGCAAGGTCGCCCTGCTGGGCCTGAGCTTCAAGGCCGGCACCGACGACCTGCGCGAAAGCCCGCTGGTGGAACTGGCCGAGCGCCTGATCGGCAAGGGCTACCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1473317‑1473183 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accagcGGGCTTTCGCGCAGGTCGTCGGTGCCGGCCTTGAAGCTCAGGCCCAGCAGGGCGACCTTGCGCTTGTCGTGGGCTTCGATCAGCTCGAAGGCGTTCTGCACCTGCGATTCGTTGCTGCGCATCAGCGAGTCGAGCAGCGGTGCACGGA > NC_002947/1473227‑1473374 CCTTCGAGCTGATCGAAGCCCACGACAAGCGCAAGGTCGCCCTGCTGGGCCTGAGCTTCAAGGCCGGCACCGACGACCTGCGCGAAAGCCCGCTGGTGGAACTGGCCGAGCGCCTGATCGGCAAGGGCTA < 1:391987/130‑1 CCTTCGAGCTGATCGAAGCCCACGACAAGCGCAAGGTCGCCCTGCTGGGCCTGAGCTTCAAGGCCGGCACCGACGACCTGCGCGAAAGCCCGCTGGTGGAACTGGCCGAGCGCCTGATCGGCAAGGGCTA > 2:391987/1‑130 GAAAGCCCGCTGGTGGAACTGGCCGAGCGCCTGATCGGCAAGGGCTACCAGCGGGCTTTCGCGCAGGTCGTCGGTGCCGGCCTTGAAGCTCAGGCCCAGCAGGGCGACCTTGCGCTTGTCGTGGGCTTCGATCAGCTCGAAGGCGTTCTG > 2:209225/1‑150 CCGCTGGTGGAACTGGCCGAGCGCCTGATCGGCAAGGGCTACCAGCTGGCTTTCGCGCAGGTCGTCGGTGCCGGCCTTGAAGCTCAGGCCCAGCAGGGCGACCTTGCGCTTGTCGTGGGCTTCGATCAGCTCGAAGGCGTT > 1:67001/1‑141 CCGCTGGTGGAACTGGCCGAGCGCCTGATCGGCAAGGGCTACCAGCTGGCTTTCGCGCAGGTCGTCGGTGCCGGCCTTGAAGCTCAGGCCCAGCAGGGCGACCTTGCGCTTGTCGTGGGCTTCGATCAGCTCGAAGGCGTT < 2:67001/141‑1 GGAACTGGCCGAGCGCCTGATCGGCAAGGGCTACCAGCGGGCTTTCGCGCAGGTCGTCGGTGCCGGCCTTGAAGCTCAGGCCCAGCAGGGCGACCTTGCGCTTGTCGTGGGCTTCGATCAGCTCGAAGGCGTTCT > 1:659531/1‑135 GGAACTGGCCGAGCGCCTGATCGGCAAGGGCTACCAGCGGGCTTTCGCGCAGGTCGTCGGTGCCGGCCTTGAAGCTCAGGCCCAGCAGGGCGACCTTGCGCTTGTCGTGGGCTTCGATCAGCTCGAAGGCGTTCT < 2:659531/135‑1 ACCAGCGGGCTTTCGCGCAGGTCGTCGGTGCCGGCCTTGAAGCTCAGGCCCAGCAGGGCGACCTTGCGCTTGTCGTGGGCTTCGATCAGCTCGAAGGCGTTCTGCACCTGCGATTCGTTGCTGCGCATCAGCGAGTCGAGCAGCGGTGCA > 1:94479/1‑150 GCGGGCTTTCGCGCAGGTCGTCGGTGCCGGCCTTGAAGCTCAGGCCCAGCAGGGCGACCTTGCGCTTGTCGTGGGCTTCGATCAGCTCGAAGGCGTTCTGCACCTGCGATTCGTTGCTGCGCATCAGCGAGTCGAGCAGCGGTGCACGGA < 1:442219/150‑1 GCGGGCTTTCGCGCAGGTCGTCGGTGCCGGCCTTGAAGCTCAGGCCCAGCAGGGCGACCTTGCGCTTGTCGTGGGCTTCGATCAGCTCGAAGGCGTT > 1:3134/1‑97 GCGGGCTTTCGCGCAGGTCGTCGGTGCCGGCCTTGAAGCTCAGGCCCAGCAGGGCGACCTTGCGCTTGTCGTGGGCTTCGATCAGCTCGAAGGCGTT < 2:3134/97‑1 CCTTCGAGCTGATCGAAGCCCACGACAAGCGCAAGGTCGCCCTGCTGGGCCTGAGCTTCAAGGCCGGCACCGACGACCTGCGCGAAAGCCCGCTGGTGGAACTGGCCGAGCGCCTGATCGGCAAGGGCTACCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1473317‑1473183 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accagcGGGCTTTCGCGCAGGTCGTCGGTGCCGGCCTTGAAGCTCAGGCCCAGCAGGGCGACCTTGCGCTTGTCGTGGGCTTCGATCAGCTCGAAGGCGTTCTGCACCTGCGATTCGTTGCTGCGCATCAGCGAGTCGAGCAGCGGTGCACGGA > NC_002947/1473227‑1473374 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |