New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1473183 =	27 (0.850)	5 (0.170)	5/236	NT	13.6%	coding (1045/1317 nt)	algD	GDP‑mannose 6‑dehydrogenase
	?	NC_002947	1473227 =	38 (1.260)					coding (1001/1317 nt)	algD	GDP‑mannose 6‑dehydrogenase

TTGCCGAGGACGATGATGTCGGCGTTGTCGATCACCTGCTGCAAGTTGGCGTTGAGCAGCGACGACACGTGCGGGATCTTCGACTCGATGTAGTCCTTGTTGGCGCCGTGAACACGGGCGTACTGGACGTTCTCGTCGTAGATGTCCAGCTGGTAGCCCTTGCCGATCAGGCGCTCGGCCAGTTCCACCAGCGGGCTTTCGCGCAGGTCGTCGGTGCCGGCCTTGAAGCTCAGGCCCAGCAGGGCGACCTTGCGCTTGTCGTGGGCTTCGATCAGCTCGAAGGCGTTCTGCACCTGC  >  NC_002947/1473035‑1473331                                                                                                                                                     |                                                                                                                                                     tccgtgcaccgctgctcgactcgctgatgcgcagcaacgaatcgcaggtgcagaacgccttcgagctgatcgaagcccacgacaagcgcaaggtcgccctgctgggcctgagcttcaaggccggcaccgacgacctgcgcgaaagcccGc                                                                                                                                                     <  1:442219‑M1/2‑1 (MQ=255)     tgcaccgctgctcgactcgctgatgcgcagcaacgaatcgcaggtgcagaacgccttcgagctgatcgaagcccacgacaagcgcaaggtcgccctgctgggcctgagcttcaaggccggcaccgacgacctgcgcgaaagcccGCTGGt                                                                                                                                                 >  1:94479‑M1/145‑150 (MQ=255)            gatgatGTCGGCGTTGTCGATCACCTGCTGCAAGTTGGCGTTGAGCAGCGACGACACGTGCGGGATCTTCGACTCGATGTAGTCCTTGTTGGCGCCGTGAACACGGGCGTACTGGACGTTCTCGTCGTAGATGTCCAGCTGGTAGCCCtt                                                                                                                                          >  1:97591/1‑150 (MQ=255)                      gCGTTGTCGATCACCTGCTGCAAGTTGGCGTTGAGCAGCGACGACACGTGCGGGATCTTCGACTCGATGTAGTCCTTGTTGGCGCCGTGAACACGGGCGTACTGGACGTTCTCGTCGTAGATGTCCAGCTGGTAGCCCTTGACGATCAgg                                                                                                                                <  1:715468/150‑1 (MQ=255)                                         gcAAGTTGGCGTTGAGCAGCGACGACACGTGCGGGATCTTCGATTCGCGATACTGCTGTGTGGCGCCGTGAACACGGGCGTACTGGACGTTCTCGTCGTAGATGTGCAGCTGGTAGCCCTTGCCGATCAGGCGCTCGGCCAGTTccacca                                                                                                             <  2:23151/150‑1 (MQ=255)                                                   gTTGAGCAGCGACGACACGTGCGGGATCTTCGACTCGATGTAGTCCTTGTTGGCGCCGTGAACACGGGCGTACTGGACGTTCTCGTCGTAGATGTCCAGCTGGTAGCCCTTGcc                                                                                                                                       >  2:475202/1‑114 (MQ=255)                                                   gTTGAGCAGCGACGACACGTGCGGGATCTTCGACTCGATGTAGTCCTTGTTGGCGCCGTGAACACGGGCGTACTGGACGTTCTCGTCGTAGATGTCCAGCTGGTAGCCCTTGcc                                                                                                                                       <  1:475202/114‑1 (MQ=255)                                                   gTTGAGCAGCGACGACACGTGCGGGATCTTCGACTCGATGTAGTCCTTGTTGGCGCCGTGAACACGGGCGTACTGGACGTTCTCGTCGTAGATGTCCAGCTGGTAGCCCTTGc                                                                                                                                        >  1:15219/1‑113 (MQ=255)                                                   gTTGAGCAGCGACGACACGTGCGGGATCTTCGACTCGATGTAGTCCTTGTTGGCGCCGTGAACACGGGCGTACTGGACGTTCTCGTCGTAGATGTCCAGCTGGTAGCCCTTGc                                                                                                                                        <  2:15219/113‑1 (MQ=255)                                                   cagaacgccttcgagctgatcgaagcccacgacaagcgcaaggtcgccctgctgggcctgagcttcaaggccggcaccgacgacctgcgcgaaagcccGCTGGTAGCCCTTGCCGATCAGGCGCTCGGCCAGTTCCACCAGCGGGCTTTc                                                                                                   >  2:209225‑M1/99‑150 (MQ=255)                                                    agaacgccttcgagctgatcgaagcccacgacaagcgcaaggtcgccctgctgggcctgagcttcaaggccggcaccgacgacctgcgcgaaagcccGCTGGTAGCCCTTGCCGATCAGGCGCTCGGCCAGTTcc                                                                                                                 <  2:659531‑M1/38‑1 (MQ=255)                                                    agaacgccttcgagctgatcgaagcccacgacaagcgcaaggtcgccctgctgggcctgagcttcaaggccggcaccgacgacctgcgcgaaagcccGCTGGTAGCCCTTGCCGATCAGGCGCTCGGCCAGTTcc                                                                                                                 >  1:659531‑M1/98‑135 (MQ=255)                                                      aacgccttcgagctgatcgaagcccacgacaagcgcaaggtcgccctgctgggcctgagcttcaaggccggcaccgacgacctgcgcgaaagcccGc                                                                                                                                                     >  1:3134‑M1/96‑97 (MQ=255)                                                      aacgccttcgagctgatcgaagcccacgacaagcgcaaggtcgccctgctgggcctgagcttcaaggccggcaccgacgacctgcgcgaaagcccGc                                                                                                                                                     <  2:3134‑M1/2‑1 (MQ=255)                                                      aacgccttcgagctgatcgaagcccacgacaagcgcaaggtcgccctgctgggcctgagcttcaaggccggcaccgacgacctgcgcgaaagccaGCTGGTAGCCCTTGCCGATCAGGCGCTCGGCCAGTTCCACCAGCgg                                                                                                         <  2:67001‑M1/46‑1 (MQ=255)                                                      aacgccttcgagctgatcgaagcccacgacaagcgcaaggtcgccctgctgggcctgagcttcaaggccggcaccgacgacctgcgcgaaagccaGCTGGTAGCCCTTGCCGATCAGGCGCTCGGCCAGTTCCACCAGCgg                                                                                                         >  1:67001‑M1/96‑141 (MQ=255)                                                        gcagcGACGACACGTGCGGGATCTTCGACTCGATGTAGTCCTTGTTGGCGCCGTGAACACGGGCGTACTGGACGTTCTCGTCGTAGATGTCCAGCTGGTAGCCCTTGCCGATCAGGCGCTCGGCCAGTTCCACCAGCGGGCTTTCGCGCa                                                                                              >  2:71562/1‑150 (MQ=255)                                                        gcagcGACGACACGTGCGGGATCTTCGACTCGATGTAGTCCTTGTTGGCGCCGTGAACACGGGCGTACTGGACGTTCTCGTCGTAGATGTCCAGCTGGTAGCCCTTGCCGATCAGGCGCTCGGCCAGTTCCACCAGCGGGCTTTCGCGCa                                                                                              <  1:71562/150‑1 (MQ=255)                                                                              cTTCGACTCGATGTAGTCCTTGTTGGCGCCGTGAACACGGGCGTACTGGACGTTCTCGTCGTAGATGTCCAGCTGGTAGCCCTTGCCGATCAGGCGCTCGGCCAGTTCCACCAGCGGGCTTTCGCGCAGGTCGTCGGTGCCGGCCTTGaa                                                                        <  1:110637/150‑1 (MQ=255)                                                                                     tCGATGTAGTCCTTGTTGGCGCCGTGAACACGGGCGTACTGGACGTTCTCGTCGTAGATGTCCAGCTGGTAGCCCTTGCCGATCAGGCGCTCGGCCAGTTCCACCAGCGGGCTTTCGCGCAGGTCGTCGGTGCCGGCCTTGAAGCTCAgg                                                                 <  2:467866/150‑1 (MQ=255)                                                                                              tCCTTGTTGGCGCCGTGAACACGGGCGTACTGGACGTTCTCGTCGTAGATGTCCAGCTGGTAGCCCTTGCCGATCAGGCGCTCGGCCAGTTCCACCAGCGGGCTTTCGCGCAGgtcgt                                                                                        >  2:22158/1‑118 (MQ=255)                                                                                              tCCTTGTTGGCGCCGTGAACACGGGCGTACTGGACGTTCTCGTCGTAGATGTCCAGCTGGTAGCCCTTGCCGATCAGGCGCTCGGCCAGTTCCACCAGCGGGCTTTCGCGCAGgtcgt                                                                                        <  1:22158/118‑1 (MQ=255)                                                                                              tCCTTGTTGGCGCCGTGAACACGGGCGTACTGGACGTTCTCGTCGTAGATGTCCAGCTGGTAGCCCTTGCCGATCAGGCGCTCGGCCAGTTCCACCAGCGGGCTTTCGCGCAGGTCGTCGGTGCCGGCCTTGAAGCTCAGGCCCAGCAgg                                                        >  2:772637/1‑150 (MQ=255)                                                                                               ccTTGTTGGCGCCGTGAACACGGGCGTACTGGACGTTCTAGTCGTAGATGTCCAGCTGGTAGCCCTTGCCGATCAGGCGCTCGGCCAGTTCCACCAGCGGGCTTTCGCGCAGGTCGTCGGTGCCGGCCTTGAAGCTCAGGCCCAGCAggg                                                       >  1:363740/1‑150 (MQ=255)                                                                                                cTTGTTGGCGCCGTGAACACGGGCGTACTGGACGTTCTCGTCGTAGATGTCCCGCTGGTAGCCCTTGCCGCTCAGGCGCTTGGCCAGTTCCACCAGCGGGCTTTCGCGCAGGTCGTCGGTGCCGGCCTTGAAGCTCAGGCCCAGCAGGGc                                                      <  2:97591/150‑1 (MQ=255)                                                                                                    ttgGCGCCGTGAACACGGGCGTACTGGACGTTCTCGTCGTAGATGTCCAGCTGGTAGCCCTTGCCGATCAGGCGCTCGGCCAGTTCCACCAGCGGGCTTTCGCGCAGGTCGTCGGTGCCGGCCTTGAAGCTCAGGCCCAGCAGGGCGAcc                                                  >  1:18098/1‑150 (MQ=255)                                                                                                      ggCGCCGTGAACACGGGCGTACTGGACGTTCTCGTCGTAGATGTCCAGCTGGTAGCCCTTGCCGATCAGGCGCTCGGCCAGTTCCACCAGCGGGCTTTCGCGCAGGTCGTCGGTGCCGGCCTTGAAGCTCAGGCCCAGCAGGGCGACCtt                                                <  2:344241/150‑1 (MQ=255)                                                                                                               aaCACGGGCGTACTGGACGTTCTCGTCGTAGATGTCCAGCTGGTAGCCCTTGCCGATCAGGCGCTCGGCCAGTTCCACCAGCGGGCTTTCGCGCAGGTCGTCGGTGCCGGCCTTGAAGCTCAGGCCCAGCAGGGCGACCTTGCGCTTGTc                                       >  1:298876/1‑150 (MQ=255)                                                                                                                  acGGGCGTACTGGACGTTCTCGTCGTAGATGTCCAGCTGGTAGCCCTTGCCGATCAGGCGCTCGGCCAGTTCCACCAGCGGGCTTTCGCGCAGGTCGTCGGTGCCGGCCTTGAAGCTCAGGCCCAGCAGGGCGACCTTGCGCTTGTCGTg                                    <  1:772637/150‑1 (MQ=255)                                                                                                                         tACTGGACGTTCTCGTCGTAGATGTCCAGCTGGTAGCCCTTGCCGATCAGGCGCTCGGCCAGTTCCACCAGCGGGCTTTCGCGCAGGTCGTCGGTGCCGGCCTTGAAGCTCAGGCCCAGCAGGGCGACCTTGCGCTTGTCGTGGGCTTCg                             >  1:97242/1‑150 (MQ=255)                                                                                                                              gACGTTCTCGTCGTAGATGTCCAGCTGGTAGCCCTTGCCGATCAGGCGCTCGGCCAGTTCCACCAGCGGGCTTTCGCGCAGGTCGTCGGTGCCGGCCTTGAAGCTCAGGCCCAGCAGGGCGACCTTGCGCTTGTCGTGGGCTTCGATCAg                        >  1:387261/1‑150 (MQ=255)                                                                                                                                 gTTCTCGTCGTAGATGTCCAGCTGGTAGCCCTTGCCGATCAGGCGCTCGGCCAGTTCCACCAGCGGGCTTTCGCGCAGGTCGTCGGTGCCGGCCTTGAAGCTCAGGCCCAGCAGGGCGACCTTGCGCTTGTCGTGGGCTTCGATCAGCTc                     >  2:761893/1‑150 (MQ=255)                                                                                                                                 gTTCTCGTCGTAGATGTCCAGCTGGTAGCCCTTGCCGATCAGGCGCTCGGCCAGTTCCACCAGCGGGCTTTCGCGCAGGTCGTCGGTGCCGGCCTTGAAGCTCAGGCCCAGCAGGGCGACCTTGCGCTTGTCGTGGGCTTCGATCAGCTc                     >  1:552740/1‑150 (MQ=255)                                                                                                                                       gtcgtAGATGTCCAGCTGGTAGCCCTTGCCGATCAGGCGCTCGGCCAGTTCCACCAGCGGGCTTTCGCGCAGGTCGTCGGTGCCGGCCTTGAAGCTCAGGCCCAGCAGGGCGACCTTGCGCTTGTCGTGGGCTTCGATCAGCTCGAAGGc               >  1:422187/1‑150 (MQ=255)                                                                                                                                          gtAGATGTCCAGCTGGTAGCCCTTGCCGATCAGGCGCTCGGCCAGTTCCACCAGCGGGCTTTCGCGCAGGTCGTCGGTGCCGGCCTTGAAGCTCAGGCCCAGCAGGGCGACCTTGCGCTTGTCGTGGGCTTCGATCAGCTCGAAGGCGtt            >  1:41406/1‑150 (MQ=255)                                                                                                                                          gtAGATGTCCAGCAGGTGGCCCTTGCCGAGGAGGTTCTCGGCGCGTTCTGGGAGCGGGCTTTCGCGCAGGTCGGCGGTGCCGGCCGTGAAGCTCAGGCCCAGGAGGGGGACCTTGCGGTGGGCGTGGGCTTGGATCAGGTGGAAGGCggt            >  2:672663/1‑148 (MQ=255)                                                                                                                                                 tCCAGCTGGTAGCCCTTGCCGATCAGGCGCTCGGCCAGTTCCACCAGCGGGCTTTCGCGCAGGTCGTCGGTGCCGGCCTTGAAGCTCAGGCCCAGCAGGGCGACCTTGCGCTTGTCGTGGGCTTCGATCAGCTCGAAGGCGTTCTGCAcc     >  2:546246/1‑150 (MQ=255)                                                                                                                                                   cAGCTGGTAGCCCTTGCCGATCAGGCGCTCGGCCAGTTCCACCAGCGGGCTTTCGCGCAGGTCGTCGGTGCCGGCCTTGAAGCTCAGGCCCAGCAGGGCGACCTTGCGCTTGTCGTGGGCTTCGATCAGCTCGAAGGCGt             >  1:428039/1‑140 (MQ=255)                                                                                                                                                   cAGCTGGTAGCCCTTGCCGATCAGGCGCTCGGCCAGTTCCACCAGCGGGCTTTCGCGCAGGTCGTCGGTGCCGGCCTTGAAGCTCAGGCCCAGCAGGGCGACCTTGCGCTTGTCGTGGGCTTCGATCAGCTCGAAGGCGt             <  2:428039/140‑1 (MQ=255)                                                                                                                                                    aGCTGGTAGCCCTTGCCGATCAGGCGCTCGGCCAGTTCCACCAGCGGGCTTTCGCGCAGGTCGTCGGTGCCGGCCt                                                                            >  1:809713/1‑76 (MQ=255)                                                                                                                                                    aGCTGGTAGCCCTTGCCGATCAGGCGCTCGGCCAGTTCCACCAGCGGGCTTTCGCGCAGGTCGTCGGTGCCGGCCt                                                                            <  2:809713/76‑1 (MQ=255)                                                                                                                                                    aGCTGGTAGCCCTTGCCGATCAGGCGCTCGGCCAGTTCCACCAGCGGGCTTTCGCGCAGGTCGTCGGTGCCGGCCTTGAAGCTCAGGCCCAGCAGGGCGACCTTGCGCTTGTCGTGGGCTTCGATCAGCTCGAAGGCGTTCTGCACCTGc  <  2:387261/150‑1 (MQ=255)                                                                                                                                                    aGCTGGTAGCCCTTGCCGATCAGGCGCTCGGCCAGTTCCACCAGCGGGCTTTCGCGCAGGTCGTCGGTGCCGGCCTTGAAGCTCAGGCCCAGCAGGGCGACCTTGCGCTTGTCGTGGGCTTCGATCAGCTCGAAGGCGTTCTGCACCTGc  >  1:174032/1‑150 (MQ=255)                                                                                                                                                     |                                                                                                                                                     TTGCCGAGGACGATGATGTCGGCGTTGTCGATCACCTGCTGCAAGTTGGCGTTGAGCAGCGACGACACGTGCGGGATCTTCGACTCGATGTAGTCCTTGTTGGCGCCGTGAACACGGGCGTACTGGACGTTCTCGTCGTAGATGTCCAGCTGGTAGCCCTTGCCGATCAGGCGCTCGGCCAGTTCCACCAGCGGGCTTTCGCGCAGGTCGTCGGTGCCGGCCTTGAAGCTCAGGCCCAGCAGGGCGACCTTGCGCTTGTCGTGGGCTTCGATCAGCTCGAAGGCGTTCTGCACCTGC  >  NC_002947/1473035‑1473331

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.