New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1781623	35 (1.110)	3 (0.100)	3/240	NT	8.7%	coding (2496/2703 nt)	glnD	uridylyltransferase
	?	NC_002947	= 1781656	29 (0.950)					coding (2463/2703 nt)	glnD	uridylyltransferase

GACAGCGGCTGGTTGTCGGCATCGGTAATGAAGAACACGTCTTCTACCCGCTCGCCGAGGGTGGCGATCTTGGCGTTTTGCAGTGACAGGTCGAACTCCAGGAAGATCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1781513‑1781623 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcGCCAGACCGCCCGGGCCTGCTGGCCCGGCTGGGGCGGATC  <  NC_002947/1781656‑1781617                                                                                                                                                         GACAGCGGCTGGTTGTCGGCATCGGTAATGAAGAACACGTCTTCTACCCGCTCGCCGAGGGTGGCCTGATGTGCGTTTTGCAGTGACAGGTCGAACTCCAGGAAGATCCGCGCCAGACCGCCCGGGCCTGCTGGCCCGGCTGGGGCGGAT   <  1:480680/150‑1       GGCTGGTTGTCGGCATCGGTAATGAAGAACACGTCTTCTACCCGCTCGCCGAGGGTGGCGATCTTGGCGTTTTGCAGTGACAGGTCGAACTCCAGGAAGATCCGCGCCAGACCGCCCGGGCCTGCTGGCCCGGCTGGGGCGGATC  <  1:345446/145‑1       GGCTGGTTGTCGGCATCGGTAATGAAGAACACGTCTTCTACCCGCTCGCCGAGGGTGGCGATCTTGGCGTTTTGCAGTGACAGGTCGAACTCCAGGAAGATCCGCGCCAGACCGCCCGGGCCTGCTGGCCCGGCTGGGGCGGATC  >  2:345446/1‑145                                                                                                                                                         GACAGCGGCTGGTTGTCGGCATCGGTAATGAAGAACACGTCTTCTACCCGCTCGCCGAGGGTGGCGATCTTGGCGTTTTGCAGTGACAGGTCGAACTCCAGGAAGATCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1781513‑1781623 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgcGCCAGACCGCCCGGGCCTGCTGGCCCGGCTGGGGCGGATC  <  NC_002947/1781656‑1781617

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.