New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1858873	28 (0.880)	7 (0.230)	6/242	NT	20.5%	coding (2010/2259 nt)	PP_1661	dehydrogenase
	?	NC_002947	= 1858902	27 (0.870)					coding (2039/2259 nt)	PP_1661	dehydrogenase

TGCTCAAGCGCACCGTGCAGGTGCAGGCCAACCAGGCATGGCAGGGCACGGGCATGCAGGTCAATGGGCAGAGCTGGCAGTTGGCGGTATGCACGGGCGGGCAGTGGACGGCGAACCCGGCCACCGGCAT‑GGTTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1858737‑1858873 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcTTGGCGATCAACCTTGGGTTGCCCGCCGCGCCAACCATGCCGGTG  <  NC_002947/1858902‑1858858                                                                                                                                                                                         TGCTCAAGCGCACCGTGCAGGTGCAGGCCAACCAGGCATGGCAGGGCACGGGCATGCAGGTCAATGGGCAGAGCTGGCAGTTGGCGGTATGCACGGGCGGGCAGTGGACGGCGAACCCGGCCACCGGCATAGCCGGGCTTGGCGATCAAC                                   >  1:716284/1‑150                                 CAGGCATGGCAGGGCACGGGCATGCAGGTCAATGGGCAGAGCTGGCAGTTGGCGGTATGCACGGGCGGGCAGTGGACGGCGAACCCGGCCACCGGCATAGCCGGGCTTGGCGATCAACCTTGGGTTGCCCGCCGCGCCAACCATGCCGGa   <  2:716284/150‑2                                  AGGCATGGCAGGGCACGGGCATGCAGGTCAATGGGCAGAGCTGGCAGTTGGCGGTATGCACGGGCGGGCAGTGGACGGCGAACCCGGCCACCGGCATAGCCGGGCTTGGCGATCAACCTTGGGTTGCCCGCCGCGCCAACCATGCCGGTG  <  1:68276/150‑1                                           AGGGCACGGGCATGCAGGTCAATGGGCAGAGCTGGCAGTTGGCGGTATGCACGGGCGGGCAGTGGACGGCGAACCCGGCCACCGGCAT‑GGTTGGCTTGGCGATCAACCTTGGGTTGCCCGCCGC                  >  1:548620/1‑124                                           AGGGCACGGGCATGCAGGTCAATGGGCAGAGCTGGCAGTTGGCGGTATGCACGGGCGGGCAGTGGACGGCGAACCCGGCCACCGGCAT‑GGTTGGCTTGGCGATCAACCTTGGGTTGCCCGCCGC                  <  2:548620/124‑1                                                          AGGTCAATGGGCAGAGCTGGCAGTTGGCGGTATGCACGGGCGGGCAGTGGACGGCGAACCCGGCCACCGGCAT‑GGTTGGCTTGGCGATCAACCTTGGGTTGCCCGCCGCGCCAACCATG        >  1:292551/1‑119                                                          AGGTCAATGGGCAGAGCTGGCAGTTGGCGGTATGCACGGGCGGGCAGTGGACGGCGAACCCGGCCACCGGCAT‑GGTTGGCTTGGCGATCAACCTTGGGTTGCCCGCCGCGCCAACCATG        <  2:292551/119‑1                                                                                                                                                                                         TGCTCAAGCGCACCGTGCAGGTGCAGGCCAACCAGGCATGGCAGGGCACGGGCATGCAGGTCAATGGGCAGAGCTGGCAGTTGGCGGTATGCACGGGCGGGCAGTGGACGGCGAACCCGGCCACCGGCAT‑GGTTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1858737‑1858873 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcTTGGCGATCAACCTTGGGTTGCCCGCCGCGCCAACCATGCCGGTG  <  NC_002947/1858902‑1858858

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.