New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2447872 = | 31 (0.980) | 4 (0.130) | 4/238 | NT | 13.0% | coding (3254/3318 nt) | PP_2146 | SNF2/RAD54 family helicase |
? | NC_002947 | 2447915 = | 24 (0.790) | coding (3211/3318 nt) | PP_2146 | SNF2/RAD54 family helicase |
GGCAGCATTGGCCGCCAGCCTGCTGGACGGCGGGCAGGCTG‑‑GG‑CAATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2447919‑2447872 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caatgCTGCCTTTTCCTGCTGCAACAACTGGATCTTCTCTTCCACCGTACCCCGGGTAATCAGCTTGAACACGAACACCGGTTTGTCCTGGCCGATGCGGTAGGCACGGTCGGTAGC > NC_002947/2447915‑2448026 GGCAGCATTGGCCGCCAGCCTGCTGGACGGCGGGCAGGCTG‑‑GG‑CAATGCTGCCTTTTCCTGCTGCAACAACTGGATCTTCTCTTCCACCGTACCCCGGGTAATCAGCTTGAACACGAACACCGGTTTGTCCTGGC < 1:535504/135‑1 GGCAGCATTGGCCGCCAGCCTGCTGGACGGCGGGCAGGCTG‑‑GG‑CAATGCTGCCTTTTCCTGCTGCAACAACTGGATCTTCTCTTCCACCGTACCCCGGGTAATCAGCTTGAACACGAACACCGGTTTGTCCTGGC > 2:535504/1‑135 GCATTGGCCGCCAGCCTGCTGGACGGCGGGCAGGCTG‑‑GG‑CAATGCTGCCTTTTCCTGCTGCAACAACTGGATCTTCTCTTCCACCGTACCCCGGGTAATCAGCTTGAACACGAACACCGGTTTGTCCTGGCCGATGCGGTAGGCACGGTC > 1:597724/1‑150 GCCAGCCTGCTGGACGGCGGGCAGGCTGGCGGCCAATGCTGCCTTTTCCTGCTGCAACAACTGGATCTTCTCTTCCACCGTACCCCGGGTAATCAGCTTGAACACGAACACCGGTTTGTCCTGGCCGATGCGGTAGGCACGGTCGGTAGC > 1:817982/1‑150 GGCAGCATTGGCCGCCAGCCTGCTGGACGGCGGGCAGGCTG‑‑GG‑CAATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2447919‑2447872 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caatgCTGCCTTTTCCTGCTGCAACAACTGGATCTTCTCTTCCACCGTACCCCGGGTAATCAGCTTGAACACGAACACCGGTTTGTCCTGGCCGATGCGGTAGGCACGGTCGGTAGC > NC_002947/2447915‑2448026 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |