New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2486683 = | 40 (1.260) | 6 (0.200) | 5/232 | NT | 15.1% | coding (1232/1359 nt) | spuC‑I | polyamine:pyruvate transaminase |
? | NC_002947 | 2486716 = | 30 (1.010) | coding (1265/1359 nt) | spuC‑I | polyamine:pyruvate transaminase |
GCGATGATCATGGTGTCGCCTACAGCGCGCATGATCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2486719‑2486683 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catgatcaTCGCGCCACCGCTGGTGATCAGTATCGAAGAGATCGACGAACTGGTGGAGAAAGCCCGCAAGTGCCTGGACCTGACCTATGAGGCTGTTCGGTAACAGCAGAGGGCCTGGTTAGCTGTTCTCAG > NC_002947/2486716‑2486839 GCGATGATCATGGTGTCGCCTACAGCGCGCATGATCATCGCGCCACCGCTGGTGATCAGTATCGAAGAGATCGACGAACTGGTGGAGAAAGCCCGCAAGTGCCTGGACCTGACCTATGA > 1:825966/1‑119 GCGATGATCATGGTGTCGCCTACAGCGCGCATGATCATCGCGCCACCGCTGGTGATCAGTATCGAAGAGATCGACGAACTGGTGGAGAAAGCCCGCAAGTGCCTGGACCTGACCTATGA < 2:825966/119‑1 GCGATGATCATGGTGTCGCCTACAGCGCGCATGATCATCGCGCCACCGCTGGTGATCAGTATCGAAGAGATCGACGAACTGGTGGAGAAAG > 1:564376/1‑91 GCGATGATCATGGTGTCGCCTACAGCGCGCATGATCATCGCGCCACCGCTGGTGATCAGTATCGAAGAGATCGACGAACTGGTGGAGAAAG < 2:564376/91‑1 CATGGTGTCGCCTACAGCGCGCATGATCATCGCGCCACCGCTGGTGATCAGTATCGAAGAGATCGACGAACTGGTGGAGAAAGCCCGCAAGTGCCTGGACCTGACCTATGAGGCTGTTCGGTAACA > 1:161198/1‑126 CATGGTGTCGCCTACAGCGCGCATGATCATCGCGCCACCGCTGGTGATCAGTATCGAAGAGATCGACGAACTGGTGGAGAAAGCCCGCAAGTGCCTGGACCTGACCTATGAGGCTGTTCGGTAACA < 2:161198/126‑1 CATGATCATCGCGCCACCGCTGGTGATCAGCATCGAAGAGATCGACGAACTGGTGGAGAAAGCCCGCAAGTGCCTGGACCTGACCTATGAGGCTGTTCGGTAACAGCAGAGGGCCTGGTTAGCTGTTCTCAG > 1:268488/1‑132 CATGATCATCGCGCCACCGCTGGTGATCAGCATCGAAGAGATCGACGAACTGGTGGAGAAAGCCCGCAAGTGCCTGGACCTGACCTATGAGGCTGTTCGGTAACAGCAGAGGGCCTGGTTAGCTGTTCTCAG < 2:268488/132‑1 GCGATGATCATGGTGTCGCCTACAGCGCGCATGATCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2486719‑2486683 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catgatcaTCGCGCCACCGCTGGTGATCAGTATCGAAGAGATCGACGAACTGGTGGAGAAAGCCCGCAAGTGCCTGGACCTGACCTATGAGGCTGTTCGGTAACAGCAGAGGGCCTGGTTAGCTGTTCTCAG > NC_002947/2486716‑2486839 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |