New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2486683 =	40 (1.260)	6 (0.200)	5/232	NT	15.1%	coding (1232/1359 nt)	spuC‑I	polyamine:pyruvate transaminase
	?	NC_002947	2486716 =	30 (1.010)					coding (1265/1359 nt)	spuC‑I	polyamine:pyruvate transaminase

GAACTGGCCGACCACCCGCTGGTAGGCGAAGTGCGCGGCCTGGGCATGCTCGGTGCGATCGAGTTGGTGAAAGACAAGGCCACCCGTGCCCGTCATGAAGGCAAAGGTGTCGGCATGATCTG‑TCGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCATCGCGCCACCGCTGGTGATCAGTATCGAAGAGATCGACGAACTGGTGGAGAAAGCCCGCAAGTGCCTGGACCTGACCTATGAGGCTGTTCGGTAACAGCAGAGGGCCTG  >  NC_002947/2486535‑2486824                                                                                                                                                      |                                                                                                                                              gAACTGGCCGACCACCCGCTGGTAGGCGAAGTGCGCGGCCTGGGCATGCTCGGTGCGATCGAGTTGGTGAAAGACAAGGCCACCCGTGCCCGTCATGAAGGCAAAGGTGTCGGCATGATCTG‑TCGCCAGCACTGCTTCGACAACGGCCTg                                                                                                                                              <  1:56383/150‑1 (MQ=255)  aaCTGGCCGACCACCCGCTGGTAGGCGAAGTGCGCGGCCTGGGCATGCTCGGTGCGATCGAGTTGGTGAAAGACAAGGCCACCCGTGCCCGTCATGAAGGCAAAGGTGTCGGCATGATCTG‑TCGCCAGCACTGCTTCGACAACGGCCTGa                                                                                                                                             <  2:840302/150‑1 (MQ=255)         cGACCACCCGCTGGTAGGCGAAGTGCGCGGCCTGGGCATGCTCGGTGCGATCGAGTTGGTGAAAGACAAGGCCACCCGTGCCCGTCATGAAGGCAAAGGTGTCGGCATGATCTG‑TCGCCAGCACTGCTTCGACAACGGCCTGATCATggt                                                                                                                                      >  1:513702/1‑148 (MQ=255)            ccaccCGCTGGTAGGCGAAGTGCGCGGCCTGGGCATGCTCGGTGCGATCGAGTTGGTGAAAGACAAGGCCACCCGTGCCCGTCATGAAGGCAAAGGTGTCGGCATGATCTG‑TCGCCAGCACTGCTTCGACAACGGCCTGATCATgcgcgc                                                                                                                                   <  2:779267/150‑1 (MQ=255)                ccGCTGGTAGGCGAAGTGCGCGGCCTGGGCATGCTCGGTGCGATCGAGTTGGTGAAAGACAAGGCCACCCGTGCCCGTCATGAAGGCAAAGGTGTCGGCATGATCTG‑TCGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTa                                                                                                                               <  1:428149/150‑1 (MQ=255)                ccGCTGGTAGGCGAAGTGCGCGGCCTGGGCATGCTCGGGGCGAACAAGTTGATGAAAGACAAGGCCACCCGTGCTTTTCATGAAGGCAAAGGTGTCGGCATGATCTG‑TCGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTa                                                                                                                               <  1:616092/150‑1 (MQ=38)                          ctgagaacagctaaccaggccctctgctgttaccgaacagcctcataggtcaggtccaggcacttgcgggctttctccaccagttcgtcgatctcttcgatgctgatcaccagcggtggcgcgaTGATCATg                                                                                                                                        <  2:268488‑M1/8‑1 (MQ=255)                          ctgagaacagctaaccaggccctctgctgttaccgaacagcctcataggtcaggtccaggcacttgcgggctttctccaccagttcgtcgatctcttcgatgctgatcaccagcggtggcgcgaTGATCATg                                                                                                                                        >  1:268488‑M1/125‑132 (MQ=255)                                tGCGCGGCCTGGGCATGCTCGGTGCGATCGAGTTGGTGAAAGACAAGGCCACCCGTGCCCGTCATGAAGGCAAAGGTGTCGGCATGATCTG‑TCGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGatca                                                                                                               >  2:832742/1‑150 (MQ=255)                                   gcgGCCTGGGCATGCTCGGTGCGACCGAGTTGGTCAAAGACACGGCCACCCGTGCCCGTCATGAAGGCAAAGGTGTCGGCATGATCTG‑TCGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGGTCATcg                                                                                                            <  2:695712/150‑1 (MQ=255)                                      gCCCGGGCATGCTCGGTGCGATCGAGTTGGTGAAAGACAAGGCCACCCGTGCCCGTCATGAAGGCAAATGTGTCGGAATGATCTG‑TCGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCATCgcgc                                                                                                         <  1:182015/150‑1 (MQ=255)                                                  tCGGTGCGATCGAGTTGGTGAAAGACAAGGCCACCCGTGCCCGTCATGAAGGCAAAGGTGTCGGCATGATCTG‑TCGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCATcgc                                                                                                           >  1:449072/1‑136 (MQ=255)                                                  tCGGTGCGATCGAGTTGGTGAAAGACAAGGCCACCCGTGCCCGTCATGAAGGCAAAGGTGTCGGCATGATCTG‑TCGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCATcgc                                                                                                           <  2:449072/136‑1 (MQ=255)                                                     tgttaccgaacagcctcataggtcaggtccaggcacttgcgggctttctccaccagttcgtcgatctcttcgatactgatcaccagcggtggcgcgaTGATCATGCGCGCTGTAGGCGACACCATg                                                                                                                   >  1:161198‑M1/98‑126 (MQ=255)                                                     tgttaccgaacagcctcataggtcaggtccaggcacttgcgggctttctccaccagttcgtcgatctcttcgatactgatcaccagcggtggcgcgaTGATCATGCGCGCTGTAGGCGACACCATg                                                                                                                   <  2:161198‑M1/29‑1 (MQ=255)                                                     gTGCGATCGAGTTGGTGAAAGACAAGGCCACCCGTGCCCGTCATGAAGGCAAAGGTGTCGGCATGATCTG‑TCGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCATCGCGCCACCGCTGGTGATCa                                                                                          <  1:832742/150‑1 (MQ=255)                                                     gTGCGATCGAGTTGGTGAAAGACAAGGCCACCCGTGCCCATCATGAAGGCAAAGGTGTCTTCATGATCTG‑TCGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCATCGCGCCACCGCTGGTGATCa                                                                                          <  1:225752/150‑1 (MQ=255)                                                      tGCGATCGAGTTGGTGAAAGACAAGGCCACCCGTGCCCGTCATGAAGGCAAAGGTGTCGGCATGATCTG‑TCGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCATCGCGCCACCGCTGGTGATCAg                                                                                         >  1:401356/1‑150 (MQ=255)                                                             gAGTTGGTGAAAGACAAGGCCACCCGTGCCCGTCATGAAGGCAAAGGTGTCGGCATGATCTG‑TCGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCATCGCGCCACCGCTGGTGATCAGTATCGaa                                                                                  <  2:333278/150‑1 (MQ=255)                                                               gTTGGTGAAAGACAAGGCCACCCGTGCCCGTCATGAAGGCAAAGGTGTCGGCATGATCTG‑TCGCCAGCACTGCTTCGACAACGGCCCAATCATGCGCGCTGTAGGCGACACCATGATCATCGCGCCACCGCTGGTGATCAGTATCGAaga                                                                                <  2:291219/150‑1 (MQ=255)                                                                    tcataggtcaggtccaggcacttgcgggctttctccaccagttcgtcgatctcttcgatactgatcaccagcggtggcgcgaTGATCATGCGCGCTGTAGGCGACACCATGATCATcgc                                                                                                           >  1:825966‑M1/83‑119 (MQ=255)                                                                    tcataggtcaggtccaggcacttgcgggctttctccaccagttcgtcgatctcttcgatactgatcaccagcggtggcgcgaTGATCATGCGCGCTGTAGGCGACACCATGATCATcgc                                                                                                           <  2:825966‑M1/37‑1 (MQ=255)                                                                    tGAAAGACAAGGCCACCCGTGCCCGTCATGAAGGCAAAGGTGTCGGCATGATCTG‑TCGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCATCGCGCCACCGCTGGTGATCAGTATCGAAGAGATcg                                                                           >  2:765442/1‑150 (MQ=255)                                                                     gAAAGACAAGGCCACCCGTGCCCGTCATGAAGGCAAAGGTGTCGGCATGATCTG‑TCGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCATCGCGCCACCGCTGGTGATCAGTATCGAAGAGATcga                                                                          <  1:718148/150‑1 (MQ=255)                                                                     gAAAGACAAGGCCACCCGTGCCCGTCATGAAGGCAAAGGTGTCAAC‑GGCGCGGCATGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCATCGCGCCACCGCTGGTGATCAGTATCGAAGAGATcga                                                                          <  2:22934/150‑1 (MQ=37)                                                                      aaaGACAAGGCCACCCGTGCCCGTCATGAAGGCAAAGGTGTCGGCATGATCTG‑TCGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCATCGCGCCACCGCTGGTGATCAGTATCGAAGAGATcgac                                                                         <  2:401356/150‑1 (MQ=255)                                                                             aGGCCACCCGTGCCCGTCATGAAGGCAAAGGTGTCGGCATGATCTG‑TCGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCATCGCGCCACCGCTGGTGATCAGTATCGAAGAGATCGACGAACtgg                                                                  <  1:765442/150‑1 (MQ=255)                                                                              ggCCACCCGTGCCCGTCATGAAGGCAAAGGTGTCGGCATGATCTG‑TCGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCATCGCGCCACCGCTGGTGATCAGTATCGAAGAGATCGACGAACtggt                                                                 >  1:186117/1‑150 (MQ=255)                                                                                               aTGAAGGCAAAGGTGTCGGCATGATCTG‑TCGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCATCGCGCCACCGCTGGTGATCAGTATCGAAGAGATCGACGAACTGGTGGAGAAAGCCCGc                                                    >  1:618969/1‑146 (MQ=255)                                                                                               aTGAAGGCAAAGGTGTCGGCATGATCTG‑TCGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCATCGCGCCACCGCTGGTGATCAGTATCGAAGAGATCGACGAACTGGTGGAGAAAGCCCGc                                                    <  2:618969/146‑1 (MQ=255)                                                                                                ctttctccaccagttcgtcgatctcttcgatactgatcaccagcggtggcgcgaTGATCATGCGCGCTGTAGGCGACACCATGATCATcgc                                                                                                           >  1:564376‑M1/55‑91 (MQ=255)                                                                                                ctttctccaccagttcgtcgatctcttcgatactgatcaccagcggtggcgcgaTGATCATGCGCGCTGTAGGCGACACCATGATCATcgc                                                                                                           <  2:564376‑M1/37‑1 (MQ=255)                                                                                                  aaGGCAAAGGTGTCGGCATGATCTG‑TCGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTa                                                                                                                               <  1:596143/68‑1 (MQ=255)                                                                                                  aaGGCAAAGGTGTCGGCATGATCTG‑TCGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTa                                                                                                                               >  2:596143/1‑68 (MQ=255)                                                                                                   aGGCAAAGGTGTCGGCATGATCTG‑TCGCCAGCACTGCTTCGACAACGGCCTGATCATGTGCGCTGTAGGCGACACCATGATCATCGCGCCACCGCTGGTGATCAGTATCGAAGAGATCGACGAACTGGTGGAGCAAGCCCCCAAGTGCCt                                            <  2:825575/150‑1 (MQ=255)                                                                                                    ggCAAAGGTGTCGGCATGATCTG‑TCGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCATCGCGCCACCGCTGGTGATCAGTATCGAAGAGATCGACGAACTGGTGGAGAAAGCCCGCAAGTGCCTg                                           <  2:186117/150‑1 (MQ=255)                                                                                                         aGGTGTCGGCATGATCTG‑TCGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCATCGCGCCACCGCTGGTGATCAGTATCGAAGAGATCGACGAACTGGTGGAGAAAGCCCGCAAGTGCCTGgacct                                      >  2:781173/1‑150 (MQ=255)                                                                                                              tCGGCATGATCTG‑TCGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCATCGCGCCACCGCTGGTGATCAGTATCGAAGAGATCGACGAACTGGTGGAGAAAGCCCGCAAGTGCCTGgacctgacct                                 >  1:563630/1‑150 (MQ=255)                                                                                                                    tGATCTG‑TCGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCATCGCGCCACCGCTGGTGATCAGTATCGAAGAGATCGACGAACTGGTGGAGAAAGCCCGCAAGTGCCt                                            <  2:792357/133‑1 (MQ=255)                                                                                                                    tGATCTG‑TCGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCATCGCGCCACCGCTGGTGATCAGTATCGAAGAGATCGACGAACTGGTGGAGAAAGCCCGCAAGTGCCt                                            >  1:792357/1‑133 (MQ=255)                                                                                                                       tCTG‑TCGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCATCGCGCCACCGCTGGTGATCAGTATCGAAGAGATCGACGAACTGGTGGAGAAAGCCCGCAAGTGCCTGGACCTGACCTATGAGGCTg                        <  1:184763/150‑1 (MQ=255)                                                                                                                            tCGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCATCGCGCCACCGCTGGTGATCAGTATCGAAGAGATc                                                                            >  2:148383/1‑94 (MQ=255)                                                                                                                            tCGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCATCGCGCCACCGCTGGTGATCAGTATCGAAGAGATc                                                                            <  1:148383/94‑1 (MQ=255)                                                                                                                              gCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCATCGCGCCACCGCTGGTGATCAGTATCGAAGAGATCGACGAACTGGTGGAGAAAGCCCGCAAGTGCCTGGACCTGACCTATGAGGCTGTTCGGt                  >  2:766737/1‑150 (MQ=255)                                                                                                                               ccAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCATCGCGCCACCGCTGGTGATCAGTATCGAAGAGATCGACGAACTGGTGGAGAAAGCCCGCAAGTGCCTGGACCTGACCTATGAGGCTGTTCGGTa                 <  2:622900/150‑1 (MQ=255)                                                                                                                                cAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCATCGCGCCACCGCTGGTGATCAGTATCGAAGAGATCGACGAACTGGTGGAGAAAGCCCGCAAGTGCCTGGACCTGACCTATGAGGCTGTTCGGTaa                >  2:403833/1‑150 (MQ=255)                                                                                                                                           cGACAACGGCCTGACCATGCGCGCTGTAGGCGACACCATGATCATCGCGCCACCGCTGGTGATCAGTATCGAAGAGATCGACGAACTGGTGGAGAAAGCCCGCAAGTGCCTg                                           <  1:139881/112‑1 (MQ=255)                                                                                                                                           cGACAACGGCCTGACCATGCGCGCTGTAGGCGACACCATGATCATCGCGCCACCGCTGGTGATCAGTATCGAAGAGATCGACGAACTGGTGGAGAAAGCCCGCAAGTGCCTg                                           >  2:139881/1‑112 (MQ=255)                                                                                                                                             aCAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCATCGCGCCACCGCTGGTGATCAGTATCGAAGAGATCGACGAACTGGTGGAGAAAGCCCGCAAGTGCCTGG‑CCTGACCTATGAGGCTGTTCGGTAACAGCAGAGGGCCTg  <  1:829725/150‑1 (MQ=255)                                                                                                                                              cAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCATCGCGCCACCGCTGGTGATCAGTATCGAAGAGATCGACGAACTGGTGGAGAAAGCCCGCAAGTGCCTGGACCTGACCTATGAGGCTGTTCGGTAACAGCAGAGGGCCTg  <  2:563630/150‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                              GAACTGGCCGACCACCCGCTGGTAGGCGAAGTGCGCGGCCTGGGCATGCTCGGTGCGATCGAGTTGGTGAAAGACAAGGCCACCCGTGCCCGTCATGAAGGCAAAGGTGTCGGCATGATCTG‑TCGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCATCGCGCCACCGCTGGTGATCAGTATCGAAGAGATCGACGAACTGGTGGAGAAAGCCCGCAAGTGCCTGGACCTGACCTATGAGGCTGTTCGGTAACAGCAGAGGGCCTG  >  NC_002947/2486535‑2486824

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.