New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2486683 =	40 (1.260)	6 (0.200)	5/232	NT	15.1%	coding (1232/1359 nt)	spuC‑I	polyamine:pyruvate transaminase
	?	NC_002947	2486716 =	30 (1.010)					coding (1265/1359 nt)	spuC‑I	polyamine:pyruvate transaminase

GCGGCCTGGGCATGCTCGGTGCGATCGAGTTGGTGAAAGACAAGGCCACCCGTGCCCGTCATGAAGGCAAAGGTGTCGGCATGATCTG‑TCGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCATCGCGCCACCGCTGGTGATCAGTATCGAAGAGATCGACGAACTGGTGGAGAAAGCCCGCAAGTGCCTGGACCTGACCTATGAGGCTGTTCGGTAACAGCAGAGGGCCTGGTTAGCTGTTCTCAGCACCTGTGAGATCAAG  >  NC_002947/2486569‑2486855                                                                                                                                                     |                                                                                                                                            gcgGCCTGGGCATGCTCGGTGCGACCGAGTTGGTCAAAGACACGGCCACCCGTGCCCGTCATGAAGGCAAAGGTGTCGGCATGATCTG‑TCGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGGTCATcg                                                                                                                                           <  2:695712/150‑1 (MQ=255)    gCCCGGGCATGCTCGGTGCGATCGAGTTGGTGAAAGACAAGGCCACCCGTGCCCGTCATGAAGGCAAATGTGTCGGAATGATCTG‑TCGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCATCgcgc                                                                                                                                        <  1:182015/150‑1 (MQ=255)                tCGGTGCGATCGAGTTGGTGAAAGACAAGGCCACCCGTGCCCGTCATGAAGGCAAAGGTGTCGGCATGATCTG‑TCGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCATcgc                                                                                                                                          <  2:449072/136‑1 (MQ=255)                tCGGTGCGATCGAGTTGGTGAAAGACAAGGCCACCCGTGCCCGTCATGAAGGCAAAGGTGTCGGCATGATCTG‑TCGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCATcgc                                                                                                                                          >  1:449072/1‑136 (MQ=255)                   gTGCGATCGAGTTGGTGAAAGACAAGGCCACCCGTGCCCGTCATGAAGGCAAAGGTGTCGGCATGATCTG‑TCGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCATCGCGCCACCGCTGGTGATCa                                                                                                                         <  1:832742/150‑1 (MQ=255)                   gTGCGATCGAGTTGGTGAAAGACAAGGCCACCCGTGCCCATCATGAAGGCAAAGGTGTCTTCATGATCTG‑TCGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCATCGCGCCACCGCTGGTGATCa                                                                                                                         <  1:225752/150‑1 (MQ=255)                    tGCGATCGAGTTGGTGAAAGACAAGGCCACCCGTGCCCGTCATGAAGGCAAAGGTGTCGGCATGATCTG‑TCGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCATCGCGCCACCGCTGGTGATCAg                                                                                                                        >  1:401356/1‑150 (MQ=255)                           gAGTTGGTGAAAGACAAGGCCACCCGTGCCCGTCATGAAGGCAAAGGTGTCGGCATGATCTG‑TCGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCATCGCGCCACCGCTGGTGATCAGTATCGaa                                                                                                                 <  2:333278/150‑1 (MQ=255)                             gTTGGTGAAAGACAAGGCCACCCGTGCCCGTCATGAAGGCAAAGGTGTCGGCATGATCTG‑TCGCCAGCACTGCTTCGACAACGGCCCAATCATGCGCGCTGTAGGCGACACCATGATCATCGCGCCACCGCTGGTGATCAGTATCGAaga                                                                                                               <  2:291219/150‑1 (MQ=255)                                  tcataggtcaggtccaggcacttgcgggctttctccaccagttcgtcgatctcttcgatactgatcaccagcggtggcgcgaTGATCATGCGCGCTGTAGGCGACACCATGATCATcgc                                                                                                                                          <  2:825966‑M1/37‑1 (MQ=255)                                  tcataggtcaggtccaggcacttgcgggctttctccaccagttcgtcgatctcttcgatactgatcaccagcggtggcgcgaTGATCATGCGCGCTGTAGGCGACACCATGATCATcgc                                                                                                                                          >  1:825966‑M1/83‑119 (MQ=255)                                  tGAAAGACAAGGCCACCCGTGCCCGTCATGAAGGCAAAGGTGTCGGCATGATCTG‑TCGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCATCGCGCCACCGCTGGTGATCAGTATCGAAGAGATcg                                                                                                          >  2:765442/1‑150 (MQ=255)                                   gAAAGACAAGGCCACCCGTGCCCGTCATGAAGGCAAAGGTGTCGGCATGATCTG‑TCGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCATCGCGCCACCGCTGGTGATCAGTATCGAAGAGATcga                                                                                                         <  1:718148/150‑1 (MQ=255)                                   gAAAGACAAGGCCACCCGTGCCCGTCATGAAGGCAAAGGTGTCAAC‑GGCGCGGCATGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCATCGCGCCACCGCTGGTGATCAGTATCGAAGAGATcga                                                                                                         <  2:22934/150‑1 (MQ=37)                                    aaaGACAAGGCCACCCGTGCCCGTCATGAAGGCAAAGGTGTCGGCATGATCTG‑TCGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCATCGCGCCACCGCTGGTGATCAGTATCGAAGAGATcgac                                                                                                        <  2:401356/150‑1 (MQ=255)                                           aGGCCACCCGTGCCCGTCATGAAGGCAAAGGTGTCGGCATGATCTG‑TCGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCATCGCGCCACCGCTGGTGATCAGTATCGAAGAGATCGACGAACtgg                                                                                                 <  1:765442/150‑1 (MQ=255)                                            ggCCACCCGTGCCCGTCATGAAGGCAAAGGTGTCGGCATGATCTG‑TCGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCATCGCGCCACCGCTGGTGATCAGTATCGAAGAGATCGACGAACtggt                                                                                                >  1:186117/1‑150 (MQ=255)                                                             aTGAAGGCAAAGGTGTCGGCATGATCTG‑TCGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCATCGCGCCACCGCTGGTGATCAGTATCGAAGAGATCGACGAACTGGTGGAGAAAGCCCGc                                                                                   >  1:618969/1‑146 (MQ=255)                                                             aTGAAGGCAAAGGTGTCGGCATGATCTG‑TCGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCATCGCGCCACCGCTGGTGATCAGTATCGAAGAGATCGACGAACTGGTGGAGAAAGCCCGc                                                                                   <  2:618969/146‑1 (MQ=255)                                                              ctttctccaccagttcgtcgatctcttcgatactgatcaccagcggtggcgcgaTGATCATGCGCGCTGTAGGCGACACCATGATCATcgc                                                                                                                                          <  2:564376‑M1/37‑1 (MQ=255)                                                              ctttctccaccagttcgtcgatctcttcgatactgatcaccagcggtggcgcgaTGATCATGCGCGCTGTAGGCGACACCATGATCATcgc                                                                                                                                          >  1:564376‑M1/55‑91 (MQ=255)                                                                 aGGCAAAGGTGTCGGCATGATCTG‑TCGCCAGCACTGCTTCGACAACGGCCTGATCATGTGCGCTGTAGGCGACACCATGATCATCGCGCCACCGCTGGTGATCAGTATCGAAGAGATCGACGAACTGGTGGAGCAAGCCCCCAAGTGCCt                                                                           <  2:825575/150‑1 (MQ=255)                                                                  ggCAAAGGTGTCGGCATGATCTG‑TCGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCATCGCGCCACCGCTGGTGATCAGTATCGAAGAGATCGACGAACTGGTGGAGAAAGCCCGCAAGTGCCTg                                                                          <  2:186117/150‑1 (MQ=255)                                                                       aGGTGTCGGCATGATCTG‑TCGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCATCGCGCCACCGCTGGTGATCAGTATCGAAGAGATCGACGAACTGGTGGAGAAAGCCCGCAAGTGCCTGgacct                                                                     >  2:781173/1‑150 (MQ=255)                                                                            tCGGCATGATCTG‑TCGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCATCGCGCCACCGCTGGTGATCAGTATCGAAGAGATCGACGAACTGGTGGAGAAAGCCCGCAAGTGCCTGgacctgacct                                                                >  1:563630/1‑150 (MQ=255)                                                                                  tGATCTG‑TCGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCATCGCGCCACCGCTGGTGATCAGTATCGAAGAGATCGACGAACTGGTGGAGAAAGCCCGCAAGTGCCt                                                                           <  2:792357/133‑1 (MQ=255)                                                                                  tGATCTG‑TCGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCATCGCGCCACCGCTGGTGATCAGTATCGAAGAGATCGACGAACTGGTGGAGAAAGCCCGCAAGTGCCt                                                                           >  1:792357/1‑133 (MQ=255)                                                                                     tCTG‑TCGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCATCGCGCCACCGCTGGTGATCAGTATCGAAGAGATCGACGAACTGGTGGAGAAAGCCCGCAAGTGCCTGGACCTGACCTATGAGGCTg                                                       <  1:184763/150‑1 (MQ=255)                                                                                          tCGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCATCGCGCCACCGCTGGTGATCAGTATCGAAGAGATc                                                                                                           >  2:148383/1‑94 (MQ=255)                                                                                          tCGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCATCGCGCCACCGCTGGTGATCAGTATCGAAGAGATc                                                                                                           <  1:148383/94‑1 (MQ=255)                                                                                            gCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCATCGCGCCACCGCTGGTGATCAGTATCGAAGAGATCGACGAACTGGTGGAGAAAGCCCGCAAGTGCCTGGACCTGACCTATGAGGCTGTTCGGt                                                 >  2:766737/1‑150 (MQ=255)                                                                                             ccAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCATCGCGCCACCGCTGGTGATCAGTATCGAAGAGATCGACGAACTGGTGGAGAAAGCCCGCAAGTGCCTGGACCTGACCTATGAGGCTGTTCGGTa                                                <  2:622900/150‑1 (MQ=255)                                                                                              cAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCATCGCGCCACCGCTGGTGATCAGTATCGAAGAGATCGACGAACTGGTGGAGAAAGCCCGCAAGTGCCTGGACCTGACCTATGAGGCTGTTCGGTaa                                               >  2:403833/1‑150 (MQ=255)                                                                                                         cGACAACGGCCTGACCATGCGCGCTGTAGGCGACACCATGATCATCGCGCCACCGCTGGTGATCAGTATCGAAGAGATCGACGAACTGGTGGAGAAAGCCCGCAAGTGCCTg                                                                          >  2:139881/1‑112 (MQ=255)                                                                                                         cGACAACGGCCTGACCATGCGCGCTGTAGGCGACACCATGATCATCGCGCCACCGCTGGTGATCAGTATCGAAGAGATCGACGAACTGGTGGAGAAAGCCCGCAAGTGCCTg                                                                          <  1:139881/112‑1 (MQ=255)                                                                                                           aCAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCATCGCGCCACCGCTGGTGATCAGTATCGAAGAGATCGACGAACTGGTGGAGAAAGCCCGCAAGTGCCTGG‑CCTGACCTATGAGGCTGTTCGGTAACAGCAGAGGGCCTg                                 <  1:829725/150‑1 (MQ=255)                                                                                                            cAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCATCGCGCCACCGCTGGTGATCAGTATCGAAGAGATCGACGAACTGGTGGAGAAAGCCCGCAAGTGCCTGGACCTGACCTATGAGGCTGTTCGGTAACAGCAGAGGGCCTg                                 <  2:563630/150‑1 (MQ=255)                                                                                                                gcgatgatcatggtgtcgcctacagcgcgcatgatcaTCGCGCCACCGCTGGTGATCAGTATCGAAGAGATCGACGAACTGGTGGAGAAAg                                                                                        <  2:564376‑M2/54‑1 (MQ=255)                                                                                                                gcgatgatcatggtgtcgcctacagcgcgcatgatcaTCGCGCCACCGCTGGTGATCAGTATCGAAGAGATCGACGAACTGGTGGAGAAAg                                                                                        >  1:564376‑M2/38‑91 (MQ=255)                                                                                                                gcgatgatcatggtgtcgcctacagcgcgcatgatcaTCGCGCCACCGCTGGTGATCAGTATCGAAGAGATCGACGAACTGGTGGAGAAAGCCCGCAAGTGCCTGGACCTGACCTATGa                                                            >  1:825966‑M2/38‑119 (MQ=255)                                                                                                                gcgatgatcatggtgtcgcctacagcgcgcatgatcaTCGCGCCACCGCTGGTGATCAGTATCGAAGAGATCGACGAACTGGTGGAGAAAGCCCGCAAGTGCCTGGACCTGACCTATGa                                                            <  2:825966‑M2/82‑1 (MQ=255)                                                                                                                        catggtgtcgcctacagcgcgcatgatcaTCGCGCCACCGCTGGTGATCAGTATCGAAGAGATCGACGAACTGGTGGAGAAAGCCCGCAAGTGCCTGGACCTGACCTATGAGGCTGTTCGGTAAca                                             <  2:161198‑M2/97‑1 (MQ=255)                                                                                                                        catggtgtcgcctacagcgcgcatgatcaTCGCGCCACCGCTGGTGATCAGTATCGAAGAGATCGACGAACTGGTGGAGAAAGCCCGCAAGTGCCTGGACCTGACCTATGAGGCTGTTCGGTAAca                                             >  1:161198‑M2/30‑126 (MQ=255)                                                                                                                                          cacCATGATCATCGCGCCACCGCTGGTGATCAGTATCGAAGAGATCGACGAACTGGTGGAGAAAGCCCGCAAGTGCCTGGACCTGACCTATGAGGCTGTTCGGTAACAGCAGAGGGCCTGGTTAGCTGTTCTCAGCACCTGTGAGATCaa   <  1:781173/150‑1 (MQ=255)                                                                                                                                           acCATGATCATCGCGCCACCGCTGGTGATCAGTATCGAAGAGATCGACGAACTGGTGGAGAAAGCCCGCAAGTGCCTGGACCTGACCTATGAGGCTGTTCGGTAACAGCAGAGGGCCTGGTTAGCTGTTCTCAGCACCTGTGAGATCAAg  >  1:796824/1‑150 (MQ=255)                                                                                                                                           acCATGATCATCGCGCCACCGCTGGTGATCAGTATCGAAGAGATCGACGAACTGGTGGAGAAAGCCCGCAAGTGCCTGGACCTGACCTATGAGGCTGTTCGGTAACAGCAGAGGGCCTGGTTAGCTGTTCTCAGCACCTGTGAGATCAAg  <  1:403833/150‑1 (MQ=255)                                                                                                                                             catgatcaTCGCGCCACCGCTGGTGATCAGCATCGAAGAGATCGACGAACTGGTGGAGAAAGCCCGCAAGTGCCTGGACCTGACCTATGAGGCTGTTCGGTAACAGCAGAGGGCCTGGTTAGCTGTTCTCAg                  <  2:268488‑M2/124‑1 (MQ=255)                                                                                                                                             catgatcaTCGCGCCACCGCTGGTGATCAGCATCGAAGAGATCGACGAACTGGTGGAGAAAGCCCGCAAGTGCCTGGACCTGACCTATGAGGCTGTTCGGTAACAGCAGAGGGCCTGGTTAGCTGTTCTCAg                  >  1:268488‑M2/9‑132 (MQ=255)                                                                                                                                                     |                                                                                                                                            GCGGCCTGGGCATGCTCGGTGCGATCGAGTTGGTGAAAGACAAGGCCACCCGTGCCCGTCATGAAGGCAAAGGTGTCGGCATGATCTG‑TCGCCAGCACTGCTTCGACAACGGCCTGATCATGCGCGCTGTAGGCGACACCATGATCATCGCGCCACCGCTGGTGATCAGTATCGAAGAGATCGACGAACTGGTGGAGAAAGCCCGCAAGTGCCTGGACCTGACCTATGAGGCTGTTCGGTAACAGCAGAGGGCCTGGTTAGCTGTTCTCAGCACCTGTGAGATCAAG  >  NC_002947/2486569‑2486855

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.