New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 257577746 (1.450)3 (0.100) 3/238 NT 6.4% coding (911/1689 nt) PP_2258 sensory box protein
?NC_002947 = 2575803 43 (1.420)coding (937/1689 nt) PP_2258 sensory box protein

GCGTGACCCTGTACCCGCAGGATGACGAAGATGCCGACACCCTGGTGCGCCACGCCGACCAGGCCATGTATGTGGCCAAGCAGCGCGGGCGCAACCGTTACCACCTGTTCGACGTGTCGCAGGAACAGGAACTCAAGGCCACCCACCAGACCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2575624‑2575777
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accgtTGCGCAGCGCCCGGCGCACGCGCGCCACGGTCTGGTGGGTGGCCTTGAGTTCCTGTTCCTGCGACACGTCGAACAGGTGGTAACGGTTGCGCCCGCGCTGCTTGGCCACATACATGGCCTGGTCGGCGTGGCGCACCAGGGTGTC  <  NC_002947/2575803‑2575659
                                                                                                                                                                                                                                                                                                           
GCGTGACCCTGTACCCGAAGGATGACGAAGATGCCGACACCCTGGTGCGCCACGCCGACCAGGCCATGTATGTGGCCAAGCAGCGCGGGCGCAACCGTTACCACCTGTTCGACGTGTCGCAGGAACAGGAACTCAAGGCCACCCACCAGA                                                                                                                                                       <  2:703517/150‑1
                                       CCCTGGTGCGCCACGCCGACCAGGCCATGTATGTGGCCAAGCAGCGCGGGCGCAACCGTTACCACCTGTTCGACGTGTCGCAGGAACAGGAACTCAAGGCCACCCACCAGACCGTTGCGCAGCGCCCGGCGCACGCGCGCCACGGTCTGG                                                                                                                <  1:559197/150‑1
                                                                                                      ACCTGTTCGACGTGTCGCAGGAACAGGAACTCAAGGCCACCCACCAGACCGTTGCGCAGCGCCCGGCGCACGCGCGCCACGGTC                                                                                                                   <  1:528573/84‑1
                                                                                                      ACCTGTTCGACGTGTCGCAGGAACAGGAACTCAAGGCCACCCACCAGACCGTTGCGCAGCGCCCGGCGCACGCGCGCCACGGTC                                                                                                                   >  2:528573/1‑84
                                                                                                                                                     ACCGTTGCGCAGCGCCCGGCGCACGCGCGCCACGGTCTGGTGGGTGGCCTTGAGTTCCTGTTCCTGCGACACGTCGAACAGGTGGTAACGGTTGCGCCCGCGCTGCTTGGCCACATACATGGCCTGGTCGGCGTGGCGCACCAGGGTGTC  <  1:460527/150‑1
                                                                                                                                                                                                                                                                                                           
GCGTGACCCTGTACCCGCAGGATGACGAAGATGCCGACACCCTGGTGCGCCACGCCGACCAGGCCATGTATGTGGCCAAGCAGCGCGGGCGCAACCGTTACCACCTGTTCGACGTGTCGCAGGAACAGGAACTCAAGGCCACCCACCAGACCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2575624‑2575777
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accgtTGCGCAGCGCCCGGCGCACGCGCGCCACGGTCTGGTGGGTGGCCTTGAGTTCCTGTTCCTGCGACACGTCGAACAGGTGGTAACGGTTGCGCCCGCGCTGCTTGGCCACATACATGGCCTGGTCGGCGTGGCGCACCAGGGTGTC  <  NC_002947/2575803‑2575659

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.