New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2747292 =	29 (0.920)	3 (0.100)	3/240	NT	10.0%	coding (520/1287 nt)	PP_2402	sensor histidine kinase
	?	NC_002947	2747314 =	26 (0.850)					coding (498/1287 nt)	PP_2402	sensor histidine kinase

ACTTCCAGGCGCACCTGAAGCTGGCCGACGGCGCGCCACTGACCATCGACGTGACGCCAGCACCGGTCCCGGTAGCCCGTTGGTTGCCCGTGGTGCTGCTGATTCAGCTGGCTGTGCTGTTGCTGTGTACCTGG‑CTGGCGGTACGCCTGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2747444‑2747292 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccaGGTACACAGCAACAGCACAGCCAGCTGAATCAGCAGCACCACGGGCAACCAACGGGCTACCGGGACCGGTGCTGGCGTCACGTCGATGGTCAGTGGCGCGCCGTCGGCCAGCTTCAGGTGCGCCTGGAAGTGCGCATTGGGCCCCGG  >  NC_002947/2747314‑2747460                                                                                                                                                                                                                                                                                                               ACTTCCAGGCGCACCTGAAGCTGGCCGACGGCGCGCCACTGACCATCGACGTGACGCCAGCACCGGTCCCGGTAGCCCGTTGGTTGCCCGTGGTGCTGCTGATTCAGCTGGCTGTGCTGTTGCTGTGTACCTGG‑CTGGCGGTACGCCTGG                                                                                                                                                        >  1:655879/1‑150                       GGCCGACGGCGCGCCACTGACCATCGACGTGACGCCAGCACCGGTCCCGGTAGCCCGTTGGTTGCCCGTGGTGCTGCTGATTCAGCTGGCTGTGCTGTTGCTGTGTACCTGGCCAGGCGTACCGCC‑AGCCAGGTACACAGCAACAGCACA                                                                                                                                  <  2:574169/150‑1                                                                                                                              TGTACCTGG‑CTGGCGGTACGCCTGGCCAGGTACACAGCAACAGCACAGCCAGCTGAATCAGCAGCACCACGGGCAACCAACGGGCTACCGGGACCGGTGCTGGCGTCACGT                                                                  >  1:415535/1‑111                                                                                                                              TGTACCTGG‑CTGGCGGTACGCCTGGCCAGGTACACAGCAACAGCACAGCCAGCTGAATCAGCAGCACCACGGGCAACCAACGGGCTACCGGGACCGGTGCTGGCGTCACGT                                                                  <  2:415535/111‑1                                                                                                                                                        CCAGGTACACAGCAACAGCACAGCCAGCTGAATCAGCAGCACCACGGGCAACCAACGGGCTACCGGGACCGGTGCTGGCGTCACGTCGATGGTCAGTGGCGCGCCGTCGGCCAGCTTCAGGTGCGCCTGGAAGTGCGCATTGGGCCCCGG  >  1:468688/1‑150                                                                                                                                                        CCAGGTACACAGCAACAGCACAGCCAGCTGAATCAGCAGCACCACGGGCAACCAACGGGCTACCGGGACCGGTGCTGGCGTCACGTCGATGGTCAGTGGCGCGCCGTCGGCCAGCTTCAGGTGCGCCTGGAAGTGCGCATTGGGCCCCGG  <  1:574169/150‑1                                                                                                                                                        CCAGGTACACAGCAACAGCACAGCCAGCTGAATCAGCAGCACCACGGGCAACCAACGGGCTACCGGGACCGGTGCTGGCGTCACGTCGATGGTCAGTGGCGCGCCGTCGGCCAGCTTCAGGTGCGCCTGGAAGTGCGCATTGGGCCCCGG  <  1:68216/150‑1                                                                                                                                                                                                                                                                                                               ACTTCCAGGCGCACCTGAAGCTGGCCGACGGCGCGCCACTGACCATCGACGTGACGCCAGCACCGGTCCCGGTAGCCCGTTGGTTGCCCGTGGTGCTGCTGATTCAGCTGGCTGTGCTGTTGCTGTGTACCTGG‑CTGGCGGTACGCCTGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2747444‑2747292 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccaGGTACACAGCAACAGCACAGCCAGCTGAATCAGCAGCACCACGGGCAACCAACGGGCTACCGGGACCGGTGCTGGCGTCACGTCGATGGTCAGTGGCGCGCCGTCGGCCAGCTTCAGGTGCGCCTGGAAGTGCGCATTGGGCCCCGG  >  NC_002947/2747314‑2747460

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.