New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3219398 | 38 (1.200) | 3 (0.100) | 3/230 | NT | 7.6% | intergenic (‑98/+80) | nfxB/PP_2821 | HTH‑type transcriptional regulator NfxB/hypothetical protein |
? | NC_002947 | = 3219419 | 38 (1.290) | intergenic (‑119/+59) | nfxB/PP_2821 | HTH‑type transcriptional regulator NfxB/hypothetical protein |
ACGACGATCGCGTCGGCCAGCGCTTTGAGCAGGCGCTCATCGGTAGGGAGGTGCATCAGAAGATTCCACACTGCATATCGTGCGGGCATTGTGAATGAAAACGGCTCATAGGGCACCCATTTGAGCAAATAATGGCTCAATCAAGGCTCGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3219245‑3219398 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctcgcaggCAAGCCCCTGCAGGGCTGCGACCTGCGAGCCTTGATTGAGCCATTATTTGCTCAAATGGGTGCCCTATGAGCCGTTTTCATTCACAATGCCCGCACGATATGCAGTGTGGAATCTTCTGATGCACCTCCCTACCGATGAGCGCCTGCT < NC_002947/3219419‑3219272 ACGACGATCGCGTCGGCCAGCGCTTTGAGCAGGCGCTCATCGGTAGGGAGGTGCATCAGAAGATTCCACACTGCATATCGTGCGGGCATTGTGAATGAAAACGGCTCATAGGGCACCCATTTGAGCAAATAATGGCTCAATCAAGGCTCG > 2:319671/1‑150 gCGGTAGGGAGGTGCATCAGAAGATTCCACACTGCATATCGTGCGGGCATTGTGAATGAAAACGGCTCATAGGGCACCCATTTGACCAAATTATGGCTCAATCAAGGCTCGCAGGCAAGCCCCTGCAGGGCTGCGACCTGCGAGCCTTGA < 1:635277/149‑1 CGGGCATTGTGAATGAAAACGGCTCATAGGGCACCCATTTGAGCAAATAATGGCTCAATCAAGGCTCGCAGGCAAGCCCCTGCAGGGCTGCGACCTGCGAGCCTTGATTGAG > 1:249836/1‑112 CGGGCATTGTGAATGAAAACGGCTCATAGGGCACCCATTTGAGCAAATAATGGCTCAATCAAGGCTCGCAGGCAAGCCCCTGCAGGGCTGCGACCTGCGAGCCTTCATTGAG < 2:249836/112‑1 TCGCAGGGAAGCGCCTGCAGGGCTGCGAGGTGCTAGCCTTGATTGAGCCATTATTTGCTCAAATGGGTTCCCTATGAGCCGTTTTCATTCACATTGCCCGCACGATATGCAGTGTGGACTCTTCTTATGCACCTCCCTACCGATGAGCGC < 2:89480/150‑1 GGCAAGCCCCTGCAGGGCTGCGACCTGCGAGCCTTGATTGAGCCATTATTTGCTCAAATGGGTGCCCTATGAGCCGTTTTCATTCACAATGCCCGCACGATATGCAGTGTGGAATCTTCTGATGCACCTCCCTACCGATGAGCGCCTGCT < 2:659025/150‑1 ACGACGATCGCGTCGGCCAGCGCTTTGAGCAGGCGCTCATCGGTAGGGAGGTGCATCAGAAGATTCCACACTGCATATCGTGCGGGCATTGTGAATGAAAACGGCTCATAGGGCACCCATTTGAGCAAATAATGGCTCAATCAAGGCTCGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3219245‑3219398 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctcgcaggCAAGCCCCTGCAGGGCTGCGACCTGCGAGCCTTGATTGAGCCATTATTTGCTCAAATGGGTGCCCTATGAGCCGTTTTCATTCACAATGCCCGCACGATATGCAGTGTGGAATCTTCTGATGCACCTCCCTACCGATGAGCGCCTGCT < NC_002947/3219419‑3219272 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |