| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3632310 = | 27 (0.850) | 4 (0.130) | 4/238 | NT | 13.1% | coding (1161/1368 nt) | PP_5590 | hypothetical protein |
| ? | NC_002947 | 3632380 = | 27 (0.890) | coding (1231/1368 nt) | PP_5590 | hypothetical protein | |||||
GCGGCACGATGCGGTACTGTTCGTTCTTGCCTGCGAACAGGTCACCGGCGAACCAGGCACCGGAGAGCAGGTCGTAGAAGCCGTTGGTCAAGGTCACCACGCCCGGCAGGTCAGGCAGCACCACCGGCGAGGTCCAGACCACCTTGGCCAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3632461‑3632310‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaacGGCTTCTACGACCTGCTCTCCGGTGCCTGGTTCGCCGGTGACCTGTTCGCAGGCAAGAACGAACAGTACCGCATCGTGCCGCCCTACAAGGACTCGGTGTTCACCGCCGACGCCATGGCCGGCGAGGGCGTGCGCTGAGCAGGCG > NC_002947/3632380‑3632524 GCGGCACGATGCGGTACTGTTCGTTCTTGCCTGCGAACAGGTCACCGGCGAACCAGGCACCGGAGAGCAGGTCGTAGAAGCCGTTGGTCAAGGTCACCACGCCCGGCAGGTCAGGCAGCACCACCGGCGAGGTCCAGACCACCTTGGC > 1:64943/1‑148GCGGCACGATGCGGTACTGTTCGTTCTTGCCTGCGAACAGGTCACCGGCGAACCAGGCACCGGAGAGCAGGTCGTAGAAGCCGTTGGTCAAGGTCACCACGCCCGGCAGGTCAGGCAGCACCACCGGCGAGGTCCAGACCACCTTGGC < 2:64943/148‑1 CGTTGGTCAAGGTCACCACGCCCGGCAGGTCAGGCAGCACCACCGGCGAGGTCCAGACCACCTTGGCCAACGGCTTCTACGACCTGCTCTCCGGTGCCTGGTTCGCCGGTGACCTGTTCGCAGGCAAGAACGAACAGTACCGCATCGTGC > 1:24510/1‑150 GTTGGTCAAGGTCACCACGCCCGGCAGGTCAGGCAGCACCACCGGCGAGGTCCAGACCACCTTGGCCAACGGCTTCTACGACCTGCTCTCCGGTGCCTGGTTCGCC > 1:592049/1‑106 GTTGGTCAAGGTCACCACGCCCGGCAGGTCAGGCAGCACCACCGGCGAGGTCCAGACCACCTTGGCCAACGGCTTCTACGACCTGCTCTCCGGTGCCTGGTTCGCC < 2:592049/106‑1 CCCGGCAGGTCAGGCAGCACCACCGGCGAGGTCCAGACCACCTTGGCCAACGGCTTCTACGACCTGCTCTCCGGTGCCTGGTTCGCCGGTGACCTGTTCGCAGGCAAGAACGAACAGTACCGCATCGTGCCGCCCTACAAGGACTCGGTG < 2:24510/150‑1 CCAACGGCTTCTACGACCTGCTCTCCGGTGCCTGGTTCGCCGGTGACCTGTTCGCAGGCAAGAACGAACAGTACCGCATCGTGCCGCCCTACAAGGACTCGGTGTTCACCGCCGACGCCATGGCCGGCTAGGGCGTGCGCTGAGCAGGCG > 2:440557/1‑150 GCGGCACGATGCGGTACTGTTCGTTCTTGCCTGCGAACAGGTCACCGGCGAACCAGGCACCGGAGAGCAGGTCGTAGAAGCCGTTGGTCAAGGTCACCACGCCCGGCAGGTCAGGCAGCACCACCGGCGAGGTCCAGACCACCTTGGCCAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3632461‑3632310‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaacGGCTTCTACGACCTGCTCTCCGGTGCCTGGTTCGCCGGTGACCTGTTCGCAGGCAAGAACGAACAGTACCGCATCGTGCCGCCCTACAAGGACTCGGTGTTCACCGCCGACGCCATGGCCGGCGAGGGCGTGCGCTGAGCAGGCG > NC_002947/3632380‑3632524 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |