New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3930704 = | 26 (0.820) | 3 (0.100) | 3/240 | NT | 12.7% | coding (448/1293 nt) | PP_5603 | FAD dependent oxidoreductase |
? | NC_002947 | 3930745 = | 16 (0.520) | coding (407/1293 nt) | PP_5603 | FAD dependent oxidoreductase |
GTGCTGACCGCTGATTTCCTGGTCGAGGCCCGAGGCCGTCAGGCACCCCTGGCCGCAGACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3930764‑3930704 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaccAGGAAATCAGCGGTCAGCACCTGCCCATCGTCCAGGCGCACATGATGACCGCCCCCCTGCACGACCTCACGCACCCGCCCCTCGACCACACTCACGCCTGCGCGCTGAAGGTCTTCGCGCAGCGCTTGGTCAAAACGTTGCCGGTCG > NC_002947/3930745‑3930891 GTGCTGACCGCTGATTTCCTGGTCGAGGCCCGAGGCCGTCAGGCACCCCTGGCCGCAGACCAGGAAATCAGCGGTCAGCACCT < 1:115686/83‑1 GTGCTGACCGCTGATTTCCTGGTCGAGGCCCGAGGCCGTCAGGCACCCCTGGCCGCAGACCAGGAAATCAGCGGTCAGCACCT > 2:115686/1‑83 TTCCTGGTCGAGGCCCGAGGCCGTCAGGCACCCCTGGCCGCAGACCAGGAAATCAGCGGTCAGCACCTGCCCATCGTCCAGGCGCACATGATGACCGCCCCCCTGCACGACCTCACGCACCCGCCCCTCGACCACACTCACGCCTGCGCG > 1:364967/1‑150 ACCAGGAAATCAGCGGTCAGCACCTGCCCATCGTCCAGGCGCACATGATGACCGCCCCCCTGCACGACCTCACGCACCCGCCCCTCGACCACACTCACGCCTGCGCGCTGAAGGTCTTCGCGCAGCGCTTGGTCAAAACGTTGCCGGTCG > 2:666590/1‑150 GTGCTGACCGCTGATTTCCTGGTCGAGGCCCGAGGCCGTCAGGCACCCCTGGCCGCAGACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3930764‑3930704 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaccAGGAAATCAGCGGTCAGCACCTGCCCATCGTCCAGGCGCACATGATGACCGCCCCCCTGCACGACCTCACGCACCCGCCCCTCGACCACACTCACGCCTGCGCGCTGAAGGTCTTCGCGCAGCGCTTGGTCAAAACGTTGCCGGTCG > NC_002947/3930745‑3930891 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |