New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4016697 =	23 (0.730)	4 (0.140)	4/226	NT	13.6%	coding (555/1410 nt)	PP_3544	GntR family transcriptional regulator
	?	NC_002947	4016768 =	30 (1.040)					coding (626/1410 nt)	PP_3544	GntR family transcriptional regulator

GGTCTGCGCCAGCACCCCCAGGTCCATGCCCTCGCGCGGGTGCACGGGGATTTCCACAGCCTTGAGCTTGAGCCGCTCCAGCACCTGCAGGCAGGCATAGAAGGCCGGGGCCTCGATGGCGACCAGATCGCCCGGCTGGGTCACTGCCTGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4016850‑4016697 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcctgcaggTGCTGGAGCGGCTCAAGCTCAAGGCTGTGGAAATCCCCGTGCACCCGCGCGAGGGCATGGACCTGGGGGTGCTGGCGCAGACCCTGGAAATGCACCCGGTAAAGGCCGTGTGGTGCATGACCAATTTCCAGAACCCGGTG  >  NC_002947/4016768‑4016907                                                                                                                                                                                                                                                                                                        GGTCTGCGCCAGCACCCCCAGGTCCATGCCCTCGCGCGGGTGCACGGGGATTTCCACAGCCTTGAGCTTGAGCCGCTCCAGCACCTGCAGGCAGGCATAGAAGGCCGGGGCCTCGATGGCGACCAGATCGCCCGGCTGGGTCACTGCCTG                                                                                                                                                  >  2:772020/1‑150                                                                               CAGCACCTGCAGGCAGGCATAGAAGGCCGGGGCCTCGATGGCGACCAGATCGCCCGGCTGGGTCACTGCCTGCAGGTGCTGGAGCGGCTCAAGCTCAAGGCTGTGGAAATCCCCGTGCACCCGCGCGAGGGCATGGACCTGGGG                                                                          <  1:67273/144‑1                                                                               CAGCACCTGCAGGCAGGCATAGAAGGCCGGGGCCTCGATGGCGACCAGATCGCCCGGCTGGGTCACTGCCTGCAGGTGCTGGAGCGGCTCAAGCTCAAGGCTGTGGAAATCCCCGTGCACCCGCGCGAGGGCATGGACCTGGGG                                                                          >  2:67273/1‑144                                                                                   ACCTGCAGGCAGGCATAGAAGGCCGGGGCCTCGATGGCGACCAGATCGCCCGGCTGGGTCACTGCCTGCAGGTGCTGGAGCGGCTCAAGCTCAAGGCTGTGGAAACCCCCGTGCACCCGCGCGAGGGCATGGACCTGGGGGTGCTGGCGC                                                                >  1:730050/1‑150                                                                                                                         GACCAGATCGCCCGGCTGGGTCACTGCCTGCAGGTGCTGGAGCGGCTCAAGCTCAAGGCTGTGGAAACCCCCGTGCACCCGCGCGAGGGCATGGACCTGGGGGTGCTGGCGCAGACCCTGGAAATGCACCCGGTAAAGGCCGTGTGGTGC                          <  2:730050/150‑1                                                                                                                                                 TGCCTGCAGGTGCTGGAGCGGCTCAAGCTCAAGGCTGTGGAAATCCCCGTGCACCCGCGCGAGGGCATGGACCTGGGGGTGCTGGCGCAGACCCTGGAAATGCACCCGGTAAAGGCCGTGTGGTGCATGACCAATTTCCAGAACCCGGTG  <  1:228672/150‑1                                                                                                                                                         GGTGCTGGAGCGGCTCAAGCTCAAGGCTGTGGAAATCCCCG                                                                                                       <  1:97431/41‑1                                                                                                                                                         GGTGCTGGAGCGGCTCAAGCTCAAGGCTGTGGAAATCCCCG                                                                                                       >  2:97431/1‑41                                                                                                                                                                                                                                                                                                        GGTCTGCGCCAGCACCCCCAGGTCCATGCCCTCGCGCGGGTGCACGGGGATTTCCACAGCCTTGAGCTTGAGCCGCTCCAGCACCTGCAGGCAGGCATAGAAGGCCGGGGCCTCGATGGCGACCAGATCGCCCGGCTGGGTCACTGCCTGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4016850‑4016697 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcctgcaggTGCTGGAGCGGCTCAAGCTCAAGGCTGTGGAAATCCCCGTGCACCCGCGCGAGGGCATGGACCTGGGGGTGCTGGCGCAGACCCTGGAAATGCACCCGGTAAAGGCCGTGTGGTGCATGACCAATTTCCAGAACCCGGTG  >  NC_002947/4016768‑4016907

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.