| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4280116 | 44 (1.390) | 4 (0.130) | 4/240 | NT | 9.2% | coding (1272/1434 nt) | PP_3750 | GntR family transcriptional regulator |
| ? | NC_002947 | = 4280140 | 36 (1.170) | coding (1296/1434 nt) | PP_3750 | GntR family transcriptional regulator | |||||
TCTACAGCGCACGCCGCGAGCGCATCCTGGCGCGCCTGGGCGGCGATCTGGCACCGTGGTTCAGCGCCATCCCCGCCAGCGCAGGCTTCCACCTCAGTGCCTTGGCCACCCCCGGGGTGGATGTGGAGCTGTTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4279980‑4280116‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccTACCTCTACCTTACGCGCGAGGTTGGCCAACAGCTCCACATCCACCCCGGGGGTGGCCAAGGCACTGAGGTGGAAGCCTGCGCTGGCGGGGATGGCGCTGAACCACGGTGCCAGATCGCCGCCCAGGCGCGCCAGGATGCGCTCGCG < NC_002947/4280140‑4279994 TCTACAGCGCACGCCGCGAGCGCATCCTGGCGCGCCTGGGCGGCGATCTGGCACCGTGGTTCAGCGCCATCCCCGCCAGCGCAGGCTTCCACCTCAGTGCCTTGGCCACCCCCGGGGTGGATGTGGAGCTGTTGGCCT < 1:114986/138‑1TCTACAGCGCACGCCGCGAGCGCATCCTGGCGCGCCTGGGCGGCGATCTGGCACCGTGGTTCAGCGCCATCCCCGCCAGCGCAGGCTTCCACCTCAGTGCCTTGGCCACCCCCGGGGTGGATGTGGAGCTGTTGGCCT > 2:114986/1‑138 TTCCACCTCAGTGCCTTGGCCACCCCCGGGGTGGATGTGGAGCTGTTGGCCTACCTCTACCTTACGCGCGAGGTTGGCCAACAGCTCCACATCCAC < 2:19219/96‑1 TTCCACCTCAGTGCCTTGGCCACCCCCGGGGTGGATGTGGAGCTGTTGGCCTACCTCTACATTACGCGCGAGGTTGGCCAACAGCTCCACATCCAC > 1:19219/1‑96 CCCCGGGGTGGATGTGGAGCTGTTGGTCTACCTCTACCTTACGCGCGAGGTTGGCC < 1:202631/56‑1 CCCCGGGGTGGATGTGGAGCTGTTGGTCTACCTCTACCTTACGCGCGAGGTTGGCC > 2:202631/1‑56 GCCTACCTCTACCTTACGCGCGAGGTTGGCCAACAGCTCCACATCCACCCCGGGGGTGGCCAAGGCACTGAGGTGGAAGCCTGCGCTGGCGGGGATGGCGCTGAACCACGGTGCCAGATCGCCGCCCAGGCGCGCCAGGATGCGCTCGCG > 1:694647/1‑150 TCTACAGCGCACGCCGCGAGCGCATCCTGGCGCGCCTGGGCGGCGATCTGGCACCGTGGTTCAGCGCCATCCCCGCCAGCGCAGGCTTCCACCTCAGTGCCTTGGCCACCCCCGGGGTGGATGTGGAGCTGTTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4279980‑4280116‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccTACCTCTACCTTACGCGCGAGGTTGGCCAACAGCTCCACATCCACCCCGGGGGTGGCCAAGGCACTGAGGTGGAAGCCTGCGCTGGCGGGGATGGCGCTGAACCACGGTGCCAGATCGCCGCCCAGGCGCGCCAGGATGCGCTCGCG < NC_002947/4280140‑4279994 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |