New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4668405 =	28 (0.880)	3 (0.100)	3/232	NT	9.5%	coding (231/1533 nt)	nuoM	NADH‑quinone oxidoreductase subunit M
	?	NC_002947	4668448 =	31 (1.050)					coding (274/1533 nt)	nuoM	NADH‑quinone oxidoreductase subunit M

ACCACGCCGCCGAGGATCCACATCAGGTTGAGGTGGAAGAAGCCGACGTGGCGCTGGATCTCTTTCCAGGAACACAGTACCGACAGCACACCGAGCAGGCCGGTGAGCAGGATCATCAGCAGCGACAGGCCGTCCAGGGCCAGGTGGATGCTGATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4668560‑4668405 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgctgatgATCCTGCTCACCGGCCTGCTCGGTGTGCTGTCGGTACTGTGTTCCTGGAAAGAGATCCAGCGCCACGTCGGCTTCTTCCACCTCAACCTGATGTGGATCCTCGGCGGCG  >  NC_002947/4668448‑4668556                                                                                                                                                                                                                                                                           ACCACGCCGCCGAGGATCCACATCAGGTTGAGGTGGAAGAAGCCGACGTGGCGCTGGATCTCTTTCCAGGAACACAGTACCGACAGCACACCGAGCAGGCCGGTGAGCAGGATCATCAGCAGCGACAGGCCGTCCAGGGCCAGGTGGATG                                                                                                                     >  2:234028/1‑150                                                                                                                 TCATCAGCAGCGACAGGCCGTCCAGGGCCAGGTGGATGCTGATGATCCTGCTCACCGGCCTGCTCGGTGTGCTGTCGGTACTGTGTTCCTGGAAAGAGATCCAGCGCCACGTCGGCTTCTTCCACCTCAACCTGATGT                 >  1:131273/1‑138                                                                                                                 TCATCAGCAGCGACAGGCCGTCCAGGGCCAGGTGGATGCTGATGATCCTGCTCACCGGCCTGCTCGGTGTGCTGTCGGTACTGTGTTCCTGGAAAGAGATCCAGCGCCACGTCGGCTTCTTCCACCTCAACCTGATGT                 <  2:131273/138‑1                                                                                                                    TCAGCAGCGACAGGCCGTCCAGGGCCAGGTGGATGCTGATGATCCTGCTCACCGGCCTGCTCGGTGTGCTGTCGGTACTGTGTTCCTGGAAAGAGATCCAGCGCCACGTCGGCTTCTTCCACCTCAACCTGATGTGGATCCTCGGCGGCG  >  1:380645/1‑150                                                                                                                                                                                                                                                                           ACCACGCCGCCGAGGATCCACATCAGGTTGAGGTGGAAGAAGCCGACGTGGCGCTGGATCTCTTTCCAGGAACACAGTACCGACAGCACACCGAGCAGGCCGGTGAGCAGGATCATCAGCAGCGACAGGCCGTCCAGGGCCAGGTGGATGCTGATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4668560‑4668405 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgctgatgATCCTGCTCACCGGCCTGCTCGGTGTGCTGTCGGTACTGTGTTCCTGGAAAGAGATCCAGCGCCACGTCGGCTTCTTCCACCTCAACCTGATGTGGATCCTCGGCGGCG  >  NC_002947/4668448‑4668556

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.