New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4668405 =	28 (0.880)	3 (0.100)	3/232	NT	9.5%	coding (231/1533 nt)	nuoM	NADH‑quinone oxidoreductase subunit M
	?	NC_002947	4668448 =	31 (1.050)					coding (274/1533 nt)	nuoM	NADH‑quinone oxidoreductase subunit M

CCTGTGGCTGTGGGGTACCGGCGACTACACCCTTGCTCCCGCCCCGGGCGCCGAACCGGCCTGGGCTCTCGAATACAAAGTCGAGTGGATCAAGCGTTTCGGCATCAGCATCCACCTGGCCCTGGACGGCCTGTCGCTGCTGATGATCCTGCTCACCGGCCTGCTCGGTGTGCTGTCGGTACTGTGTTCCTGGAAAGAGATCCAGCGCCACGTCGGCTTCTTCCACCTCAACCTGATGTGGATCCTCGGCGGCGTGGTCGGTGTGTTCCTGGCCCTGGACCTGTTCCTGTTCTTC  >  NC_002947/4668303‑4668597                                                                                                                                                  |                                                                                                                                                      ccTGTGGCTGTGGGGTACCGGCGACTACACCCTTGCTCCCGCCCCGGGCGCCGAACCGGCCTGGGCTCTCGAATACAAAGTCGAGTGGATCAAGCGTTTCGGCATCAGCATCCACCTGGCCCTGGACGGCCTGTCGCTGCTGATGATCCt                                                                                                                                                   <  2:526631/150‑1 (MQ=255)         acatcaggttgaggtggaagaagccgacgtggcgctggatctctttccaggaacacagtaccgacagcacaccgagcaggccggtgagcaggatCATCAGCATCCACCTGGCCCTGGACGGCCTGTCGCTGCtgatga                                                                                                                                                       >  1:131273‑M1/95‑138 (MQ=255)         acatcaggttgaggtggaagaagccgacgtggcgctggatctctttccaggaacacagtaccgacagcacaccgagcaggccggtgagcaggatCATCAGCATCCACCTGGCCCTGGACGGCCTGTCGCTGCtgatga                                                                                                                                                       <  2:131273‑M1/44‑1 (MQ=255)                    ggCGACTACACCCTTGCTCCCGCCCCGGGCGCCGACACACCCTGGGCTCTCGAATACAAAGTCGAGTGGATCAAGCGTTTCGGCATCAGCATCCACCTGGCCCTGGACGGCCTGTCGCTGCTGATGATCCTGCTCACCGGCCTGCTCGgt                                                                                                                                <  1:816914/150‑1 (MQ=255)                             acCCTTGCTCCCGCCCCGGGCGCCGAACCGGCCTGGGCTCTCGAATACAAAGTCGAGTGGATCAAGCGTTTCGGCATCAGCATCCACCTGGCCCTGGACGGCCTGTCGCTGCTGATGATCCTGCTCACCGGCCTGCTCGGTGTGCTGTCg                                                                                                                       <  2:516523/150‑1 (MQ=255)                                     tCCCGCCCCGGGCGCCGAACCGGCCTGGGCTCTCGAATACAAAGTCGAGTGGATCAAGCGTTTCGGCATCAGCATCCACCTGGCCCTGGACGGCCTGTCGCTGCTGATGATCCTGCTCACCGGCCTGCTCGGTGTGCTGTCGGTACtgtg                                                                                                               >  1:300722/1‑150 (MQ=255)                                        cGCCCCGGGCGCCGAACCGGCCTGGGCTCTCGAATACAAAGTCGAGTGGATCAAGCGTTTCGGCATCAGCATCCACCTGGCCCTGGACGGCCTGTCGCTGCTGATGATCCTGCTCACCGGCCTGCTCGGTGTGCTGTCGGTACTGTGTTc                                                                                                            >  1:767679/1‑150 (MQ=255)                                             cGGGCGCCGAACCGGCCTGGGCTCTCGAATACAAAGTCGAGTGGATCAAGCGTTTCGGCATCAGCATCCACCTGGCCCTGGACGGCCTGTCGCTGCTGATGATCCTGCTCACCGGCCTGCTCGGTGTGCTGTCGGTACTGTGTTCCTGGa                                                                                                       >  1:557667/1‑150 (MQ=255)                                               ggCGCCGAACCGGCCTGGGCTCTCGAATACAAAGTCGAGTGGATCAAGCGTTTCGGCATCAGCATCCACCTGGCCCTGGACGGCCTGTCGCTGCTGATGATCCTGCTCACCGGCCTGCTCGGTGTGCTGTCGGTACTGTGTTCCTGGaaa                                                                                                     <  2:557667/150‑1 (MQ=255)                                                gcgcCGAACCGGCCTGGGCTCTCGAATACAAAGTCGAGTGGATCAAGCGTTTCGGCATCAGCATCCACCTGGCCCTGCTCGGCCTGTCGCTGCTGATGATCCTGCTCACCGGCCTGCTCGGTGTGCTGTCGGTACTGTGTTCCTGGAAag                                                                                                    >  1:57197/1‑150 (MQ=255)                                                    cGAACCGGCCTGGGCTCTCGAATACAAAGTCGAGTGGATCAAGCGTTTCGGCATCAGCATCCACCTGGCCCTGGACGGCCTGTCGCTGCTGATGATCCTGCTCACCGGCCTGCTCGGTGTGCTGTCGGTACTGTGTTCCTGGAAAGAGAt                                                                                                <  1:208552/150‑1 (MQ=255)                                                    cGAACCGGCCTGGGCTCTCGAATACAAAGTCGAGTGGATCAAGCGTTTCGGCATCAGCATCCACCTGGCCCTGGACGGCCTGTCGCTGCTGATGATCCTGCTCACCGGCCTGCTCGGTGTGCTGTCGGTACTGTGTTCCTGGAAAGAGAt                                                                                                <  2:45742/150‑1 (MQ=255)                                                                 gCTCTCGAATACAAAGTCGAGTGGATCAAGCGTTTCGGCATCAGCATCCACCTGGCCCTGGACGGCCTGTCGCTGCTGATGATCCTGCTCACCGGCCTGCTCGGTGTGCTGTCGGTACTGTGTTCCTGGAAAGAGATCCAGCGCCACGTc                                                                                   <  2:767679/150‑1 (MQ=255)                                                                    ctcGAATACAAAGTCGAGTGGATCAAGCGTTTCGGCATCAGCATCCACCTGGCCCTGGACGGCCTGTCGCTGCTGATGATCCTGCTCACCGGCCTGCTCGGTGTGCTGTCGGTACTGTGTTCCTGGAAAGAGATCCAGCGCCACGTcaac                                                                                <  2:850402/150‑4 (MQ=255)                                                                     tcGAATACAAAGTCGAGTGGATCAAGCGTTTCGGCATCAGCATCCACCTGGCCCTGGACGGCCTGTCGCTGCTGATGATCCTGCTCACCGGCCTGCTCGGTGTGCTGTCGGTACtgt                                                                                                                >  2:843345/1‑117 (MQ=255)                                                                     tcGAATACAAAGTCGAGTGGATCAAGCGTTTCGGCATCAGCATCCACCTGGCCCTGGACGGCCTGTCGCTGCTGATGATCCTGCTCACCGGCCTGCTCGGTGTGCTGTCGGTACtgt                                                                                                                <  1:843345/117‑1 (MQ=255)                                                                       gAATACAAAGTCGAGTGGATCAAGCGTTTCGGCATCAGCATCCACCTGGCCCTGGACGGCCTGTCGCTGCTGATGATCCTGCTCACCGGCCTGCTCGGTGTGCTGTCGGTACTGTGTTCCTGGAAAGAGATCCAGCGCCACGTCGGcttc                                                                             >  1:486752/1‑150 (MQ=255)                                                                          tACAAAGTCGAGTGGATCAAGCGTTTCGGCATCAGCATCCACCTGGCCCTGGACGGCCTGTCGCTGCTGATGATCCTGCTCACCGGCCTGCTCGGTGTGCTGTCGGTACTGTGTTCCTGGAAAGAGATCCAGCGCCACGTCGGCttcttc                                                                          <  2:300722/150‑1 (MQ=255)                                                                             aaaGTCGAGTGGATCAAGCGTTTCGGCATCAGCATCCACCTGGCCCTGGACGGCCTGTCGCTGCTGATGATCCTGCTCACCGGCCTGCTCGGTGTGCTGTCGGTACTGTGTTCCTGGAAAGAGATCCAGCGCCACGTCGGCTTCTTCCAc                                                                       >  1:234028/1‑150 (MQ=255)                                                                                     gTGGATCAAGCGTTTCGGCATCAGCATCCACCTGGCCCTGGACGGCCTGTCGCTGCTGATGATCCTGCTCACCGGCCTGCTCGGTGTGCTGTCGGTACTGTGTTCCTGGAAAGAGATCCAGCGCCACGTCGGCTTCTTCCACCTCAACCt                                                               >  1:769580/1‑150 (MQ=255)                                                                                          tCAAGCGTTTCGGCATCAGCATCCACCTGGCCCTGGACGGCCTGTCGCTGCTGATGATCCTGCTCACCGGCCTGCTCGGTGTGCTGTCGGTACTGTGTTCCTGGAAAGAGATCCAGCGCCACGTCGGCTTCTTCCACCTCAACCTGAtgt                                                          <  2:769580/150‑1 (MQ=255)                                                                                             aGCGTTTCGGCATCAGCATCCACCTGGCCCTGGACGGCCTGTCGCTGCTGATGATCCTGCTCACCGGCCTGCTCGGTGTGCTGTCGGTACTGTGTTCCTGGAAAGAGATCCAGCGCCACGTCGGCTTCTTCCACCTCAACCTGATGTGGa                                                       >  1:288475/1‑150 (MQ=255)                                                                                                gTTTCGGCATCAGCATCCACCTGGCCCTGGACGGCCTGTCGCTGCTGATGATCCTGCTCACCGGCCTGCTCGGTGTGCTGTCGGTACTGTGTTCCTGGAAAGAGATCCAGCGCCACGTCGGCTTCTTCCACCTCAACCTGATGTGGATcc                                                    >  1:624597/1‑150 (MQ=255)                                                                                                      tcatcagcagcgacaggccgtccagggccaggtggatgctgatgATCCTGCTCACCGGCCTGCTCGGTGTGCTGTCGGTACTGTGTTCCTGGAAAGAGATCCAGCGCCACGTCGGCTTCTTCCACCTCAACCTGAtgt                                                          >  1:131273‑M2/45‑138 (MQ=255)                                                                                                      tcatcagcagcgacaggccgtccagggccaggtggatgctgatgATCCTGCTCACCGGCCTGCTCGGTGTGCTGTCGGTACTGTGTTCCTGGAAAGAGATCCAGCGCCACGTCGGCTTCTTCCACCTCAACCTGAtgt                                                          <  2:131273‑M2/94‑1 (MQ=255)                                                                                                         tcagcagcgacaggccgtccagggccaggtggatgctgatgATCCTGCTCACCGGCCTGCTCGGTGTGCTGTCGGTACTGTGTTCCTGGAAAGAGATCCAGCGCCACGTCGGCTTCTTCCACCTCAACCTGATGTGGATCCTCGgcggcg                                           >  1:380645‑M2/42‑150 (MQ=255)                                                                                                             CATCCACCTGGCCCTGGACGGCCTGTCGCTGCTGATGATCCTGCTCACCGGCCTGCTCGGTGTGCTGTCGGTACTGTGTTCCTGGAAAGAGATCCAGCGCCACGTCGGCTTCTTCCACCTCAACCTGATGTGGATCCTCGGCGGCGTGGt                                       >  2:234028‑M1/1‑150 (MQ=255)                                                                                                                  aCCTGGCCCTGGACGGCCTGTCGCTGCTGATGATCCTGCTCACCGGCCTGCTCGGTGTGCTGTCGGTACTGTGTTCCTGGAAAGAGATCCAGCGCCACGTCGGCTTCTTCCACCTCAACCTGATGTGGATCCTCGGCGGCGTGGTCGgtg                                  <  1:43036/150‑1 (MQ=255)                                                                                                                  aCCTGGCCCTGGACGGCCTGTCGCTGCTGATGATCCTGCTCACCGGCCTGCTCGGTGTGCTGTCGGTACTGTGTTCCTGGAAAGAGATCCAGCGCCACGTCGGATACTTCAACGGCGTCCTGATGTGGATCCTCGGCGGCGTGGGCGgtg                                  >  2:839517/1‑150 (MQ=255)                                                                                                                     tGGCCCTTGGCGGCCTGTCGCTGCTGATGATCCTGCTCACCGGCCTGCTCGGTGTGCTGTCGGTACTGTGTTCCTGGAAAGAGATCCAGCGCCACGTCGGCTTCTTCCACCTCAACCTGATGTGGATCCTCGGCGGCGTGGTCGgtgtgt                               <  1:314541/150‑1 (MQ=255)                                                                                                                     tGGCCCTGGACGGCCTGTCGCTGCTGATGATCCTGCTCACCGGCCTGCTCGGTGTGCTGTCGGTACTGTGTTCCTGGAAAGAGATCCAGCGCCACGTCGGCTTCTTCCACCTCAACCTGATGTGGATCCTCGGCGGCGTGGTCGgtgtgt                               >  1:43895/1‑150 (MQ=255)                                                                                                                     tGGCCCTGGACGGCCTGTCGCTGCTGATGATCCTGCTCACCGGCCTGCTCGGTGTGCTGTCGGTACTGTGTTCCTGGAAAGAGATCCAGCGCACCGTCCGCCTCGTCCACCTGAGCCTGGTGTGGGTCCTCGGCGGCGTGGTCGgtgtgt                               >  2:663111/1‑150 (MQ=255)                                                                                                                         ccTGGACGGCCTGTCGCTGCTGATGATCCTGCTCACCGGCCTGCTCGGTGTGCTGTCGGTACTGTGTTCCTGGAAAGAGATCCAGCGCCACGTCGGCTTCTTCCACCTCAACCTGATGTGGATCCCCGGCGGCTTGGTCGGTGTGTTCCt                           >  2:412314/1‑150 (MQ=255)                                                                                                                         ccTGGACGGCCTGTCGCTGCTGATGAGCCTGCTCACCGGCCTGCTCGGTGTGCTGTCGGTACTGTGTTCCTGGAAAGAGATCCAGCGCCACGTCGGCTTCTTCCACCTCAACCTGATGTGGATCCTCGGCGGCGTGGTCGGTGTGTTCCt                           >  2:11096/1‑150 (MQ=255)                                                                                                                         ccTGGACGGCCTGGCGCTGCTGAGGATCCTGCTCACCGGCCTGCTCGGTGTGCTGTCGGTACTGTGTTCCTGGAAAGAGATCCAGCGCCACGTCGGCTTCTTCCACCTCAACCTGATGTGGATCCTCGACGGCGTGGTCGGTGTGTTCCt                           >  2:440818/1‑150 (MQ=255)                                                                                                                                ggCCTGTCGCTGCTGATGATCCTGCTCACCGGCCTGCTCGGTGTGCTGTCGGTACTGTGTTCCTGGAAAGAGATCCAGCGCCACGTCGGCTTCTTCCACCTCAACCTGATGTGGATCCTCGGCGGCGTGGTCGgtgtgt                               >  1:568610/1‑139 (MQ=255)                                                                                                                                ggCCTGTCGCTGCTGATGATCCTGCTCACCGGCCTGCTCGGTGTGCTGTCGGTACTGTGTTCCTGGAAAGAGATCCAGCGCCACGTCGGCTTCTTCCACCTCAACCTGATGTGGATCCTCGGCGGCGTGGTCGgtgtgt                               <  2:568610/139‑1 (MQ=255)                                                                                                                                  ccTGTCGCTGCTGATGATCCTGCTCACCGGCCTGCTCGGTGTGCTGTCGGTACTGTGTTCCTGGAAAGAGATCCAGCGCCACGTCGGCTTCTTCCACCTCAACCTGATGTGGATCCTCGGCGGCGTGGTCGGTGTGTTCCTGGCCCTGGa                  <  2:43895/150‑1 (MQ=255)                                                                                                                                        gctgctGATGATCCTGCTCACCGGCCTGCTCGGTGTGCTGTCGGTACTGTGTTCCTGGAAAGAGATCCAGCGCCACGTCGGCTTCTTCCACCTCAACCTGATGTGGATCCTCGGCGGCGTGGTCGGTGTGTTCCTGGCCCTGGAcctgtt            >  1:728226/1‑150 (MQ=255)                                                                                                                                                  atCCTGCTCACCGGCCTGCTCGGTGTGCTGTCGGTACTGTGTTCCTGGAAAGAGATCCAGCGCCACGTCGGCTTCTTCCACCTCAACCTGATGTGGATCCTCGGCGGCGTGGTCAGTGTGTTCCTGGCCCTGGACCTGTTCCTGttcttc  <  2:288475/150‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                      CCTGTGGCTGTGGGGTACCGGCGACTACACCCTTGCTCCCGCCCCGGGCGCCGAACCGGCCTGGGCTCTCGAATACAAAGTCGAGTGGATCAAGCGTTTCGGCATCAGCATCCACCTGGCCCTGGACGGCCTGTCGCTGCTGATGATCCTGCTCACCGGCCTGCTCGGTGTGCTGTCGGTACTGTGTTCCTGGAAAGAGATCCAGCGCCACGTCGGCTTCTTCCACCTCAACCTGATGTGGATCCTCGGCGGCGTGGTCGGTGTGTTCCTGGCCCTGGACCTGTTCCTGTTCTTC  >  NC_002947/4668303‑4668597

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.