| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4785373 | 31 (0.980) | 3 (0.100) | 3/234 | NT | 8.7% | coding (1986/7887 nt) | pvdJ | non‑ribosomal peptide synthetase |
| ? | NC_002947 | = 4785401 | 34 (1.140) | coding (1958/7887 nt) | pvdJ | non‑ribosomal peptide synthetase | |||||
TGCTCACGCGACATCAGGTGCAGCAGACGGCCGGATGCCAGCGCGCCGAACAGCACGGTGTGCCCCAGGTCCGCCGCCACGGTCGAGACCATCGCCATGCTGGCGTCGGCTGGCAACTGCAGGCGCTGCAGGATGCCCTGCACGTAGTTGGCCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4785218‑4785373‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccagcCCAAGGGCGTGGTCGTTGCCCACGGCATGCTGGCCAACTACGTGCAGGGCATCCTGCAGCGCCTGCAGTTGCCAGCCGACGCCAGCATGGCGATGGTCTCGACCGTGGCGGCGGACCTGGGGCACACCGTGCTGTTCGGCGCGCTGGCA < NC_002947/4785401‑4785253 TGCTCACGCGACATCAGGTGCAGCAGACGGCCGGATGCCAGCGCGCCGAACAGCACGGTGTGCCCCAGGTCCGCCGCCACGGTCGAGACCATCGCCATGCTGGCGTCGGCTGGCAACTGCAGGCGCTGCAGGATGCCCTGCACGTAGTTG < 1:617734/150‑1 CTCACGCGACATCAGGTGCAGCAGACGGCCGGATGCCAGCGCGCCGAACAGCACGGTGTGCCCCAGGTCCGCCGCCACGGTCGAGACCATCGCCATGCTGGCGTCGGCTGGCAACTGCAGGCGCTGCAGGATGCCCTGCACGTAGTTGGC < 1:253536/150‑1 CACGCGACATCCGGTGCAGCAGCCGGCCGGATGCCAGCGCGCCGAACAGCACGGTGTGCCCCAGGTCCGCCGCCACGGTCGAGACCATCGCCATGCTGGCCTCGGCTGGTAACTGCAGGCGCTGCAGGATGCCCTGCACGTAGTTGGCCA < 1:240883/150‑1 ACGCGACATCAGGTGCAGCAGACGGCCGGATGCCAGCGCGCCGAACAGCACGGTGTGCCCCAGGTCCGCCGCCACGGTCGAGACCATCGCCATGCTGGCGTCGGCTGGCAACTGCAGGCGCTGCAGGATGCCCTGCACGTAGTTGGCCAG > 1:651180/1‑150 GCGCCGAACAGCACGGTGTGCCCCAGGTCCGCCGCCACGGTCGAGACCATCGCCATGCTGGCGTCGGCTGGCAACTGCAGGCGCTGCAGGATGCCCTGCACGTAGTTGGCCAGCCCAAGGGCGTGGTCGTTGCCCACGGCATGCTGGCCA < 2:420246/150‑1 AGACCATCGCCATGCTGGCGTCGGCTGGCAACTGCAGGCGCTGCAGGATGCCCTGCACGTAGTTGGCCAGCCCAAGGGCGTGGTCGTTGCCCACGGCATGCTGGCCAA > 1:206109/1‑108 AGACCATCGCCATGCTGGCGTCGGCTGGCAACTGCAGGCGCTGCAGGATGCCCTGCACGTAGTTGGCCAGCCCAAGGGCGTGGTCGTTGCCCACGGCATGCTGGCCAA < 2:206109/108‑1 GCCAGCCCAAGGGCGTGGTCGTTGCCCACGGCATGCTGGCCAACTACGTGCAGGGCATCCTGCAGCGCCTGCAGTTGCCAGCCGTCGCCAGCATGGCGATGGTCTCGACCGTGGCGGCGGACCTGGGGCACACCGTGCTGTTCGGCGCGC > 2:454962/1‑150 GCCAGCCCAAGGGCGTGGTCGTTGCCCACGGCATGCTGGCCAACTACGTGCAGGGCATCCTGCAGCGCCTGCAGTTGCCAGCCGACGCCAGCATGGCGATGGTCTCGACCGTGGCGGCGGACCTGGGGCACACCGTGCTGTTCGGCGCGC < 1:812849/150‑1 GCCCAAGGGCGTGGTCGTTGCCCACGGCATGCTGGCCAACTACGTGCAGGGCATCCTGCAGCGCCTGCAGTTGCCAGCCGACGCCAGCATGGCGATGGTCTCGACCGTGGCGGCGGACCTGGGGCACACCGTGCTGTTCGGCGCGCTGGC > 1:575604/1‑150 CCCAAGGGCGTGGTCGTTGCCCACGGCATGCTGGCCAACTACGTGCAGGGCATCCTGCAGCGCCTGCAGTTGCCAGCCGACGCCAGCATGGCGATGGTCTCGACCGTGGCGGCGGACCTGGGGCACACCGTGCTGTTCGGCGCGCTGGCA > 2:835257/1‑150 TGCTCACGCGACATCAGGTGCAGCAGACGGCCGGATGCCAGCGCGCCGAACAGCACGGTGTGCCCCAGGTCCGCCGCCACGGTCGAGACCATCGCCATGCTGGCGTCGGCTGGCAACTGCAGGCGCTGCAGGATGCCCTGCACGTAGTTGGCCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4785218‑4785373‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccagcCCAAGGGCGTGGTCGTTGCCCACGGCATGCTGGCCAACTACGTGCAGGGCATCCTGCAGCGCCTGCAGTTGCCAGCCGACGCCAGCATGGCGATGGTCTCGACCGTGGCGGCGGACCTGGGGCACACCGTGCTGTTCGGCGCGCTGGCA < NC_002947/4785401‑4785253 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |