New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4785373	31 (0.980)	3 (0.100)	3/234	NT	8.7%	coding (1986/7887 nt)	pvdJ	non‑ribosomal peptide synthetase
	?	NC_002947	= 4785401	34 (1.140)					coding (1958/7887 nt)	pvdJ	non‑ribosomal peptide synthetase

GCGACATCAGGTGCAGCAGACGGCCGGATGCCAGCGCGCCGAACAGCACGGTGTGCCCCAGGTCCGCCGCCACGGTCGAGACCATCGCCATGCTGGCGTCGGCTGGCAACTGCAGGCGCTGCAGGATGCCCTGCACGTAGTTGGCCAGCATGCCGTGGGCAACGACCACGCCCTTGGGCTGGCCGGTGGAGCCGGAAGTGTAGATGACATAGGCCGGTTGGGCGGCGCAGACCTCGATGGCCAGCGGCGTCGTCGGGCACTGTCGCCAGGCGGCAGCATCGAAAGGCAATACCGGGCA  >  NC_002947/4785225‑4785522                                                                                                                                                     |                                                                                                                                                      gcgACATCAGGTGCAGCAGACGGCCGGATGCCAGCGCGCCGAACAGCACGGTGTGCCCCAGGTCCGCCGCCACGGTCGAGACCATCGCCATGCTGGCGTCGGCTGGCAACTGCAGGCGCTGCAGGATGCCCTGCACGTAGTTGGCCAGCa                                                                                                                                                      >  1:243887/1‑150 (MQ=255) gcgACATCAGGTGCAGCAGACGGCCGGATGCCAGCGCGCCGAACAGCACGGTGTGCCCCAGGTCCGCCGCCACGGTCGAGACCATCGCCATGCTGGCGTCGGCTGGCAACTGCAGGCGCTGCAGGATGCCCTGCACGTAGTTGGCCAGCa                                                                                                                                                      >  1:409871/1‑150 (MQ=255)       tCAGGTGCAGCAGACGGCCGGATGCCAGCGCGCCGAACAGCACGGTGTGCCCCAGGTCCGCCGCCACGGTCGAGACCATCGCCATGCTGGCGTCGGCTGGCAACTGCAGGCGCTGCAGGATGCCCTGCACGTAGTTGGCCAGCATGCCGt                                                                                                                                                >  1:101820/1‑150 (MQ=255)         aGGTGCAGCAGACGGCCGGATGCCAGCGCGCCGAACAGCACGGTGTGCCCCAGGTCCGCCGCCACGGTCGAGACCATCGCCATGCTGGCGTCGGCTGGCAACTGCAGGCGCTGCAGGATGCCCTGCACGTAGTTGGCCAGCATGCCGTgg                                                                                                                                              <  2:407234/150‑1 (MQ=255)              cagcagACGGCCGGATGCCAGCGCGCCGAACAGCACGGTGTGCCCCAGGTCCGCCGCCACGGTCGAGACCATCGCCATGCTGGCGTCGGCTGGCAACTGCAGGCGCTGCAGGATGCCCTGCACGTAGTTGGCCAGCATGCCGTGGGCAAc                                                                                                                                         >  1:835257/1‑150 (MQ=255)                  agACGGCCGGATGCCAGCGCGCCGAACAGCACGGTGTGCCCCAGGTCCGCCGCCACGGTCGAGACCATCGCCATGCTGGCGTCGGCTGGCAACTGCAGGCGCTGCAGGATGCCCTGCACGTAGTTGGCCAGCATGCCGTGGGCAACGAcc                                                                                                                                     <  2:409871/150‑1 (MQ=255)                             tGCCAGCGCGCCGAACAGCACGGTGTGCCCCAGGTCCGCCGCCACGGTCGAGACCATCGCCATGCTGGCGTCGGCTGGCAACTGCAGGCGCTGCAGGATGCCCTGCACGTAGTTGGCCAGCATGCCGTGGGCAACGACCACGCCCTTGGg                                                                                                                          >  2:835257‑M2/1‑149 (MQ=255)                              gCCAGCGCGCCGAACAGCACGGTGTGCCCCAGGTCCGCCGCCACGGTCGAGACCATCGCCATGCTGGCGTCGGCTGGCAACTGCAGGCGCTGCAGGATGCCCTGCACGTAGTTGGCCAGCATGCCGTGGGCAACGACCACGCCCTTGGgc                                                                                                                         >  1:575604‑M2/1‑148 (MQ=255)                                  gcgcgcCGAACAGCACGGTGTGCCCCAGGTCCGCCGCCACGGTCGAGACCATCGCCATGCTGGCGTCGGCTGGCAACTGCAGGCGCTGCAGGATGCCCTGCACGTAGTTGGCCAGCATGCCGTGGGCAACGACCACGCCCTTGGgctggc                                                                                                                     <  1:812849‑M2/150‑7 (MQ=255)                                  gcgcgcCGAACAGCACGGTGTGCCCCAGGTCCGCCGCCACGGTCGAGACCATCGCCATGCTGGCGACGGCTGGCAACTGCAGGCGCTGCAGGATGCCCTGCACGTAGTTGGCCAGCATGCCGTGGGCAACGACCACGCCCTTGGgctggc                                                                                                                     >  2:454962‑M2/1‑144 (MQ=255)                                    gcgcCGAACAGCACGGTGTGCCCCAGGTCCGCCGCCACGGTCGAGACCATCGCCATGCTGGCGTCGGCTGGCAACTGCAGGCGCTGCAGGATGCCCTGCACGTAGTTGGCCAGCccaagggcgtggtcgttgcccacggcatgctggcca                                                                                                                   <  2:420246‑M1/150‑37 (MQ=255)                                       ccGAACAGCACGGTGTGCCCCAGGTCCGCCGCCACGGTCGAGACCATCGCCATGCTGGCGTCGGCTGGCAACTGCAGGCGCTGCAGGATGCCCTGCACGTAGTTGGCCAGCATGCCGTGGGCAACGACCACGCCCTTGGGCTGGCCGGTg                                                                                                                <  2:812849/150‑1 (MQ=255)                                         gAACAGCACGGTGTGCCCCAGGTCCGCCGCCACGGTCGAGACCATCGCCATGCTGGCGTCGGCTGGCAACTGCAGGCGCTGCAGGATGCCCTGCACGTAGTTGGCCAGCATGCCGTGGGCAACGACCACGCCCTTGGGCTGGCCGGTGGa                                                                                                              >  2:288709/1‑150 (MQ=255)                                           aCAGCACGGTGTGCCCCAGGTCCGCCGCCACGGTCGAGACCATCGCCATGCTGGCGTCGGCTGGCAACTGCAGGCGCTGCAGGATGCCCTGCACGTAGTTGGCCAGCATGCCGTGGGCAACGACCACGCCCTTGGGCTGGCCGGTGGAGc                                                                                                            <  2:101820/150‑1 (MQ=255)                                                aCGGTGTGCCCCAGGTCCGCCGCCACGGTCGAGACCATCGCCATGCTGGCGTCGGCTGGCAACTGCAGGCGCTGCAGGATGCCCTGCACGTAGTTGGCCAGCATGCCGTGGGCAACGACCACGCCCTTGGGCTGGCCGGTGGAGCCGGaa                                                                                                       >  2:482698/1‑150 (MQ=255)                                                    tgtgCCCCAGGTCCGCCGCCACGGTCGAGACCATCGCCATGCTGGCGTCGGCTGGCAACTGCAGGCGCTGCAGGATGCCCTGCACGTAGTTGGCCAGCATGCCGTGGGCAACGACCACGCCCTTGGGCTGGCCGGTGGAGc                                                                                                            >  2:555820/1‑141 (MQ=255)                                                    tgtgCCCCAGGTCCGCCGCCACGGTCGAGACCATCGCCATGCTGGCGTCGGCTGGCAACTGCAGGCGCTGCAGGATGCCCTGCACGTAGTTGGCCAGCATGCCGTGGGCAACGACCACGCCCTTGGGCTGGCCGGTGGAGc                                                                                                            <  1:555820/141‑1 (MQ=255)                                                      tgCCCCAGGTCCGCCGCCACGGTCGAGACCATCGCCATGCTGGCGTCGGCTGGCAACTGCAGGCGCTGCAGGATGCCCTGCACGTAGTTGGCCAGCATGCCGTGGGCAACGACCACGCCCTTGGGCTGGCCGGTGGAGCCGGAAGTGTAg                                                                                                 <  1:482698/150‑1 (MQ=255)                                                        ccccAGGTCCGCCGCCACGGTCGAGACCATCGCCATGCTGGCGTCGGCTGGCAACTGCAGGCGCTGCAGGATGCCCTGCACGTAGTTGGCCAGCATGCCGTGGGCAACGACCACGCCCTTGGGCTGGCCGGTGGAGCCGGAAGTGTAGAt                                                                                               >  2:530654/1‑150 (MQ=255)                                                                  gccgccACGGTCGAGACCATCGCCATGCTGGCGTCGGCTGGCAACTGCAGGCGCTGCAGGATGCCCTGCACGTAGTTGGCCAGCATGCCGTGGGCAACGACCACGCCCTTGGGCTGGCCGGTGGAGc                                                                                                            <  2:294799/127‑1 (MQ=255)                                                                  gccgccACGGTCGAGACCATCGCCATGCTGGCGTCGGCTGGCAACTGCAGGCGCTGCAGGATGCCCTGCACGTAGTTGGCCAGCATGCCGTGGGCAACGACCACGCCCTTGGGCTGGCCGGTGGAGc                                                                                                            >  1:294799/1‑127 (MQ=255)                                                                     gccACGGGCGAGACCATCGCCATGCTGGCGTCGGCTGGCAACTGCAGGCGCTGCAGGATGCCCTGCACGTAGTTGGCCAGCATGCCGTGGGCAACGACCACGCCCTTGGGCTGGCCGGTGGAGCCGGAAGTGTAGATGACATAGGCCGGt                                                                                  >  2:503471/1‑150 (MQ=255)                                                                        aCGGTCGAGACCATCGCCATGCTGGCGTCGGCTGGCAACTGCAGGCGCTGCAGGATGCCCTGCACGTAGTTGGCCAGCATGCCGTGGGCAACGACCACGCCCTTGGGCTGGCCGGTGGAGCCGGAAGTGTAGATGACATAGGCCGGTTgg                                                                               <  2:243887/150‑1 (MQ=255)                                                                               agaCCATCGCCATGCTGGCGTCGGCTGGCAACTGCAGGCGCTGCAGGATGCCCTGCACGTAGTTGGCCAGCccaagggcgtggtcgttgcccacggcatgctggccaa                                                                                                                  <  2:206109‑M1/108‑38 (MQ=255)                                                                               agaCCATCGCCATGCTGGCGTCGGCTGGCAACTGCAGGCGCTGCAGGATGCCCTGCACGTAGTTGGCCAGCccaagggcgtggtcgttgcccacggcatgctggccaa                                                                                                                  >  1:206109‑M1/1‑71 (MQ=255)                                                                                gaCCATCGCCATGCTGGCGTCGGCTGGCAACTGCAGGCGCTGCAGGATGCCCTGCACGTAGTTGGCCAGCATGCCGTGGGCAACGACCACGCCCTTGGGCTGGCCGGTGGAGCCGGAAGTGTAGATGACATAGGCCGGTTGGGCGGCGCa                                                                       <  1:288709/150‑1 (MQ=255)                                                                                   cATCGCCATGCTGGCGTCGGCTGGCAACTGCAGGCGCTGCAGGATGCCCTGCACGTAGTTGGCCAGCATGCCGTGGGCAACGACCACGCCCTTGGGCTGGCCGGTGGAGCCGGAAGTGTAGATGACATAGGCCGGTTGGGCGGCGCAGAc                                                                    >  2:575356/1‑150 (MQ=255)                                                                                    aTCGCCATGCTGGCGTCGGCTGGCAACTGCAGGCGCTGCAGGATGCCCTGCACGTAGTTGGCCAGCATGCCGTGGGCAACGACCACGCCCTTGGGCTGGCCGGTGGAGCCGGAAGTGTAGATGACATAGGCCGGTTGGGCGGCGCAGAcc                                                                   >  1:365170/1‑150 (MQ=255)                                                                                    aTCGCCATGCTGGCGTCGGCTGGCAACTGCAGGCGCTGCAGGATGCCCTGCACGTAGTTGGCCAGCATGCCGTGGGCAACGACCACGCCCTTGGGCTGGCCGGTGGAGCCGGAAGTGTAGATGACATAGGCCGGTTGGGCGGCGCAGAcc                                                                   >  1:286043/1‑150 (MQ=255)                                                                                        ccATGCTGGCGTCGGCTGGCAACTGCAGGCGCTGCAGGATGCCCTGCACGTAGTTGGCCAGCATGCCGTGGGCAACGACCACGCCCTTGGGCTGGCCGGTGGAGCCGGAAGTGTAGATGACATAGGCCGGTTGGGCGGCGCAGACCTCGa                                                               >  1:321215/1‑150 (MQ=255)                                                                                          ttGCTGGCGTCGGCTGGCAACTGCAGGCGCTGCAGGATGCCCTGCACGTAGTTGGCCAGCATGCCGTGGGCAACGACCACGCCCTTGGGCTGGCCGGTGGAGCCGGAAGTGTAGATGACATAGGCCGGTTGGGCGGCGCAGACCTCGATg                                                             <  2:84934/149‑1 (MQ=255)                                                                                                gCGTCGGCTGGCAACTGCAGGCGCTGCAGGATGCCCTGCACGTAGTTGGCCAGCATGCCGTGGGCAACGACCACGCCCTTGGGCTGGCCGGTGGAGCCGGAAGTGTAGATGACATAGGCCGGTTGGGCGGCGCAGACCTCGATGGCCAgc                                                       <  2:303486/150‑1 (MQ=255)                                                                                                  gTCGGCTGACAACTGCAGGCGCTGCAGGATGCCCGGCACGCAGTTGGCCAGCTTGCCGTGGGCAACGCCCACGACCTTGGGCTGGCCGGTGGAGCCGTAAGTGTAGATGACATAGACTGGTTGGGCGGCGCAATCGCCGATGGCCAggga                                                     >  2:333114/1‑147 (MQ=255)                                                                                                             aCTGCAGGCGCTGCAGGATGCCCTGCACGTAGTTGGCCAGCATGCCGTGGGCAACGACCACGCCCTTGGGCTGGCCGGTGGAGCCGGAAGTGTAGATGACATAGGCCGGTTGGGCGGCGCAGACCTCGATGGCCAGCGGCGTCGTCGGGc                                          <  1:608976/150‑1 (MQ=255)                                                                                                                          cAGGATGCCCTGCACGTAGTTGGCCAGCATGCCGTGGGCAACGACCACGCCCTTGGGCTGGCCGGTGGAGCCgg                                                                                                         >  2:558554/1‑74 (MQ=255)                                                                                                                          cAGGATGCCCTGCACGTAGTTGGCCAGCATGCCGTGGGCAACGACCACGCCCTTGGGCTGGCCGGTGGAGCCgg                                                                                                         <  1:558554/74‑1 (MQ=255)                                                                                                                                            gTTGGCCAGCATGCCGTGGGCAACGACCACGCCCTTGGGCTGGCCGGTGGAGCCGGAAGTGTAGATGACATAGGCCGGTTGGGCGGCGCAGACCTCGATGGCCAGCGGCGTCGTCGGGCACTGt                                     >  2:440186/1‑124 (MQ=255)                                                                                                                                            gTTGGCCAGCATGCCGTGGGCAACGACCACGCCCTTGGGCTGGCCGGTGGAGCCGGAAGTGTAGATGACATAGGCCGGTTGGGCGGCGCAGACCTCGATGGCCAGCGGCGTCGTCGGGCACTGt                                     <  1:440186/124‑1 (MQ=255)                                                                                                                                             ttGGCCAGCATGCCGTGGGCAACGACCACGCCCTTGGgctggccaactacgtgcagggcatcctgcagcgcctgcagttgccagccgacgccagcatggcgatggtct                                                    <  2:206109‑M2/108‑72 (MQ=255)                                                                                                                                             ttGGCCAGCATGCCGTGGGCAACGACCACGCCCTTGGgctggccaactacgtgcagggcatcctgcagcgcctgcagttgccagccgacgccagcatggcgatggtct                                                    >  1:206109‑M2/1‑37 (MQ=255)                                                                                                                                             ttGGCCAGCATGCCGTGGGCAACGACCACGCCCTTGGGCTGGCCGGTGGAGCCGGAAGTGTAGATGACATAGGCCGGTTGGGCGGCGCAGACCTCGATGGCCAGCGGCGTCGTCGGGCACTGTCGCCAGGCGGCAGCATCGAAAGGCAAt          >  2:38259/1‑150 (MQ=255)                                                                                                                                              tGGCCAGCATGCCGTGGGCAACGACCACGCCCTTGGgctggccaactacgtgcagggcatcctgcagcgcctgcagttgccagccgacgccagcatggcgatggtctcgaccgtggcggcggacctggggcacaccgtgctgttcggcgc         <  2:420246‑M2/150‑115 (MQ=255)                                                                                                                                              tGGCCAGCATGCCGTGGGCAACGACCACGCCCTTGGGCTGGCCGGTGGAGCCGGAAGTGTAGATGACATAGGCCGGTTGGGCGGCGCAGACCTCGATGGCCAGCGGCGTCGTCGGGCACTGTCGCCAGGCGGCAGCATCGAAAGGCAATa         <  1:446423/150‑1 (MQ=255)                                                                                                                                                gCCAGCccaagggcgtggtcgttgcccacggcatgctggccaactacgtgcagggcatcctgcagcgcctgcagttgccagccgtcgccagcatggcgatggtctcgaccgtggcggcggacctggggcacaccgtgctgttcggcgcgc       >  2:454962‑M1/1‑6 (MQ=255)                                                                                                                                                gCCAGCccaagggcgtggtcgttgcccacggcatgctggccaactacgtgcagggcatcctgcagcgcctgcagttgccagccgacgccagcatggcgatggtctcgaccgtggcggcggacctggggcacaccgtgctgttcggcgcgc       <  1:812849‑M1/150‑145 (MQ=255)                                                                                                                                                    gCccaagggcgtggtcgttgcccacggcatgctggccaactacgtgcagggcatcctgcagcgcctgcagttgccagccgacgccagcatggcgatggtctcgaccgtggcggcggacctggggcacaccgtgctgttcggcgcgctggc   >  1:575604‑M1/1‑2 (MQ=255)                                                                                                                                                     cccaagggcgtggtcgttgcccacggcatgctggccaactacgtgcagggcatcctgcagcgcctgcagttgccagccgacgccagcatggcgatggtctcgaccgtggcggcggacctggggcacaccgtgctgttcggcgcgctggca  >  2:835257‑M1/1‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                      GCGACATCAGGTGCAGCAGACGGCCGGATGCCAGCGCGCCGAACAGCACGGTGTGCCCCAGGTCCGCCGCCACGGTCGAGACCATCGCCATGCTGGCGTCGGCTGGCAACTGCAGGCGCTGCAGGATGCCCTGCACGTAGTTGGCCAGCATGCCGTGGGCAACGACCACGCCCTTGGGCTGGCCGGTGGAGCCGGAAGTGTAGATGACATAGGCCGGTTGGGCGGCGCAGACCTCGATGGCCAGCGGCGTCGTCGGGCACTGTCGCCAGGCGGCAGCATCGAAAGGCAATACCGGGCA  >  NC_002947/4785225‑4785522

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.