New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 478537331 (0.980)3 (0.100) 3/234 NT 8.7% coding (1986/7887 nt) pvdJ non‑ribosomal peptide synthetase
?NC_002947 = 4785401 34 (1.140)coding (1958/7887 nt) pvdJ non‑ribosomal peptide synthetase

TGCCAGCGCGCCGAACAGCACGGTGTGCCCCAGGTCCGCCGCCACGGTCGAGACCATCGCCATGCTGGCGTCGGCTGGCAACTGCAGGCGCTGCAGGATGCCCTGCACGTAGTTGGCCAGCATGCCGTGGGCAACGACCACGCCCTTGGGCTGGCCGGTGGAGCCGGAAGTGTAGATGACATAGGCCGGTTGGGCGGCGCAGACCTCGATGGCCAGCGGCGTCGTCGGGCACTGTCGCCAGGCGGCAGCATCGAAAGGCAATACCGGGCACGCGGCGAAACCACCGAGGGCAAGCTTG  >  NC_002947/4785253‑4785550
                                                                                                                                                    |                                                                                                                                                     
tGCCAGCGCGCCGAACAGCACGGTGTGCCCCAGGTCCGCCGCCACGGTCGAGACCATCGCCATGCTGGCGTCGGCTGGCAACTGCAGGCGCTGCAGGATGCCCTGCACGTAGTTGGCCAGCATGCCGTGGGCAACGACCACGCCCTTGGg                                                                                                                                                      >  2:835257‑M2/1‑149 (MQ=255)
 gCCAGCGCGCCGAACAGCACGGTGTGCCCCAGGTCCGCCGCCACGGTCGAGACCATCGCCATGCTGGCGTCGGCTGGCAACTGCAGGCGCTGCAGGATGCCCTGCACGTAGTTGGCCAGCATGCCGTGGGCAACGACCACGCCCTTGGgc                                                                                                                                                     >  1:575604‑M2/1‑148 (MQ=255)
     gcgcgcCGAACAGCACGGTGTGCCCCAGGTCCGCCGCCACGGTCGAGACCATCGCCATGCTGGCGTCGGCTGGCAACTGCAGGCGCTGCAGGATGCCCTGCACGTAGTTGGCCAGCATGCCGTGGGCAACGACCACGCCCTTGGgctggc                                                                                                                                                 <  1:812849‑M2/150‑7 (MQ=255)
     gcgcgcCGAACAGCACGGTGTGCCCCAGGTCCGCCGCCACGGTCGAGACCATCGCCATGCTGGCGACGGCTGGCAACTGCAGGCGCTGCAGGATGCCCTGCACGTAGTTGGCCAGCATGCCGTGGGCAACGACCACGCCCTTGGgctggc                                                                                                                                                 >  2:454962‑M2/1‑144 (MQ=255)
          ccGAACAGCACGGTGTGCCCCAGGTCCGCCGCCACGGTCGAGACCATCGCCATGCTGGCGTCGGCTGGCAACTGCAGGCGCTGCAGGATGCCCTGCACGTAGTTGGCCAGCATGCCGTGGGCAACGACCACGCCCTTGGGCTGGCCGGTg                                                                                                                                            <  2:812849/150‑1 (MQ=255)
            gAACAGCACGGTGTGCCCCAGGTCCGCCGCCACGGTCGAGACCATCGCCATGCTGGCGTCGGCTGGCAACTGCAGGCGCTGCAGGATGCCCTGCACGTAGTTGGCCAGCATGCCGTGGGCAACGACCACGCCCTTGGGCTGGCCGGTGGa                                                                                                                                          >  2:288709/1‑150 (MQ=255)
              aCAGCACGGTGTGCCCCAGGTCCGCCGCCACGGTCGAGACCATCGCCATGCTGGCGTCGGCTGGCAACTGCAGGCGCTGCAGGATGCCCTGCACGTAGTTGGCCAGCATGCCGTGGGCAACGACCACGCCCTTGGGCTGGCCGGTGGAGc                                                                                                                                        <  2:101820/150‑1 (MQ=255)
                   aCGGTGTGCCCCAGGTCCGCCGCCACGGTCGAGACCATCGCCATGCTGGCGTCGGCTGGCAACTGCAGGCGCTGCAGGATGCCCTGCACGTAGTTGGCCAGCATGCCGTGGGCAACGACCACGCCCTTGGGCTGGCCGGTGGAGCCGGaa                                                                                                                                   >  2:482698/1‑150 (MQ=255)
                       tgtgCCCCAGGTCCGCCGCCACGGTCGAGACCATCGCCATGCTGGCGTCGGCTGGCAACTGCAGGCGCTGCAGGATGCCCTGCACGTAGTTGGCCAGCATGCCGTGGGCAACGACCACGCCCTTGGGCTGGCCGGTGGAGc                                                                                                                                        >  2:555820/1‑141 (MQ=255)
                       tgtgCCCCAGGTCCGCCGCCACGGTCGAGACCATCGCCATGCTGGCGTCGGCTGGCAACTGCAGGCGCTGCAGGATGCCCTGCACGTAGTTGGCCAGCATGCCGTGGGCAACGACCACGCCCTTGGGCTGGCCGGTGGAGc                                                                                                                                        <  1:555820/141‑1 (MQ=255)
                         tgCCCCAGGTCCGCCGCCACGGTCGAGACCATCGCCATGCTGGCGTCGGCTGGCAACTGCAGGCGCTGCAGGATGCCCTGCACGTAGTTGGCCAGCATGCCGTGGGCAACGACCACGCCCTTGGGCTGGCCGGTGGAGCCGGAAGTGTAg                                                                                                                             <  1:482698/150‑1 (MQ=255)
                           ccccAGGTCCGCCGCCACGGTCGAGACCATCGCCATGCTGGCGTCGGCTGGCAACTGCAGGCGCTGCAGGATGCCCTGCACGTAGTTGGCCAGCATGCCGTGGGCAACGACCACGCCCTTGGGCTGGCCGGTGGAGCCGGAAGTGTAGAt                                                                                                                           >  2:530654/1‑150 (MQ=255)
                                     gccgccACGGTCGAGACCATCGCCATGCTGGCGTCGGCTGGCAACTGCAGGCGCTGCAGGATGCCCTGCACGTAGTTGGCCAGCATGCCGTGGGCAACGACCACGCCCTTGGGCTGGCCGGTGGAGc                                                                                                                                        <  2:294799/127‑1 (MQ=255)
                                     gccgccACGGTCGAGACCATCGCCATGCTGGCGTCGGCTGGCAACTGCAGGCGCTGCAGGATGCCCTGCACGTAGTTGGCCAGCATGCCGTGGGCAACGACCACGCCCTTGGGCTGGCCGGTGGAGc                                                                                                                                        >  1:294799/1‑127 (MQ=255)
                                        gccACGGGCGAGACCATCGCCATGCTGGCGTCGGCTGGCAACTGCAGGCGCTGCAGGATGCCCTGCACGTAGTTGGCCAGCATGCCGTGGGCAACGACCACGCCCTTGGGCTGGCCGGTGGAGCCGGAAGTGTAGATGACATAGGCCGGt                                                                                                              >  2:503471/1‑150 (MQ=255)
                                           aCGGTCGAGACCATCGCCATGCTGGCGTCGGCTGGCAACTGCAGGCGCTGCAGGATGCCCTGCACGTAGTTGGCCAGCATGCCGTGGGCAACGACCACGCCCTTGGGCTGGCCGGTGGAGCCGGAAGTGTAGATGACATAGGCCGGTTgg                                                                                                           <  2:243887/150‑1 (MQ=255)
                                                   gaCCATCGCCATGCTGGCGTCGGCTGGCAACTGCAGGCGCTGCAGGATGCCCTGCACGTAGTTGGCCAGCATGCCGTGGGCAACGACCACGCCCTTGGGCTGGCCGGTGGAGCCGGAAGTGTAGATGACATAGGCCGGTTGGGCGGCGCa                                                                                                   <  1:288709/150‑1 (MQ=255)
                                                      cATCGCCATGCTGGCGTCGGCTGGCAACTGCAGGCGCTGCAGGATGCCCTGCACGTAGTTGGCCAGCATGCCGTGGGCAACGACCACGCCCTTGGGCTGGCCGGTGGAGCCGGAAGTGTAGATGACATAGGCCGGTTGGGCGGCGCAGAc                                                                                                >  2:575356/1‑150 (MQ=255)
                                                       aTCGCCATGCTGGCGTCGGCTGGCAACTGCAGGCGCTGCAGGATGCCCTGCACGTAGTTGGCCAGCATGCCGTGGGCAACGACCACGCCCTTGGGCTGGCCGGTGGAGCCGGAAGTGTAGATGACATAGGCCGGTTGGGCGGCGCAGAcc                                                                                               >  1:365170/1‑150 (MQ=255)
                                                       aTCGCCATGCTGGCGTCGGCTGGCAACTGCAGGCGCTGCAGGATGCCCTGCACGTAGTTGGCCAGCATGCCGTGGGCAACGACCACGCCCTTGGGCTGGCCGGTGGAGCCGGAAGTGTAGATGACATAGGCCGGTTGGGCGGCGCAGAcc                                                                                               >  1:286043/1‑150 (MQ=255)
                                                           ccATGCTGGCGTCGGCTGGCAACTGCAGGCGCTGCAGGATGCCCTGCACGTAGTTGGCCAGCATGCCGTGGGCAACGACCACGCCCTTGGGCTGGCCGGTGGAGCCGGAAGTGTAGATGACATAGGCCGGTTGGGCGGCGCAGACCTCGa                                                                                           >  1:321215/1‑150 (MQ=255)
                                                             ttGCTGGCGTCGGCTGGCAACTGCAGGCGCTGCAGGATGCCCTGCACGTAGTTGGCCAGCATGCCGTGGGCAACGACCACGCCCTTGGGCTGGCCGGTGGAGCCGGAAGTGTAGATGACATAGGCCGGTTGGGCGGCGCAGACCTCGATg                                                                                         <  2:84934/149‑1 (MQ=255)
                                                                   gCGTCGGCTGGCAACTGCAGGCGCTGCAGGATGCCCTGCACGTAGTTGGCCAGCATGCCGTGGGCAACGACCACGCCCTTGGGCTGGCCGGTGGAGCCGGAAGTGTAGATGACATAGGCCGGTTGGGCGGCGCAGACCTCGATGGCCAgc                                                                                   <  2:303486/150‑1 (MQ=255)
                                                                     gTCGGCTGACAACTGCAGGCGCTGCAGGATGCCCGGCACGCAGTTGGCCAGCTTGCCGTGGGCAACGCCCACGACCTTGGGCTGGCCGGTGGAGCCGTAAGTGTAGATGACATAGACTGGTTGGGCGGCGCAATCGCCGATGGCCAggga                                                                                 >  2:333114/1‑147 (MQ=255)
                                                                                aCTGCAGGCGCTGCAGGATGCCCTGCACGTAGTTGGCCAGCATGCCGTGGGCAACGACCACGCCCTTGGGCTGGCCGGTGGAGCCGGAAGTGTAGATGACATAGGCCGGTTGGGCGGCGCAGACCTCGATGGCCAGCGGCGTCGTCGGGc                                                                      <  1:608976/150‑1 (MQ=255)
                                                                                             cAGGATGCCCTGCACGTAGTTGGCCAGCATGCCGTGGGCAACGACCACGCCCTTGGGCTGGCCGGTGGAGCCgg                                                                                                                                     <  1:558554/74‑1 (MQ=255)
                                                                                             cAGGATGCCCTGCACGTAGTTGGCCAGCATGCCGTGGGCAACGACCACGCCCTTGGGCTGGCCGGTGGAGCCgg                                                                                                                                     >  2:558554/1‑74 (MQ=255)
                                                                                                               gTTGGCCAGCATGCCGTGGGCAACGACCACGCCCTTGGGCTGGCCGGTGGAGCCGGAAGTGTAGATGACATAGGCCGGTTGGGCGGCGCAGACCTCGATGGCCAGCGGCGTCGTCGGGCACTGt                                                                 <  1:440186/124‑1 (MQ=255)
                                                                                                               gTTGGCCAGCATGCCGTGGGCAACGACCACGCCCTTGGGCTGGCCGGTGGAGCCGGAAGTGTAGATGACATAGGCCGGTTGGGCGGCGCAGACCTCGATGGCCAGCGGCGTCGTCGGGCACTGt                                                                 >  2:440186/1‑124 (MQ=255)
                                                                                                                ttGGCCAGCATGCCGTGGGCAACGACCACGCCCTTGGgctggccaactacgtgcagggcatcctgcagcgcctgcagttgccagccgacgccagcatggcgatggtct                                                                                <  2:206109‑M2/108‑72 (MQ=255)
                                                                                                                ttGGCCAGCATGCCGTGGGCAACGACCACGCCCTTGGgctggccaactacgtgcagggcatcctgcagcgcctgcagttgccagccgacgccagcatggcgatggtct                                                                                >  1:206109‑M2/1‑37 (MQ=255)
                                                                                                                ttGGCCAGCATGCCGTGGGCAACGACCACGCCCTTGGGCTGGCCGGTGGAGCCGGAAGTGTAGATGACATAGGCCGGTTGGGCGGCGCAGACCTCGATGGCCAGCGGCGTCGTCGGGCACTGTCGCCAGGCGGCAGCATCGAAAGGCAAt                                      >  2:38259/1‑150 (MQ=255)
                                                                                                                 tGGCCAGCATGCCGTGGGCAACGACCACGCCCTTGGgctggccaactacgtgcagggcatcctgcagcgcctgcagttgccagccgacgccagcatggcgatggtctcgaccgtggcggcggacctggggcacaccgtgctgttcggcgc                                     <  2:420246‑M2/150‑115 (MQ=255)
                                                                                                                 tGGCCAGCATGCCGTGGGCAACGACCACGCCCTTGGGCTGGCCGGTGGAGCCGGAAGTGTAGATGACATAGGCCGGTTGGGCGGCGCAGACCTCGATGGCCAGCGGCGTCGTCGGGCACTGTCGCCAGGCGGCAGCATCGAAAGGCAATa                                     <  1:446423/150‑1 (MQ=255)
                                                                                                                           gCCGTGGGCAACGACCACGCCCTTGGGCTGGCCGGTGGAGCCGGAAGTGTAGATGACATAGGCCGGTTGGGCGGCGCAGACCTCGATGGCCAGCGGCGTCGTCGGGCACTGTCGCCAGGCGGCAGCATCGAAAGGCAATACCGGGCAcgc                           <  1:38259/150‑1 (MQ=255)
                                                                                                                                   cAACGACCACGCCCTTGGGCTGGCCGGTGGAGCCGGAAGTGTAGATGACATAGGCCGGTTGGGCGGCGCAGACCTCGATGGCCAGCGGCGTCGTCGGGCACTGTCGCCAGGCGGCAGCATCGAAAGGCAATACCCGGCACGCGGCGAAac                   >  2:592717/1‑150 (MQ=255)
                                                                                                                                        aCCACGCCCTTGGGCTGGCCGGTGGAGCCGGAAGTGTAGATGACATAGGCCGGTTGGGCGGCGCAGACCTCGATGGCCAGCGGCGTCGTCGGGCACTGTCGCCAggc                                                         >  2:221211/1‑107 (MQ=255)
                                                                                                                                        aCCACGCCCTTGGGCTGGCCGGTGGAGCCGGAAGTGTAGATGACATAGGCCGGTTGGGCGGCGCAGACCTCGATGGCCAGCGGCGTCGTCGGGCACTGTCGCCAggc                                                         <  1:221211/107‑1 (MQ=255)
                                                                                                                                          cACGCCCTTGGGCTGGCCGGTGGAGCCGGAAGTGTAGATGACATAGGCCGGTTGGGCGGCGCAGACCTCGATGGCCAgctgcg                                                                               <  2:527511/83‑1 (MQ=255)
                                                                                                                                          cACGCCCTTGGGCTGGCCGGTGGAGCCGGAAGTGTAGATGACATAGGCCGGTTGGGCGGCGCAGACCTCGATGGCCAgcggcg                                                                               >  1:527511/1‑83 (MQ=255)
                                                                                                                                          cACGCCCTTGGGCTGGCCGGTGGAGCCGGAAGTGTAGATGACATAGGCCGGTTGGGCGGCGCAGACCTCGATGGCCAGCGGCGTCGTCGGGCACTGTCGCCAGGCGGCAGCATCGAAAGGCAATACCGGGCACGCGGCGAAACCACCGAg            >  1:618607/1‑150 (MQ=255)
                                                                                                                                               ccTTGGGCTGGCCGGTGGAGCCGGAAGTGTAGATGACATAGGCCGGTTGGGCGGAGCAGACCTCGATGGCCAGCGGCGTCGTCGGGCACTGTCGCCAGGCGGCAGCATCGAAAGGCAATACCGGGCACGCGGCGAAACCACCGAGGGCaa       >  1:562620/1‑150 (MQ=255)
                                                                                                                                                   gggCTGGCCGGTGGAGCCGGAAGTGTAGATGACATAGGCCGGTTGGGCGGCGCAGACCTCGATGGCCAGCGGCGTCGTCGGGCACTGTCGCCAGGCGGCAGCATCGAAAGGCAATACCGGGCACGCGGCGAAACCACCGAGGGCAAGCtt   <  1:503471/150‑1 (MQ=255)
                                                                                                                                                    ggCTGGCCGGTGGAGCCGGAAGTGTAGATGACATAGGCCGGTTGGGCGGCGCAGACCTCGATGGCCAGAGGCGTTTTGGGGCACTGTCGCCAGGCGGCAGCATCGAAAGGCAATACCGGGCACGCGGCGAAACCACCGAGGGCAAGCTTg  <  1:530654/150‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                     
TGCCAGCGCGCCGAACAGCACGGTGTGCCCCAGGTCCGCCGCCACGGTCGAGACCATCGCCATGCTGGCGTCGGCTGGCAACTGCAGGCGCTGCAGGATGCCCTGCACGTAGTTGGCCAGCATGCCGTGGGCAACGACCACGCCCTTGGGCTGGCCGGTGGAGCCGGAAGTGTAGATGACATAGGCCGGTTGGGCGGCGCAGACCTCGATGGCCAGCGGCGTCGTCGGGCACTGTCGCCAGGCGGCAGCATCGAAAGGCAATACCGGGCACGCGGCGAAACCACCGAGGGCAAGCTTG  >  NC_002947/4785253‑4785550

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.