| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4884432 | 41 (1.290) | 6 (0.210) | 5/222 | NT | 14.5% | intergenic (+53/+76) | PP_4293/yedI | hypothetical protein/inner membrane protein |
| ? | NC_002947 | = 4884469 | 34 (1.200) | intergenic (+90/+39) | PP_4293/yedI | hypothetical protein/inner membrane protein | |||||
GTGGGTGTGGAGTATGACTACTGGAAGAACAAGTACGGCATCAAGGACAGCGATGCCTTCACTACCGACCAGAACACCATGAGCTTCTTGGTCAAGGTTCACTTCTGACCTGAGTTAGCGGGGCCGCTTTGCGGCCCATTCGCGGGTAAACCCGCTCCTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4884272‑4884432‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aacccgctcctacCAGGTACCGCGTTTGCCTTGAACCCGGCGCGTCCCCTGTAGGAGCGGGTTTACCCGCGAATGGGCCGCAAAGCGGCCCCGCTAACTCAGGTCAGAAGTGAACCTTGACCAAGAAGCTCATGGTGTTCTGGTCGGTAGTGAAGGCATCG < NC_002947/4884469‑4884322 GTGGGTGTGGAGTATGACTACTGGAAGAACAAGTACGGCATCAAGGACAGCGATGCCTTCACTACCGACCAGAACACCATGAGCTTCTTGGTCAAGGTTCACTTCTGACCTGAGTTAGCGGGGCCGCTTTGCGGCCCATTCGCGGGTAAA > 1:174131/1‑150GTGGGTGTGGAGTATGACTACTGGAAGAACAAGTACGGCATCAAGGACAGCGATGCCTTCACTACCGACCAGAACACCATGAGCTTCTTGGTCAAGGTTCACTTCTGACCTGAGTTAGCGGGGCCGCTTTGCGGCCCATTCGCGGGTAAA > 2:559182/1‑150 TGTGGAGTATGACTACTGGAAGAACAAGTACGGCATCAAGGACAGCGATGCCTTCACTACCGACCAGAACACCATGAGCTTCTTGGTCAAGGTTCACTTCTGACCTGAGTTAGCGGGGCCGCTTTGCGGCCCATTCGCGGGTAAACCCGC > 2:442648/1‑150 TGGAGTATGACTACTGGAAGAACAAGTACGGCATCAAGGACAGCGATGCCTTCACTACCGACCAGAACACCATGAGCTTCTTGGTCAAGGTTCACTTCTGACCTGAGTTAGCGGGGCCGCTTTGCGGCCCATTCGCGGGTAAACCCGCTC > 2:738695/1‑150 TGGAGTATGACTACTGGAAGAACAAGTACGGCATCAAGGACAGCGATGCCTTCACTACCGACCAGAACACCATGAGCTTCTTGGTCAAGGTTCACTTCTGACCTGAGTTAGCGGGGCCGCTTTGCGGCCCATTCGCGGGTAAACCCGCTC > 1:725502/1‑150 GAACAAGTACGGCATCAAGGACAGCGATGCCTTCACTACCGACCAGAACACCATGAGCTTCTTGGTCAAGGTTCACTTCTGACCTGAGTTAGCGGGGCCGCTTTGCGGCCCATTCGCGGGTAAACCCGCTCCTACCAGGTACCGCGTTTG > 1:403223/1‑150 AGGACAGCGATGCCTTCACTACCGACCAGAACACCATGAGCTTCTTGGTCAAGGTTCACTTCTGACCTGAGTTAGCGGGGCCGCTTTGCGGCCCATTCGCGGGTAAACCCGC < 1:533890/112‑1 AGGACAGCGATGCCTTCACTACCGACCAGAACACCATGAGCTTCTTGGTCAAGGTTCACTTCTGACCTGAGTTAGCGGGGCCGCTTTGCGGCCCATTCGCGGGTAAACCCGC > 2:533890/1‑112 AGCGATGCCTTCACTACCGACCAGAACACCATGAGCTTCTTGGTCAAGGTTCACTTCTGACCTGAGTTAGCGGGGCCGCTTTGCGGCCCATTCGCGGGTAAACCCGCTCCTACCAGGTACCGCGTTTGCCTTGAACCCGGCGCGTCCCCT > 1:337802/1‑150 GATGCCTTCACTACCGACCAGAACACCATGAGCTTCTTGGTCAAGGTTCACTTCTGACCTGAGTTAGCGGGGCCGCTTTGCGGCCCATTCGCGGGTAAACCCGCTCCTACCAGGTACCGCGTTTGCCTTGAACCCGGCGCGTCCCCTGTA < 2:337802/150‑1 GATGCCTTCACTACCGACCAGAACACCATGAGCTTCTTGGTCAAGGTTCACTTCTGACCTGAGTTAGCGGGGCCGCTTTGCGGCCCATTCGCGGGTAAACCCGCTCCTACCAGGTACCGCGTTTGCCTTGAACCCGGCGCGTCCCCTGTA < 2:403223/150‑1 ACCAGAACACCATGAGCTTCTTGGTCAAGGTTCACTTCTGACCTGAGTTAGCGGGGCCGCTTTGCGGCCCATTCGCGGGTAAACCCGCTCCTACCAGGTACCGCGTTTGCCTTGAACCCGGCGCGTCCCCTGTAGGAGCGGG > 2:139992/1‑142 ACCAGAACACCATGAGCTTCTTGGTCAAGGTTCACTTCTGACCTGAGTTAGCGGGGCCGCTTTGCGGCCCATTCGCGGGTAAACCCGCTCCTACCAGGTACCGCGTTTGCCTTGAACCCGGCGCGTCCCCTGTAGGAGCGGG < 1:139992/142‑1 CCAGAACACCATGAGCTTCTTGGTCAAGGTTCACTTCTGACCTGAGTTAGCGGGGCCGCTTTGCGGCCCATTCGCGGGTAAACCCGCTC < 1:36727/89‑1 CCAGAACACCATGAGCTTCTTGGTCAAGGTTCACTTCTGACCTGAGTTAGCGGGGCCGCTTTGCGGCCCATTCGCGGGTAAACCCGCTC > 2:36727/1‑89 AGAACACCATGAGCTTCTTGGTCAAGGTTCACTTCTGACCTGAGTTAGCGGGGCCGCTTTGCGGCCCATTCGCGGGTAAACCCGCTCC > 1:402986/1‑88 AGAACACCATGAGCTTCTTGGTCAAGGTTCACTTCTGACCTGAGTTAGCGGGGCCGCTTTGCGGCCCATTCGCGGGTAAACCCGCTCC < 2:402986/88‑1 CCGCTCCTACCAGGTACCGCGTTTGCCTTGAACCCGGCGCGTCCCCTGTAGGAGCGGGTTTACCCGCGAATGGGCCGCAAAGCGGCCCCGCTAACTCAGGTCAGAAGTGAACC > 1:638229/1‑113 CCGCTCCTACCAGGTACCGCGTTTGCCTTGAACCCGGCGCGTCCCCTGTAGGAGCGGGTTTACCCGCGAATGGGCCGCAAAGCGGCCCCGCTAACTCAGGTCAGAAGTGAACC < 2:638229/113‑1 ACCAGGTACCGCGTTTGCCTTGAACCCGGCGCGTCCCCTGTAGGAGCGGGTTTACCCGCGAATGGGCCGCAAAGCGGCCCCGCTAACTCAGGTCAGAAGTGAAGCTTGACCAAGAAGCTCATGGGGTTCTGGTCGGTAGTGAAGGCATCG > 1:185982/1‑150 GTGGGTGTGGAGTATGACTACTGGAAGAACAAGTACGGCATCAAGGACAGCGATGCCTTCACTACCGACCAGAACACCATGAGCTTCTTGGTCAAGGTTCACTTCTGACCTGAGTTAGCGGGGCCGCTTTGCGGCCCATTCGCGGGTAAACCCGCTCCTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4884272‑4884432‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aacccgctcctacCAGGTACCGCGTTTGCCTTGAACCCGGCGCGTCCCCTGTAGGAGCGGGTTTACCCGCGAATGGGCCGCAAAGCGGCCCCGCTAACTCAGGTCAGAAGTGAACCTTGACCAAGAAGCTCATGGTGTTCTGGTCGGTAGTGAAGGCATCG < NC_002947/4884469‑4884322 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |